SSDB Best Search Result

Entry:rta:Rta_06880 (358 a.a.)
Name:ATP-dependent DNA ligase-like protein

Search Result : 219 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
amd:AMED_4148 ATP-dependent DNA ligase                             354     1472     0.598      353     
nfa:NFA_25600 putative ATP-dependent DNA ligase                    362     1436     0.588      354     
sct:SCAT_5513 ATP-dependent DNA ligase                             359     1366     0.562      352     
stp:Strop_1546 ATP dependent DNA ligase                            369     1350     0.559      358     
kfl:Kfla_3309 ATP dependent DNA ligase                             354     1334     0.552      355     
sgu:SGLAU_28040 ATP-dependent DNA ligase                           350     1326     0.547      351     
sma:SAVERM_1697 putative DNA ligase                                356     1302     0.532      355     
sco:SCO6707 putative DNA ligase                                    355     1295     0.537      354     
ase:ACPL_7071 ATP-dependent DNA ligase                             355     1277     0.528      356     
sgr:SGR_1024 putative DNA ligase                                   353     1277     0.528      352     
mva:Mvan_5549 ATP dependent DNA ligase                             360     1274     0.538      351     
mab:MAB_0279c Probable DNA ligase LigC                             343     1267     0.550      342     
nca:Noca_0907 ATP dependent DNA ligase                             366     1265     0.537      363     
msm:MSMEG_6304 DNA ligase                                          354     1258     0.538      344     
mmi:MMAR_5266 ATP-dependent DNA ligase LigC                        358     1247     0.533      353     
ccyc:SCMU_06830 hypothetical protein                               727     1243     0.525      360     
mtc:MT3836 DNA ligase, putative                                    358     1222     0.518      355     
mul:MUL_4340 ATP-dependent DNA ligase LigC                         358     1214     0.521      353     
mtu:Rv3731 DNA ligase C                                            358     1212     0.515      355     
sro:Sros_6710 ATP-dependent DNA ligase                             346     1196     0.518      353     
sen:SACE_1861 putative ATP-dependent DNA ligase                    370     1187     0.521      365     
rha:RHA1_ro05107 possible DNA ligase (ATP), C-terminal             347     1077     0.486      360     
rer:RER_49760 ATP-dependent DNA ligase LigC                        348     1047     0.480      358     
ssy:SLG_10370 putative DNA ligase                                  345     1002     0.480      344     
mlo:mll8063 similar to ATP-dependent DNA ligase                    338      991     0.467      345     
sme:SM_b20008 DNA ligase (ATP)                                     355      988     0.456      349     
gpo:GPOL_c47210 ATP-dependent DNA ligase                           356      918     0.442      362     
bja:blr5213 ORF_ID:blr5213; hypothetical protein                   338      893     0.435      336     
phe:Phep_1702 DNA ligase D                              K01971     877      454     0.307      352     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      444     0.317      341     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      429     0.300      357     
afu:AF_1725 DNA ligase, putative                        K01971     313      415     0.304      342     
scl:sce3523 unnamed protein product; High confidence in K01971     762      409     0.296      348     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      399     0.303      337     
dsy:DSY0616 hypothetical protein                        K01971     818      387     0.275      342     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      387     0.305      357     
swi:Swit_5282 DNA ligase D                              K01971     658      381     0.303      357     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      380     0.299      348     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      372     0.309      343     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      368     0.269      346     
reu:Reut_B3895 DNA ligase (ATP)                                    551      364     0.303      363     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      362     0.324      262     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      362     0.287      359     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      357     0.304      355     
sno:Snov_0819 DNA ligase D                              K01971     842      356     0.301      339     
xcc:XCC1290 DNA ligase                                             534      353     0.311      350     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      351     0.281      331     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771      348     0.301      332     
pab:PAB2002 lig DNA ligase                              K10747     559      345     0.303      287     
cpy:Cphy_1729 DNA ligase D                              K01971     813      344     0.256      344     
rle:pRL120229 putative DNA ligase family protein        K01971     881      343     0.281      345     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      341     0.311      270     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      339     0.292      346     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      337     0.311      267     
ret:RHE_PE00251 putative DNA ligase (ATP) protein       K01971     354      337     0.318      220     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      336     0.277      365     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      336     0.298      356     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      334     0.259      336     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      332     0.302      374     
pfu:PF1635 DNA ligase (lig)                             K10747     561      329     0.291      285     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      326     0.259      336     
xom:XOO1771 DNA ligase                                             534      326     0.295      325     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      323     0.299      274     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      314     0.290      341     
xau:Xaut_4365 DNA ligase D                              K01971     886      314     0.273      355     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      313     0.277      354     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      311     0.263      339     
ton:TON_1515 thermostable DNA ligase                    K10747     562      310     0.296      267     
hth:HTH_1466 DNA ligase                                            572      309     0.308      292     
ppu:PP_1105 putative DNA ligase, ATP-dependent                     552      308     0.302      328     
nta:107805422 DNA ligase 6 isoform X1                             1426      304     0.271      377     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      304     0.282      341     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      304     0.289      357     
rpa:TX73_004135 ATP-dependent DNA ligase                           621      299     0.289      367     
aae:aq_1394 DNA ligase (ATP dependent)                             585      298     0.269      342     
sot:102603887 DNA ligase 1                                        1441      295     0.269      379     
hma:rrnAC0463 DNA ligase                                K10747     554      294     0.271      325     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      293     0.270      300     
sto:STK_02230 DNA ligase                                K10747     600      293     0.261      371     
sly:101249429 DNA ligase 6 isoform X1                             1441      292     0.269      379     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      292     0.262      374     
mth:MTH_1580 DNA ligase                                 K10747     561      292     0.299      274     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      291     0.279      365     
smo:SELMODRAFT_97261 hypothetical protein                          620      291     0.274      387     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      291     0.282      365     
pai:PAE0833 DNA ligase                                  K10747     584      291     0.271      351     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      291     0.301      326     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      290     0.262      359     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      286     0.289      242     
pjd:Pjdr2_4984 ATP dependent DNA ligase                 K01971     316      284     0.272      272     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      279     0.278      299     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      279     0.256      359     
hal:VNG_0881G DNA ligase                                K10747     561      279     0.288      243     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      279     0.277      267     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806      272     0.277      343     
zga:ZOBELLIA_2113 DNA ligase                                       554      271     0.267      329     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      267     0.312      234     
cne:CNI04170 DNA ligase, putative                       K10747     803      266     0.281      363     
ath:AT1G66730 DNA LIGASE 6                                        1396      265     0.262      401     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      264     0.333      183     
vvi:100266816 DNA ligase 6 isoform X1                             1449      262     0.254      378     
pde:Pden_0412 ATP dependent DNA ligase                             514      260     0.287      359     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      253     0.252      270     
rcu:8265013 DNA ligase 6 isoform X1                               1394      252     0.251      398     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      252     0.278      400     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      252     0.265      370     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      252     0.274      361     
pto:PTO0672 DNA ligase                                  K10747     590      252     0.244      360     
tac:Ta1148 DNA ligase related protein                   K10747     588      251     0.244      353     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      250     0.274      361     
nve:5510104 DNA ligase 1                                K10747     959      249     0.262      362     
tcr:506835.120 DNA ligase I                             K10747     701      249     0.270      359     
pmur:107285325 DNA ligase 1                             K10747     944      247     0.267      360     
pif:PITG_04709 DNA ligase, putative                               3896      247     0.253      384     
mtr:11442607 DNA ligase 6 isoform X1                              1409      245     0.253      379     
mac:MA_2571 DNA ligase (ATP)                            K10747     568      245     0.238      353     
xla:397978 DNA ligase 1                                 K10747    1070      244     0.266      387     
dne:112995498 DNA ligase 1                              K10747     868      243     0.253      359     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      242     0.240      362     
yli:2908208 DNA ligase 1                                K10747     711      238     0.249      370     
tva:5466150 DNA ligase 1/3 family member family                    679      233     0.266      361     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      233     0.235      353     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      232     0.262      362     
cit:102628869 DNA ligase 1                              K10747     806      231     0.264      379     
gmx:100783155 DNA ligase 1                              K10747     776      231     0.274      368     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      230     0.266      372     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      230     0.256      359     
xtr:100271763 DNA ligase 1                              K10747    1040      229     0.247      385     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      229     0.238      353     
spu:581252 DNA ligase 3                                 K10776    1049      226     0.259      247     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      223     0.251      358     
osa:4324149 DNA ligase 6 isoform X1                               1404      221     0.265      392     
ola:101156760 DNA ligase 3                              K10776    1011      217     0.265      245     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      217     0.257      370     
ncr:NCU06481 DNA ligase                                 K10747     923      216     0.274      391     
csv:101213447 DNA ligase 1                              K10747     801      215     0.257      382     
cin:100170070 DNA ligase 3                              K10776     854      215     0.268      246     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      213     0.268      365     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      213     0.266      365     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      211     0.270      285     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      210     0.260      381     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      209     0.263      365     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      209     0.267      374     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      209     0.260      365     
cpoc:100734013 DNA ligase 1                             K10747     919      208     0.266      365     
amj:102566879 DNA ligase 1                              K10747     954      208     0.241      377     
bta:100124507 DNA ligase 1                              K10747     916      208     0.261      364     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      208     0.246      268     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      208     0.261      280     
tru:101068311 DNA ligase 3                              K10776     998      207     0.265      245     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      207     0.251      367     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      205     0.254      366     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      205     0.252      369     
dre:556995 DNA ligase 1                                 K10747    1058      205     0.245      364     
mgr:MGG_06370 DNA ligase 1                              K10747     896      204     0.264      390     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      203     0.258      364     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      203     0.262      366     
ani:ANIA_06069 hypothetical protein                     K10747     932      203     0.253      388     
mdm:103426184 DNA ligase 6                                        1407      202     0.241      378     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      202     0.272      389     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      201     0.265      374     
ssc:100520434 DNA ligase 1                              K10747     923      201     0.260      366     
tps:THAPSDRAFT_268404 ligase                            K10747     633      200     0.269      290     
aga:1271687 DNA ligase 4                                K10777     914      199     0.265      381     
mmu:16882 DNA ligase 3 isoform a                        K10776    1012      199     0.261      245     
rno:303369 DNA ligase 3 isoform 1                       K10776    1002      199     0.261      245     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      197     0.264      368     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      197     0.263      391     
tgo:7896565 DNA ligase 1, putative                                1331      197     0.254      334     
ppp:112290811 DNA ligase 1                              K10747     776      195     0.263      357     
fgr:FGSG_05453 DNA ligase                               K10747     867      195     0.269      391     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      195     0.253      364     
oih:OB3034 hypothetical conserved protein               K01971     595      195     0.247      255     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      194     0.258      384     
ame:413086 DNA ligase 3 isoform X1                      K10776    1117      194     0.258      248     
tca:658633 DNA ligase                                   K10747     756      194     0.240      379     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      192     0.261      299     
pti:PHATR_51005 hypothetical protein                    K10747     651      190     0.271      380     
mdo:100021775 DNA ligase 3                              K10776    1005      190     0.257      245     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      189     0.261      245     
ehi:EHI_111060 DNA ligase                               K10747     685      187     0.245      355     
clv:102083602 DNA ligase 3                              K10776     994      185     0.257      245     
bmor:101739679 DNA ligase 3                             K10776     998      177     0.255      282     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      167     0.272      184     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      165     0.235      361     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      164     0.251      255     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      162     0.289      253     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      161     0.229      353     
ser:SERP1534 DNA ligase, ATP-dependent                             432      148     0.245      273     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      142     0.272      250     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      142     0.299      97      
sfl:SF1068 dihydroorotase                               K01465     348      142     0.239      259     
vfi:VF_1450 DNA ligase                                  K26441     285      140     0.262      271     
eco:b1062 dihydroorotase                                K01465     348      140     0.239      259     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      139     0.265      253     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      139     0.261      226     
smm:Smp_019840.1 DNA ligase I, putative                            783      137     0.224      410     
ecs:ECs_1440 dihydroorotase                             K01465     348      137     0.239      259     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      137     0.245      208     
nme:NMB2048 DNA ligase                                  K26441     274      135     0.259      205     
sty:STY0649 conserved hypothetical protein                         411      133     0.228      268     
cja:CJA_3678 hypothetical protein                                 1252      132     0.358      95      
gla:GL50803_007649 DNA ligase (ATP)                                810      131     0.235      392     
yen:YE1625 dihydroorotase                               K01465     348      130     0.241      274     
gox:GOX2282 CTP synthase                                K01937     543      130     0.286      231     
vch:VC_1542 DNA ligase                                  K26441     282      130     0.272      206     
kpn:KPN_01074 dihydroorotase                            K01465     348      128     0.256      266     
ngo:NGO_2034 DNA ligase                                 K26441     274      128     0.259      205     
enc:ECL_02576 dihydroorotase                            K01465     348      127     0.242      264     
gsu:GSU1861 2-oxoacid:ferredoxin oxidoreductase, alpha  K00174     351      127     0.225      284     
stm:STM0605 putative 3'-phosphoadenosine 5'-phosphosulf            411      126     0.230      269     
yps:YPTB2482 dihydroorotase                             K01465     348      123     0.241      216     
ypk:y1746 dihydro-orotase                               K01465     348      123     0.241      216     
ype:YPO1587 dihydroorotase                              K01465     348      123     0.241      216     
cro:ROD_11221 dihydroorotase                            K01465     348      121     0.273      194     
vpa:VP1477 DNA ligase                                   K26441     280      121     0.256      258     
smar:SM39_1366 dihydroorotase                           K01465     348      115     0.235      234     
dde:Dde_2770 hypothetical protein                                  190      113     0.364      55      
afr:AFE_2598 hypothetical protein                                   36       73     0.257      35      

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