Entry
Name
Autophagy - animal - Sinocyclocheilus anshuiensis
Description
Autophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily conserved among eukaryotes and exquisitely regulated. This progress initiates with production of the autophagosome, a double-membrane intracellular structure of reticular origin that engulfs cytoplasmic contents and ultimately fuses with lysosomes for cargo degradation. Autophagy is regulated in response to extra- or intracellular stress and signals such as starvation, growth factor deprivation and ER stress. Constitutive level of autophagy plays an important role in cellular homeostasis and maintains quality control of essential cellular components.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Sinocyclocheilus anshuiensis [GN:
sanh ]
Gene
107653898 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
107685965 LOW QUALITY PROTEIN: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
107695767 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
107655300 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform-like isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
107677508 pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922 ] [EC:2.7.1.153 ]
107681979 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
107675943 phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649 ]
107671741 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
107688475 phosphatidylinositol 3-kinase regulatory subunit gamma-like isoform X1 [KO:K02649 ]
107661887 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
107681053 phosphatidylinositol 3-kinase regulatory subunit alpha-like isoform X1 [KO:K02649 ]
107692397 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
107684350 phosphatidylinositol 3-kinase regulatory subunit alpha-like [KO:K02649 ]
107680216 phosphatidylinositol 3-kinase regulatory subunit beta-like [KO:K02649 ]
107704030 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like [KO:K15464 ]
107668598 bnip3; BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 [KO:K15464 ]
107671124 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like [KO:K15464 ]
107654565 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like isoform X1 [KO:K15464 ]
107653114 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like isoform X1 [KO:K15464 ]
107673035 DEP domain-containing mTOR-interacting protein-like isoform X1 [KO:K20402 ]
107685573 DEP domain-containing mTOR-interacting protein-like isoform X1 [KO:K20402 ]
107661685 ppp2ca; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [KO:K04382 ] [EC:3.1.3.16 ]
107663356 rb1cc1; RB1-inducible coiled-coil protein 1 isoform X1 [KO:K17589 ]
107660800 LOW QUALITY PROTEIN: autophagy-related protein 2 homolog A-like [KO:K17906 ]
107698028 autophagy-related protein 2 homolog A-like isoform X1 [KO:K17906 ]
107664023 autophagy-related protein 2 homolog B-like isoform X1 [KO:K17906 ]
107674704 WD repeat domain phosphoinositide-interacting protein 2-like [KO:K17908 ]
107688112 WD repeat domain phosphoinositide-interacting protein 1-like isoform X1 [KO:K17908 ]
107703413 WD repeat domain phosphoinositide-interacting protein 2 isoform X1 [KO:K17908 ]
107654490 WD repeat domain phosphoinositide-interacting protein 1-like isoform X1 [KO:K17908 ]
107670555 WD repeat domain phosphoinositide-interacting protein 3-like [KO:K22991 ]
107654004 WD repeat domain phosphoinositide-interacting protein 3 isoform X1 [KO:K22991 ]
107658559 WD repeat domain phosphoinositide-interacting protein 4 [KO:K22991 ]
107689948 WD repeat domain phosphoinositide-interacting protein 4-like [KO:K22991 ]
107674654 Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog [KO:K23611 ]
107692669 Smith-Magenis syndrome chromosomal region candidate gene 8-B protein homolog [KO:K23611 ]
107702539 LOW QUALITY PROTEIN: Smith-Magenis syndrome chromosomal region candidate gene 8-B protein homolog [KO:K23611 ]
107703424 Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog isoform X1 [KO:K23611 ]
107663824 TRAF family member-associated NF-kappa-B activator-like [KO:K12650 ]
107676285 TRAF family member-associated NF-kappa-B activator-like isoform X1 [KO:K12650 ]
107689308 beclin 1-associated autophagy-related key regulator-like [KO:K17889 ]
107693176 beclin 1-associated autophagy-related key regulator-like isoform X1 [KO:K17889 ]
107656180 activating molecule in BECN1-regulated autophagy protein 1-like isoform X1 [KO:K17985 ]
107670191 activating molecule in BECN1-regulated autophagy protein 1-like [KO:K17985 ]
107673272 activating molecule in BECN1-regulated autophagy protein 1-like [KO:K17985 ]
107668420 tumor protein p53-inducible nuclear protein 2-like isoform X1 [KO:K21247 ]
107669700 tumor protein p53-inducible nuclear protein 2-like isoform X1 [KO:K21247 ]
107701215 run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like [KO:K19330 ]
107679062 run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1 [KO:K19330 ]
107673508 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
107704056 eukaryotic translation initiation factor 2 subunit 1-like isoform X1 [KO:K03237 ]
107657741 eukaryotic translation initiation factor 2 subunit 1-like [KO:K03237 ]
107669459 eukaryotic translation initiation factor 2 subunit 1-like [KO:K03237 ]
107687320 atg7; ubiquitin-like modifier-activating enzyme ATG7 isoform X1 [KO:K08337 ]
107700204 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
107672985 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
107687670 gamma-aminobutyric acid receptor-associated protein-like [KO:K08341 ]
107672762 gamma-aminobutyric acid receptor-associated protein-like [KO:K08341 ]
107695954 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
107667682 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
107701141 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
107702025 microtubule-associated proteins 1A/1B light chain 3C-like isoform X1 [KO:K10435 ]
107680594 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
107685654 microtubule-associated proteins 1A/1B light chain 3A-like [KO:K10435 ]
107654145 microtubule-associated proteins 1A/1B light chain 3B-like [KO:K10435 ]
107694120 cysteine protease ATG4B-like isoform X1 [KO:K08342 ] [EC:3.4.22.-]
107696340 cysteine protease ATG4D-like isoform X1 [KO:K08342 ] [EC:3.4.22.-]
107692955 cysteine protease ATG4A-like isoform X1 [KO:K08342 ] [EC:3.4.22.-]
107666919 LOW QUALITY PROTEIN: next to BRCA1 gene 1 protein-like [KO:K17987 ]
107660853 calcium-binding and coiled-coil domain-containing protein 2-like [KO:K21348 ]
107692041 calcium-binding and coiled-coil domain-containing protein 2-like [KO:K21348 ]
107688347 LOW QUALITY PROTEIN: tax1-binding protein 1 homolog A-like [KO:K21347 ]
107671027 snap29; synaptosomal-associated protein 29 isoform X1 [KO:K08509 ]
107654030 pleckstrin homology domain-containing family M member 1-like [KO:K23282 ]
107664630 pleckstrin homology domain-containing family M member 1-like [KO:K23282 ]
107691631 vacuolar protein sorting-associated protein 11 homolog [KO:K20179 ]
107693978 vacuolar protein sorting-associated protein 11 homolog [KO:K20179 ]
107659985 vacuolar protein sorting-associated protein 16 homolog [KO:K20180 ]
107668247 vacuolar protein sorting-associated protein 18 homolog [KO:K20181 ]
107659178 vacuolar protein sorting-associated protein 18 homolog [KO:K20181 ]
107696497 vacuolar protein sorting-associated protein 41 homolog isoform X1 [KO:K20184 ]
107691426 vacuolar protein sorting-associated protein 41 homolog [KO:K20184 ]
107664338 lysosome-associated membrane glycoprotein 2-like isoform X1 [KO:K06528 ]
107658136 lysosome-associated membrane glycoprotein 2-like isoform X1 [KO:K06528 ]
Compound
C00350 Phosphatidylethanolamine
C01194 1-Phosphatidyl-D-myo-inositol
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Meijer AJ, Codogno P.
Title
Regulation and role of autophagy in mammalian cells.
Journal
Reference
Authors
Deretic V.
Title
Autophagy in innate and adaptive immunity.
Journal
Reference
Authors
Levine B, Yuan J.
Title
Autophagy in cell death: an innocent convict?
Journal
Reference
Authors
Tanida I, Ueno T, Kominami E.
Title
LC3 conjugation system in mammalian autophagy.
Journal
Reference
Authors
Lum JJ, DeBerardinis RJ, Thompson CB.
Title
Autophagy in metazoans: cell survival in the land of plenty.
Journal
Reference
Authors
Reggiori F, Klionsky DJ.
Title
Autophagosomes: biogenesis from scratch?
Journal
Reference
Authors
Klionsky DJ, Emr SD.
Title
Autophagy as a regulated pathway of cellular degradation.
Journal
Reference
Authors
Bechet D, Tassa A, Taillandier D, Combaret L, Attaix D.
Title
Lysosomal proteolysis in skeletal muscle.
Journal
Reference
Authors
He C, Klionsky DJ
Title
Regulation mechanisms and signaling pathways of autophagy.
Journal
Reference
Authors
Yang Z, Klionsky DJ
Title
An overview of the molecular mechanism of autophagy.
Journal
Reference
Authors
Yang Z, Klionsky DJ
Title
Mammalian autophagy: core molecular machinery and signaling regulation.
Journal
Reference
Authors
Chen Y, Klionsky DJ
Title
The regulation of autophagy - unanswered questions.
Journal
Reference
Authors
Mizushima N, Yoshimori T, Ohsumi Y
Title
The role of Atg proteins in autophagosome formation.
Journal
Reference
Authors
Russell RC, Yuan HX, Guan KL
Title
Autophagy regulation by nutrient signaling.
Journal
Reference
Authors
Noda NN, Fujioka Y
Title
Atg1 family kinases in autophagy initiation.
Journal
Related pathway
sanh04141 Protein processing in endoplasmic reticulum
KO pathway
LinkDB
All DBs