SSDB Best Search Result

Entry:sda:GGS_0643 (829 a.a.)
Name:ATP-dependent DNA helicase
KO:K03722 ATP-dependent DNA helicase DinG
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Search Result : 204 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
spy:SPy_0649 putative ATP-dependent DNA helicase        K03722     833     4295     0.789      825     
smu:SMU_1313c putative ATP-dependent DNA helicase; DNA  K03722     820     3009     0.570      824     
spn:SP_0802 DNA polymerase III, epsilon subunit/ATP-dep K03722     816     2344     0.466      813     
spr:spr0711 ATP-dependent DNA helicase                  K03722     816     2328     0.464      813     
llm:llmg_2021 Probable ATP-dependent helicase dinG homo K03722     791     1838     0.389      822     
lla:L0284 ATP-dependent helicase DinG                   K03722     794     1825     0.387      826     
efa:EF2374 DNA polymerase III, epsilon subunit/ATP-depe K03722     929     1150     0.292      921     
lpl:lp_1737 ATP-dependent helicase DinG                 K03722     934     1073     0.307      916     
lin:dinG similar to ATP-dependent helicases             K03722     928     1061     0.301      931     
lmo:lmo1899 bifunctional ATP-dependent DNA helicase/DNA K03722     928     1056     0.299      932     
lcb:LCABL_17100 ATP-dependent helicase DinG             K03722     928     1038     0.295      907     
btk:BT9727_1424 ATP-dependent DNA helicase              K03722     934     1035     0.298      917     
ban:BA_1565 putative DnaQ family exonuclease/DinG famil K03722     934     1027     0.297      918     
ljo:LJ_1202 hypothetical protein                        K03722     938      975     0.300      919     
bsu:BSU22400 ATP-dependent helicase DinG                K03722     931      973     0.273      907     
sao:SAOUHSC_01472 DnaQ family exonuclease/DinG family h K03722     897      920     0.281      877     
sau:SA1288 probable ATP-dependent DNA helicase dinG     K03722     897      920     0.281      877     
ser:SERP1025 DNA polymerase III, epsilon subunit/ATP-de K03722     902      876     0.279      881     
cau:Caur_1621 DNA polymerase III, epsilon subunit       K02342     951      799     0.263      933     
mta:Moth_1154 DNA polymerase III, epsilon subunit       K03722     921      692     0.252      905     
son:SO_2081 ATP-dependent helicase DinG family          K03722     633      519     0.256      605     
rso:RSc1626 probable atp-dependent dna helicase-related K03722     713      514     0.276      659     
pmu:PM0710 Dnt                                          K03722     647      505     0.265      623     
eca:ECA2375 putative ATP-dependent helicase             K03722     639      497     0.249      610     
ddd:Dda3937_03716 conserved protein with nucleoside tri K03722     668      489     0.244      622     
lpn:lpg1922 ATP dependent DNA helicase (DEAD box family K03722     666      488     0.259      622     
smar:SM39_2235 probable ATP-dependent helicase          K03722     638      480     0.261      618     
bxe:Bxe_A1612 Putative ATP-dependent helicase           K03722     751      479     0.263      615     
hin:HI_0387 ATP-dependent helicase (dinG)               K03722     640      477     0.254      634     
seo:STM14_2203 putative DNA helicase                    K03722     636      474     0.255      623     
sty:STY1951 putative ATP-dependent helicase             K03722     636      474     0.255      623     
stm:STM1821 putative DNA helicase                       K03722     636      474     0.255      623     
bma:BMA1326 ATP-dependent helicase, putative            K03722     752      473     0.278      611     
bps:BPSL1530 putative ATP-dependent DNA helicase-relate K03722     686      473     0.278      611     
yps:YPTB2054 putative DEAD box family helicase          K03722     634      471     0.254      613     
ypk:y2239 putative enzyme                               K03722     634      468     0.253      613     
ype:YPO2071 putative DEAD box family helicase           K03722     634      468     0.253      613     
tth:TT_P0128 hypothetical protein                       K03654    1649      467     0.244      930     
cro:ROD_18471 putative ATP-binding protein              K03722     636      466     0.252      623     
vvu:VV1_0141 DinG family ATP-dependent helicase YoaA    K03722     639      466     0.246      619     
sfl:SF1420 hypothetical protein                         K03722     636      466     0.257      623     
ecs:ECs_2517 ATP-dependent helicase                     K03722     636      466     0.257      623     
ece:Z2851 putative enzyme                               K03722     636      466     0.257      623     
vch:VC_1990 ATP-dependent helicase, DinG family         K03722     646      464     0.246      627     
enc:ECL_01495 putative ATP-dependent helicase           K03722     636      463     0.248      624     
eco:b1808 putative ATP-dependent 5' to 3' DNA helicase  K03722     636      463     0.257      623     
ecj:JW1797 conserved hypothetical protein with nucleosi K03722     636      463     0.257      623     
reh:H16_A1432 Putative ATP-dependent helicase           K03722     711      460     0.256      644     
xac:XAC3107 ATP-dependent helicase                      K03722     674      456     0.255      638     
xom:XOO1642 ATP-dependent helicase                      K03722     675      454     0.257      630     
kpn:KPN_02325 putative ATP-dependent helicase, SOS repa K03722     636      452     0.249      615     
hdu:HD_1287 probable ATP-dependent helicase             K03722     639      449     0.242      631     
xcc:XCC2930 ATP-dependent helicase                      K03722     668      444     0.258      633     
eam:EAMY_2007 probable ATP-dependent helicase dinG homo K03722     636      441     0.249      614     
apl:APL_0781 putative ATP-dependent helicase            K03722     640      436     0.261      628     
vg:29125325 Bacillus phage SP-15; DNA helicase                     678      431     0.222      640     
yen:YE2378 putative DEAD box family helicase            K03722     608      424     0.249      599     
eba:ebA6678 ATP-dependent DNA helicase-related protein  K03722     651      423     0.253      628     
lil:LA_1875 ATP-dependent helicase                      K03722     658      423     0.242      648     
vpa:VP0865 ATP-dependent helicase, DinG family          K03722     636      421     0.247      628     
vfi:VF_1713 conserved protein with nucleoside triphosph K03722     652      420     0.242      625     
bpe:BP1145 probable ATP-dependent helicase              K03722     691      420     0.254      657     
gvi:gll0614 ORF_ID:gll0614; similar to ATP-dependent he            719      419     0.241      639     
xfa:XF_0882 ATP-dependent helicase                      K03722     708      413     0.250      621     
mca:MCA1991 putative ATP-dependent helicase             K03722     645      410     0.255      619     
cdi:DIP1859 DeaD/DeaH family helicase                   K03722     649      392     0.237      624     
fnu:FN0743 ATP-dependent helicase, DinG family          K03722     741      380     0.233      687     
bce:BC3816 DNA polymerase III alpha subunit             K03763    1435      364     0.332      199     
fps:FP1915 Probable DNA polymerase III subunit          K02342     453      360     0.370      162     
sma:SAVERM_2464 putative ATP-dependent helicase         K03722     677      360     0.226      628     
sgr:SGR_1718 putative ATP-dependent helicase            K03722     656      347     0.233      627     
sco:SCO5802 putative ATP-dependent helicase             K03722     664      346     0.216      629     
cdf:CD630_13050 PolIII (PolC) alpha subunit             K03763    1432      345     0.343      166     
aae:aq_358 ATP-dependent helicase (DinG family)         K03722     642      345     0.245      652     
pst:PSPTO_4120 ATP-dependent helicase, DinG family      K03722     714      344     0.260      650     
ppu:PP_1125 putative Helicase                           K03722     714      342     0.365      170     
psb:Psyr_3856 Helicase c2                               K03722     714      339     0.257      650     
sgu:SGLAU_25005 putative ATP-dependent helicase         K03722     658      336     0.227      621     
avn:Avin_19450 ATP-dependent helicase                   K03722     714      336     0.347      170     
gsu:GSU0363 ATP-dependent DNA helicase DinG             K03722     840      336     0.245      714     
pae:PA1045 ATP-dependent DNA helicase DinG              K03722     714      335     0.365      170     
mab:MAB_1471c Probable ATP-dependent helicase DinG      K03722     652      334     0.245      624     
mtu:Rv1329c ATP-dependent helicase DinG                 K03722     664      332     0.233      639     
mtc:MT1371 ATP-dependent helicase DinG                  K03722     664      332     0.233      639     
ksk:KSE_53840 putative ATP-dependent helicase           K03722     696      331     0.227      662     
sct:SCAT_4574 putative ATP-dependent helicase dinG homo K03722     658      326     0.232      660     
hth:HTH_0834 ATP-dependent helicase                     K03722     629      326     0.216      621     
msm:MSMEG_4912 putative helicase                        K03722     683      324     0.240      658     
nme:NMB1451 DNA polymerase III, epsilon subunit         K02342     470      319     0.305      177     
rha:RHA1_ro01444 probable ATP-dependent helicase        K03722     682      318     0.254      646     
amd:AMED_2206 DNA polymerase III subunit epsilon        K02342     567      316     0.302      278     
cgl:Cgl2519 Rad3-related DNA helicases                  K03722     580      315     0.244      558     
cac:CA_C3442 DNA polymerase III (alpha subunit)         K03763    1452      315     0.309      178     
cpe:CPE1691 DNA polymerase III alpha subunit            K03763    1449      313     0.327      165     
rsp:RSP_0572 putative exonuclease                       K02342     695      307     0.346      179     
tde:TDE_1990 ATP-dependent helicase, DinG family        K03722     709      307     0.203      656     
cbo:CBO2423 DNA polymerase III PolC-type                K03763    1432      301     0.310      174     
pde:Pden_4556 DNA polymerase III, epsilon subunit       K02342     659      286     0.311      193     
cje:Cj0452 DNA polymerase III subunit epsilon           K02342     253      261     0.337      163     
tma:TM0576 DNA polymerase III, alpha subunit            K03763    1367      260     0.287      188     
ngo:NGO_1708 ATP-dependent DNA helicase DinG            K03722     716      258     0.306      180     
tpa:TP_0643 DNA polymerase III, subunit epsilon (dnaQ)  K02342     215      255     0.287      174     
hpy:HP_1387 DNA polymerase III epsilon subunit (dnaQ)   K02342     350      246     0.305      174     
hpj:jhp_1438 DNA POLYMERASE III                         K02342     323      246     0.310      174     
tko:TK0784 ERCC2/XPD/Rad3-related DNA repair helicase   K10844     637      241     0.228      641     
sai:Saci_0192 XPD/Rad3 related DNA helicase             K10844     551      235     0.223      555     
bfr:BF2980 DNA polymerase III epsilon chain             K02342     257      234     0.299      177     
dra:DR_0856 DNA polymerase III, epsilon subunit, putati K02342     197      230     0.291      189     
afu:AF_0972 DNA polymerase III, subunit epsilon (dnaQ)  K02342     205      220     0.282      170     
blo:BL0071 possible exonuclease                         K02342     235      216     0.287      164     
bth:BT_1363 DNA Pol III Epsilon Chain                   K02342     277      213     0.250      264     
syf:Synpcc7942_0251 Exonuclease                         K02342     256      210     0.290      193     
syc:syc1262_c unknown protein                           K02342     256      210     0.290      193     
cpn:CPn_0410 DNA Polymerase III Epsilon Chain           K02342     237      209     0.297      145     
pfu:PF0933 DNA repair helicase rad3, putative           K10844     631      208     0.213      619     
ctb:CTL0513 DNA polymerase III, epsilon chain           K02342     232      203     0.272      206     
ctr:CT_261 DNA polymerase III subunit epsilon           K02342     232      203     0.272      206     
tac:Ta0057 DNA repair helicase Rad3 related protein     K10844     602      202     0.210      568     
cne:CNC05710 MipD, putative                             K18327     417      201     0.274      168     
rru:Rru_A3036 Helicase c2                               K03722     927      199     0.236      715     
ret:RHE_CH02833 probable DNA polymerase III, epsilon su K02342     196      198     0.270      178     
mpn:MPN_034 DNA polymerase III (dnaE) alpha chain       K03763    1443      198     0.282      181     
pai:PAE2991 conserved hypothetical protein              K10844     580      197     0.193      430     
ncr:NCU05217 RNA exonuclease 4                          K18327     406      192     0.291      179     
mge:MG_031 DNA polymerase III, alpha subunit, Gram-posi K03763    1451      192     0.262      172     
acb:A1S_1054 hypothetical protein                       K14159     497      190     0.284      148     
zma:100281609 uncharacterized protein LOC100281609                 499      189     0.258      244     
wol:WD_0108 DNA polymerase III, epsilon subunit         K02342     231      187     0.278      176     
ame:413245 RNA exonuclease 4 isoform X1                 K18327     293      186     0.279      172     
rno:311826 RNA exonuclease 4                            K18327     409      186     0.311      161     
aci:ACIAD1137 bifunctional protein [Includes: ribonucle K14159     450      185     0.277      148     
rcu:8263399 protein NEN1                                           448      184     0.252      282     
ssc:100626933 RNA exonuclease 4 isoform X1              K18327     426      182     0.291      182     
rle:RL3291 putative DNA polymerase/exonuclease          K02342     196      181     0.258      178     
tel:tlr1240 ORF_ID:tlr1240; hypothetical protein        K03722     490      181     0.241      212     
afm:AFUA_2G05560 exonuclease                            K18327     310      180     0.274      168     
fgr:FGSG_04253 RNA exonuclease 4                        K18327     319      177     0.293      164     
osa:4348592 protein NEN1                                           493      175     0.223      332     
ddi:DDB_G0287447 DNA polymerase III, epsilon subunit               483      175     0.256      164     
ccr:CC_0005 DNA polymerase III, epsilon subunit         K02342     237      175     0.255      220     
nmr:Nmar_0888 helicase c2                                          466      173     0.197      467     
bta:100140713 RNA exonuclease 4 isoform X1              K18327     410      173     0.273      161     
cit:102610895 protein NEN1-like                                    513      172     0.267      161     
sly:101261403 protein NEN1-like                                    471      172     0.285      172     
hsa:57109 REX4 homolog, 3'-5' exonuclease               K18327     422      172     0.263      179     
ath:AT1G74390 Polynucleotidyl transferase, ribonuclease            506      172     0.253      170     
mcc:713816 RNA exonuclease 4 isoform X1                 K18327     422      170     0.263      179     
bmf:BAB1_2072 Beta tubulin:DNA polymerase III, epsilon  K02342     234      169     0.257      191     
mmu:227656 REX4, 3'-5' exonuclease                      K18327     432      169     0.281      160     
bms:BR2071 DNA polymerase III, epsilon subunit          K02342     234      169     0.257      191     
vvi:100265514 protein NEN1                                         497      168     0.255      165     
rco:RC1112 DNA polymerase III epsilon chain             K02342     230      168     0.246      167     
bme:BMEI2056 DNA polymerase iii, epsilon chain          K02342     248      168     0.257      191     
aor:AO090001000667 unnamed protein product; 3'-5' exonu K18327     314      167     0.256      168     
cfa:491271 RNA exonuclease 4                            K18327     428      167     0.269      193     
sme:SMc02789 Probable DNA polymerase III, epsilon chain K02342     242      167     0.274      164     
rpr:RP732 DNA POLYMERASE III, EPSILON CHAIN (dnaQ)      K02342     229      167     0.235      166     
cte:CT1039 DNA polymerase III, epsilon subunit          K02342     232      167     0.247      182     
ani:ANIA_10955 hypothetical protein                     K18327     299      165     0.263      179     
tbr:Tb927.3.3090 helicase, putative                     K11136     963      164     0.231      160     
atu:Atu2077 DNA polymerase III, epsilon subunit         K02342     202      164     0.266      158     
mth:MTH_1347 probable ATP-dependent helicase                       584      163     0.215      543     
mlo:mlr4495 DNA polymerase III epsilon chain            K02342     240      163     0.268      164     
buc:BU248 DNA polymerase III epsilon chain              K02342     237      163     0.240      183     
rpa:TX73_001565 DNA polymerase III subunit epsilon      K02342     232      162     0.273      165     
mja:MJ_0942 ATP-dependent DNA helicase DinG, putative ( K03722     651      162     0.198      626     
ecb:100066519 RNA exonuclease 4 isoform X1              K18327     323      161     0.255      165     
tps:THAPSDRAFT_268896 predicted protein                 K12571     239      160     0.271      188     
mdm:103455375 protein NEN1-like                                    506      159     0.230      309     
csv:101203629 protein NEN1                                         505      159     0.261      161     
spo:2540203 exoribonuclease Rex4                        K18327     260      159     0.254      173     
ana:alr4075 hypothetical protein                        K03722     518      158     0.282      142     
ocu:100341245 dynein axonemal heavy chain 6             K10408    4158      157     0.222      522     
cal:CAALFM_C112440WA putative 3'-5' exonuclease         K18327     285      156     0.251      171     
npu:Npun_F1603 Exonuclease, RNase T and DNA polymerase             187      155     0.244      180     
bja:blr0640 DNA polymerase III epsilon chain            K02342     239      155     0.261      165     
sso:SSO0313 DNA helicase                                K10844     550      155     0.196      438     
dre:558447 interferon-stimulated 20 kDa exonuclease-lik K18329     321      152     0.251      171     
bmor:101746969 uncharacterized protein LOC101746969     K18327     329      151     0.227      181     
cre:CHLRE_11g480060v5 uncharacterized protein           K18327     579      151     0.253      162     
fca:101087017 RNA exonuclease 4 isoform X1              K18327     504      149     0.249      193     
mtr:25493835 protein NEN1                                          492      148     0.253      154     
mdo:100018503 REX4 homolog, 3'-5' exonuclease           K18327     425      148     0.242      182     
dme:Dmel_CG6833 uncharacterized protein, isoform B      K18327     290      146     0.223      175     
gmx:100818863 protein NEN1                                         501      144     0.257      152     
mba:Mbar_A1376 DNA helicase RepD                        K10844     773      144     0.233      313     
kla:KLLA0_E17865g uncharacterized protein               K18327     294      143     0.250      188     
cel:CELE_ZK1248.7 Piwi-like protein                                912      140     0.209      388     
sce:YER171W TFIIH/NER complex ATP-dependent 5'-3' DNA h K10844     778      139     0.242      149     
lma:LMJF_24_2280 putative DNA excision repair protein   K10844     813      138     0.257      105     
xtr:100487920 regulator of telomere elongation helicase K11136    1269      138     0.214      411     
tca:664442 probable ATP-dependent DNA helicase DDX11    K11273     818      137     0.242      120     
aga:1274731 RNA exonuclease 4                           K18327     223      136     0.231      182     
ape:APE_0322.1 putative DNA repair helicase Rad3        K10844     621      136     0.254      138     
mgr:MGG_04132 RNA exonuclease 4                         K18327     345      134     0.240      167     
ola:101161540 regulator of telomere elongation helicase K11136    1165      133     0.220      409     
hma:rrnAC2719 helicase                                  K10844     717      132     0.209      411     
gga:417153 RNA exonuclease 4                            K18327     441      131     0.262      103     
syn:slr1495 unknown protein                                        549      131     0.216      273     
hvo:HVO_1351 DNA repair helicase Rad3                   K10844     784      127     0.282      149     
pti:PHATRDRAFT_5546 hypothetical protein                           172      127     0.275      102     
aag:5571306 regulator of telomere elongation helicase 1 K11136    1010      125     0.265      136     
xla:734604 interferon stimulated exonuclease gene 20kDa K18329     369      122     0.228      167     
dvu:DVU_0443 exonulcease, putative                      K02342     244      106     0.238      172     

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