PATHWAY: char00230 Help
Entry
Name
Purine metabolism - Clupea harengus (Atlantic herring)
Class
Metabolism; Nucleotide metabolism
BRITE hierarchy
Pathway map
Ortholog table
Module
char_M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:char00230 ]
Other DBs
Organism
Clupea harengus (Atlantic herring) [GN:
char ]
Gene
105908112 hddc3; LOW QUALITY PROTEIN: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 [KO:K21138 ] [EC:3.1.7.2 ]
105910890 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A-like isoform X1 [KO:K13755 ] [EC:3.1.4.17 ]
105900639 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X1 [KO:K13755 ] [EC:3.1.4.17 ]
105906955 pde1cb; calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C [KO:K13755 ] [EC:3.1.4.17 ]
105905892 pde1a; calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X2 [KO:K13755 ] [EC:3.1.4.17 ]
105912947 pde6d; retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [KO:K13758 ]
105910165 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13759 ]
105910166 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13759 ]
105893597 pde6gb; phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b [KO:K13759 ]
105894971 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13759 ]
116219863 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13759 ]
105898575 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
105910162 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
105902979 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
116219862 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
105912775 pde9ac; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2 [KO:K13761 ] [EC:3.1.4.35 ]
105895300 pde9ab; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1 [KO:K13761 ] [EC:3.1.4.35 ]
105889902 entpd2a.2; ectonucleoside triphosphate diphosphohydrolase 2 [KO:K01509 ] [EC:3.6.1.-]
105902498 ectonucleoside triphosphate diphosphohydrolase 2 [KO:K01509 ] [EC:3.6.1.-]
105890112 pde7a; high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A isoform X1 [KO:K18436 ] [EC:3.1.4.53 ]
105889152 pde8a; high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A [KO:K18437 ] [EC:3.1.4.53 ]
Compound
C00053 3'-Phosphoadenylyl sulfate
C00054 Adenosine 3',5'-bisphosphate
C00119 5-Phospho-alpha-D-ribose 1-diphosphate
C00620 alpha-D-Ribose 1-phosphate
C00655 Xanthosine 5'-phosphate
C01228 Guanosine 3',5'-bis(diphosphate)
C01260 P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261 P1,P4-Bis(5'-guanosyl) tetraphosphate
C03373 Aminoimidazole ribotide
C03483 Adenosine tetraphosphate
C03614 Inosine 5'-tetraphosphate
C03794 N6-(1,2-Dicarboxyethyl)-AMP
C03838 5'-Phosphoribosylglycinamide
C04051 5-Amino-4-imidazolecarboxyamide
C04376 5'-Phosphoribosyl-N-formylglycinamide
C04392 P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494 Guanosine 3'-diphosphate 5'-triphosphate
C04640 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734 1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05515 5-Ureido-4-imidazole carboxylate
C05516 5-Amino-4-imidazole carboxylate
C06196 2'-Deoxyinosine 5'-phosphate
C06197 P1,P3-Bis(5'-adenosyl) triphosphate
C06433 5'-Benzoylphosphoadenosine
C06435 5'-Butyrylphosphoinosine
C12248 5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395 N6-Succino-2-amino-2'-deoxyadenylate
Reference
Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
Journal
Reference
Authors
Xi H, Schneider BL, Reitzer L.
Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
Journal
Related pathway
char00250 Alanine, aspartate and glutamate metabolism
char00260 Glycine, serine and threonine metabolism
char00630 Glyoxylate and dicarboxylate metabolism
KO pathway
LinkDB
All DBs