SSDB Best Search Result

Entry:roa:Pd630_LPD01627 (347 a.a.)
Name:putative DNA ligase

Search Result : 199 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
rha:RHA1_ro05107 possible DNA ligase (ATP), C-terminal             347     2331     0.988      347     
rer:RER_49760 ATP-dependent DNA ligase LigC                        348     1961     0.801      347     
mva:Mvan_5543 ATP dependent DNA ligase                             359     1570     0.656      352     
msm:MSMEG_6302 DNA ligase                                          348     1546     0.645      349     
gpo:GPOL_c47210 ATP-dependent DNA ligase                           356     1465     0.619      349     
mmi:MMAR_5266 ATP-dependent DNA ligase LigC                        358     1296     0.573      361     
sco:SCO6707 putative DNA ligase                                    355     1293     0.574      364     
kfl:Kfla_3309 ATP dependent DNA ligase                             354     1286     0.569      360     
sma:SAVERM_1697 putative DNA ligase                                356     1277     0.570      363     
sct:SCAT_5513 ATP-dependent DNA ligase                             359     1269     0.568      361     
mul:MUL_4340 ATP-dependent DNA ligase LigC                         358     1265     0.565      361     
nca:Noca_0907 ATP dependent DNA ligase                             366     1248     0.545      365     
sro:Sros_6710 ATP-dependent DNA ligase                             346     1241     0.569      353     
mtu:Rv3731 DNA ligase C                                            358     1241     0.549      366     
mtc:MT3836 DNA ligase, putative                                    358     1241     0.549      366     
sgu:SGLAU_28040 ATP-dependent DNA ligase                           350     1212     0.555      357     
stp:Strop_1546 ATP dependent DNA ligase                            369     1198     0.526      361     
sgr:SGR_1024 putative DNA ligase                                   353     1192     0.536      366     
ase:ACPL_7071 ATP-dependent DNA ligase                             355     1179     0.536      360     
mab:MAB_0279c Probable DNA ligase LigC                             343     1154     0.533      351     
amd:AMED_2669 ATP-dependent DNA ligase                             359     1129     0.536      364     
sen:SACE_1861 putative ATP-dependent DNA ligase                    370     1122     0.522      366     
nfa:NFA_25600 putative ATP-dependent DNA ligase                    362     1106     0.510      363     
ccyc:SCMU_06830 hypothetical protein                               727     1083     0.496      369     
mlo:mll8063 similar to ATP-dependent DNA ligase                    338      903     0.457      339     
sme:SM_b20008 DNA ligase (ATP)                                     355      830     0.419      339     
ssy:SLG_10370 putative DNA ligase                                  345      814     0.416      334     
bja:blr5213 ORF_ID:blr5213; hypothetical protein                   338      733     0.387      328     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      453     0.314      331     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      435     0.333      330     
atu:Atu5097 ATP-dependent DNA ligase                    K01971     350      419     0.300      327     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      397     0.302      331     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      377     0.271      328     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      375     0.300      330     
scl:sce3523 unnamed protein product; High confidence in K01971     762      373     0.313      342     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      372     0.315      308     
dsy:DSY0616 hypothetical protein                        K01971     818      364     0.283      325     
afu:AF_1725 DNA ligase, putative                        K01971     313      364     0.308      328     
ret:RHE_PE00251 putative DNA ligase (ATP) protein       K01971     354      363     0.292      277     
swi:Swit_5282 DNA ligase D                              K01971     658      360     0.287      335     
pab:PAB2002 lig DNA ligase                              K10747     559      358     0.263      361     
ton:TON_1515 thermostable DNA ligase                    K10747     562      356     0.284      341     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      353     0.294      327     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      351     0.300      353     
pfu:PF1635 DNA ligase (lig)                             K10747     561      350     0.279      358     
rle:pRL110115 putative DNA ligase                       K01971     346      348     0.259      313     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      348     0.286      343     
phe:Phep_1702 DNA ligase D                              K01971     877      344     0.283      332     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      340     0.290      334     
cpy:Cphy_1729 DNA ligase D                              K01971     813      339     0.271      321     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      339     0.298      325     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      339     0.265      358     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      338     0.312      340     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      337     0.279      326     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      335     0.282      341     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      328     0.270      319     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      326     0.291      326     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      324     0.281      327     
hal:VNG_0881G DNA ligase                                K10747     561      318     0.301      342     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      315     0.286      336     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      315     0.312      346     
ppu:PP_3260 DNA ligase D                                K01971     833      311     0.269      327     
mth:MTH_1580 DNA ligase                                 K10747     561      301     0.295      308     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      297     0.267      322     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      291     0.276      352     
xau:Xaut_4365 DNA ligase D                              K01971     886      287     0.260      346     
hma:rrnAC0463 DNA ligase                                K10747     554      287     0.283      336     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      284     0.272      324     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      280     0.279      337     
rpa:TX73_004135 ATP-dependent DNA ligase                           621      269     0.306      356     
sno:Snov_0819 DNA ligase D                              K01971     842      266     0.283      325     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      266     0.245      355     
hth:HTH_1466 DNA ligase                                            572      265     0.272      302     
pde:Pden_0412 ATP dependent DNA ligase                             514      262     0.276      340     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      258     0.238      361     
mac:MA_0728 DNA ligase (ATP)                                       580      258     0.266      368     
mcc:715181 DNA ligase 3                                 K10776    1009      257     0.285      333     
aae:aq_1394 DNA ligase (ATP dependent)                             585      257     0.277      358     
hsa:3980 DNA ligase 3 isoform alpha precursor           K10776    1009      256     0.280      332     
ptr:454581 DNA ligase 3 isoform X2                      K10776     949      256     0.280      332     
pjd:Pjdr2_1127 ATP dependent DNA ligase                            287      255     0.286      217     
sto:STK_02230 DNA ligase                                K10747     600      255     0.237      350     
fca:101097931 DNA ligase 3 isoform X1                   K10776    1007      253     0.282      333     
mtr:11410741 DNA ligase 1 isoform X1                               773      252     0.269      357     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      252     0.280      339     
bta:514719 DNA ligase 3                                 K10776     943      252     0.281      292     
tac:Ta1148 DNA ligase related protein                   K10747     588      252     0.259      355     
ocu:100344941 DNA ligase 3 isoform X1                   K10776    1046      251     0.276      333     
gga:417530 DNA ligase 3                                 K10776    1008      251     0.280      339     
cpoc:100716163 DNA ligase 3 isoform X3                  K10776    1008      250     0.276      333     
clv:102083602 DNA ligase 3                              K10776     994      250     0.280      339     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      250     0.274      358     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      250     0.260      346     
apla:101797881 DNA ligase 3 isoform X1                  K10776     980      249     0.277      339     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      249     0.230      352     
rfq:117012947 DNA ligase 3 isoform X1                   K10776    1015      248     0.276      333     
cfa:491145 DNA ligase 3 isoform X1                      K10776     991      248     0.275      353     
dne:112987312 DNA ligase 3                              K10776     992      247     0.277      339     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      246     0.252      357     
cjc:100405358 DNA ligase 3 isoform X4                   K10776     954      246     0.279      333     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      245     0.247      320     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      245     0.254      331     
mdo:100021775 DNA ligase 3                              K10776    1005      244     0.274      339     
ssc:100626381 DNA ligase 3                              K10776     995      244     0.278      291     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      244     0.253      352     
cge:100765011 DNA ligase 3 isoform X1                   K10776    1014      243     0.284      292     
rno:303369 DNA ligase 3 isoform 1                       K10776    1002      243     0.278      353     
oas:101113866 DNA ligase 3 isoform X1                   K10776    1002      242     0.277      292     
pto:PTO0672 DNA ligase                                  K10747     590      242     0.263      365     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      242     0.256      356     
ecb:100071671 DNA ligase 3 isoform X3                   K10776     954      241     0.268      332     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      240     0.257      366     
cne:CNI04170 DNA ligase, putative                       K10747     803      240     0.261      375     
zga:ZOBELLIA_2113 DNA ligase                                       554      239     0.265      340     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      239     0.260      361     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      239     0.242      351     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      239     0.243      358     
pmur:107288940 DNA ligase 3                             K10776     984      238     0.271      339     
ptex:113441537 DNA ligase 3 isoform X1                  K10776     984      236     0.271      339     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      235     0.326      184     
sot:102603887 DNA ligase 1                                        1441      234     0.243      370     
ame:413086 DNA ligase 3 isoform X1                      K10776    1117      234     0.269      335     
nve:5509532 DNA ligase 3                                K10776     946      234     0.271      255     
xtr:549105 DNA ligase 3                                 K10776     893      233     0.260      369     
ath:AT1G08130 DNA ligase 1                              K10747     790      233     0.260      358     
vvi:100256907 DNA ligase 1                              K10747     782      231     0.255      365     
mmu:16882 DNA ligase 3 isoform a                        K10776    1012      231     0.275      353     
dre:563276 DNA ligase 3 isoform X1                      K10776    1011      231     0.267      292     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      230     0.297      266     
tca:658633 DNA ligase                                   K10747     756      229     0.260      361     
sly:101249429 DNA ligase 6 isoform X1                             1441      228     0.241      370     
rcu:8275235 DNA ligase 1                                K10747     796      228     0.273      359     
cin:100181519 DNA ligase 1-like                         K10747    1060      228     0.274      361     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      228     0.238      353     
amj:102572799 DNA ligase 3                              K10776     906      225     0.269      335     
tru:101068311 DNA ligase 3                              K10776     998      225     0.277      292     
gmx:100783155 DNA ligase 1                              K10747     776      225     0.254      358     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      225     0.277      358     
xom:XOO1771 DNA ligase                                             534      225     0.275      327     
ola:101156760 DNA ligase 3                              K10776    1011      224     0.271      292     
smo:SELMODRAFT_97261 hypothetical protein                          620      224     0.258      364     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      224     0.249      358     
ppp:112290811 DNA ligase 1                              K10747     776      224     0.271      362     
spu:581252 DNA ligase 3                                 K10776    1049      224     0.272      313     
nta:107805422 DNA ligase 6 isoform X1                             1426      223     0.239      373     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      223     0.276      232     
cit:102628869 DNA ligase 1                              K10747     806      222     0.251      358     
csv:101213447 DNA ligase 1                              K10747     801      222     0.267      360     
xla:398275 ligase III, DNA, ATP-dependent L homeolog    K10776     988      222     0.257      369     
mdm:103423359 DNA ligase 1-like                         K10747     796      218     0.255      357     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806      215     0.295      254     
pai:PAE0833 DNA ligase                                  K10747     584      213     0.249      350     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      212     0.276      348     
oih:OB3034 hypothetical conserved protein               K01971     595      211     0.248      250     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      209     0.272      390     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      209     0.243      358     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      207     0.251      375     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      202     0.268      254     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      202     0.240      359     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      198     0.283      300     
pti:PHATR_51005 hypothetical protein                    K10747     651      197     0.260      384     
yli:2908208 DNA ligase 1                                K10747     711      196     0.233      352     
ehi:EHI_111060 DNA ligase                               K10747     685      191     0.235      353     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      191     0.265      306     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      187     0.247      360     
pif:PITG_04709 DNA ligase, putative                               3896      186     0.265      374     
tcr:506835.120 DNA ligase I                             K10747     701      178     0.235      366     
tps:THAPSDRAFT_268404 ligase                            K10747     633      177     0.242      380     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      175     0.231      364     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      174     0.243      367     
aga:1271687 DNA ligase 4                                K10777     914      172     0.245      392     
tgo:TGME49_208580 DNA ligase 1, putative                K10747    1331      170     0.262      359     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      170     0.244      369     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      170     0.242      355     
maj:MAA_04574 hypothetical protein                                 871      166     0.259      212     
tva:5466150 DNA ligase 1/3 family member family                    679      165     0.249      333     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      164     0.281      249     
mgr:MGG_12899 DNA ligase 4                              K10777    1001      164     0.253      384     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      164     0.223      363     
ncr:NCU09706 DNA ligase I                                          917      160     0.244      246     
gla:GL50803_007649 DNA ligase (ATP)                                810      159     0.230      379     
fvr:FVEG_04990 DNA ligase 1                                        879      158     0.255      212     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      156     0.247      365     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      155     0.244      369     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      147     0.230      383     
fgr:FGSG_05453 DNA ligase                               K10747     867      147     0.235      383     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      146     0.235      366     
aor:AO090120000322 unnamed protein product; ATP-depende K10777    1006      144     0.260      281     
cau:Caur_0020 phosphonate ABC transporter, periplasmic             305      140     0.291      251     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      139     0.258      233     
csa:Csal_2163 SSU ribosomal protein S1P                 K02945     559      137     0.233      249     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      131     0.232      168     
ani:ANIA_04883 hypothetical protein                                816      127     0.234      201     
vfi:VF_1450 DNA ligase                                  K26441     285      125     0.229      253     
smm:Smp_019840.1 DNA ligase I, putative                            783      123     0.239      285     
pmr:PMI2601 putative siderophore biosynthetic protein   K04785     362      114     0.262      122     
bhe:BH15030 Extragenic suppressor protein suhB          K01092     263      114     0.283      106     
vch:VC_1542 DNA ligase                                  K26441     282      114     0.243      235     
cth:Cthe_1258 copper amine oxidase-like domain-containi            259      112     0.262      183     

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