KEGG   PATHWAY: fve00040
Entry
fve00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Fragaria vesca (woodland strawberry)
Class
Metabolism; Carbohydrate metabolism
Pathway map
fve00040  Pentose and glucuronate interconversions
fve00040

Module
fve_M00081  Pectin degradation [PATH:fve00040]
Organism
Fragaria vesca (woodland strawberry) [GN:fve]
Gene
101299906  pectinesterase 4-like [KO:K01051] [EC:3.1.1.11]
101297879  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
101313085  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
101291210  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
101313376  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
101307093  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
101311252  pectinesterase [KO:K01051] [EC:3.1.1.11]
101298537  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
101311026  pectinesterase 31-like [KO:K01051] [EC:3.1.1.11]
101296228  pectinesterase PPME1-like [KO:K01051] [EC:3.1.1.11]
101295275  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
101309577  pectinesterase [KO:K01051] [EC:3.1.1.11]
101310153  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
101306089  pectinesterase 2-like [KO:K01051] [EC:3.1.1.11]
101297929  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
101292205  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
101298219  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
101309718  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
101293680  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
101308696  pectinesterase 31 [KO:K01051] [EC:3.1.1.11]
101294778  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
101306186  probable pectinesterase/pectinesterase inhibitor 25 [KO:K01051] [EC:3.1.1.11]
105353113  probable pectinesterase/pectinesterase inhibitor 60 [KO:K01051] [EC:3.1.1.11]
101298448  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
101298722  putative pectinesterase/pectinesterase inhibitor 22 [KO:K01051] [EC:3.1.1.11]
101291528  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
101291827  probable pectinesterase/pectinesterase inhibitor 20 [KO:K01051] [EC:3.1.1.11]
101292122  probable pectinesterase/pectinesterase inhibitor 41 [KO:K01051] [EC:3.1.1.11]
101298751  probable pectinesterase/pectinesterase inhibitor 47 [KO:K01051] [EC:3.1.1.11]
101304487  probable pectinesterase/pectinesterase inhibitor 12 [KO:K01051] [EC:3.1.1.11]
101300386  probable pectinesterase/pectinesterase inhibitor 17 [KO:K01051] [EC:3.1.1.11]
101294998  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
101292772  pectinesterase QRT1 [KO:K01051] [EC:3.1.1.11]
105352879  probable pectinesterase/pectinesterase inhibitor 36 [KO:K01051] [EC:3.1.1.11]
101301735  probable pectate lyase 20 [KO:K01728] [EC:4.2.2.2]
101291580  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
101300699  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
101314448  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
101295811  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
101310604  probable pectate lyase 3 [KO:K01728] [EC:4.2.2.2]
101314382  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
101304327  probable pectate lyase 13 [KO:K01728] [EC:4.2.2.2]
101291559  probable pectate lyase 12 [KO:K01728] [EC:4.2.2.2]
101298333  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
101312551  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
101315454  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
101310083  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
101293102  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
101291946  probable pectate lyase 15 [KO:K01728] [EC:4.2.2.2]
101293631  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
101291074  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
101304649  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101296237  polygalacturonase [KO:K01184] [EC:3.2.1.15]
101308325  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101308712  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101297807  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101298056  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
101296519  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101302685  polygalacturonase [KO:K01184] [EC:3.2.1.15]
101304682  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101302645  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101296139  polygalacturonase At1g48100 [KO:K01184] [EC:3.2.1.15]
101309075  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101293028  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101313046  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101303072  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101297017  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101297304  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
101297579  polygalacturonase [KO:K01184] [EC:3.2.1.15]
101298095  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
101291577  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101299084  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101291794  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101304714  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101305013  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101309590  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
105350095  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101302248  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101297522  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101295197  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101313285  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101301145  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
105350740  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
105350804  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101315325  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101296770  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101312527  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101311308  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101295263  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101302793  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
101298405  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
101312989  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
101304194  polygalacturonase At1g48100 [KO:K01213] [EC:3.2.1.67]
101309753  glucuronokinase 1 [KO:K16190] [EC:2.7.1.43]
101297604  UDP-sugar pyrophosphorylase [KO:K12447] [EC:2.7.7.64]
105350189  UDP-glucose 6-dehydrogenase 4-like [KO:K00012] [EC:1.1.1.22]
101311843  UDP-glucose 6-dehydrogenase 4-like [KO:K00012] [EC:1.1.1.22]
101291231  UDP-glucose 6-dehydrogenase 2 [KO:K00012] [EC:1.1.1.22]
101292899  UDP-glucose 6-dehydrogenase 5 [KO:K00012] [EC:1.1.1.22]
101291759  UDP-glucose 6-dehydrogenase 1-like [KO:K00012] [EC:1.1.1.22]
101297878  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
101292634  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
101302157  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
101308011  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
101308102  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
101308393  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
101309170  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
101310037  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
101298126  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
101291269  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
101294487  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
101314860  xylulose kinase-like [KO:K00854] [EC:2.7.1.17]
101306722  xylulose kinase-like [KO:K00854] [EC:2.7.1.17]
101300901  xylose isomerase [KO:K01805] [EC:5.3.1.5]
101305015  sorbitol dehydrogenase [KO:K00008] [EC:1.1.1.14]
101305313  sorbitol dehydrogenase-like [KO:K00008] [EC:1.1.1.14]
101300239  FGGY carbohydrate kinase domain-containing protein [KO:K00875] [EC:2.7.1.47]
101302040  uncharacterized LOC101302040 [KO:K22935] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
fve00010  Glycolysis / Gluconeogenesis
fve00020  Citrate cycle (TCA cycle)
fve00030  Pentose phosphate pathway
fve00052  Galactose metabolism
fve00053  Ascorbate and aldarate metabolism
fve00500  Starch and sucrose metabolism
fve00520  Amino sugar and nucleotide sugar metabolism
fve00561  Glycerolipid metabolism
fve00562  Inositol phosphate metabolism
fve00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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