KEGG   PATHWAY: tsr04512
Entry
tsr04512                    Pathway                                
Name
ECM-receptor interaction - Thamnophis sirtalis (common garter snake)
Description
The extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell and tissue structure and function. Specific interactions between cells and the ECM are mediated by transmembrane molecules, mainly integrins and perhaps also proteoglycans, CD36, or other cell-surface-associated components. These interactions lead to a direct or indirect control of cellular activities such as adhesion, migration, differentiation, proliferation, and apoptosis. In addition, integrins function as mechanoreceptors and provide a force-transmitting physical link between the ECM and the cytoskeleton. Integrins are a family of glycosylated, heterodimeric transmembrane adhesion receptors that consist of noncovalently bound alpha- and beta-subunits.
Class
Environmental Information Processing; Signaling molecules and interaction
Pathway map
tsr04512  ECM-receptor interaction
tsr04512

Other DBs
GO: 0005201
Organism
Thamnophis sirtalis (common garter snake) [GN:tsr]
Gene
106537435  ITGB4; LOW QUALITY PROTEIN: integrin beta-4 [KO:K06525]
106537772  LAMA1; laminin subunit alpha-1 [KO:K05637]
106537905  ITGA8; LOW QUALITY PROTEIN: integrin alpha-8 [KO:K06584]
106538418  [KO:K06252]
106538546  COL4A4; collagen alpha-4(IV) chain [KO:K06237]
106539361  DAG1; dystroglycan [KO:K06265]
106539497  [KO:K04659]
106539620  COL2A1; collagen alpha-1(II) chain [KO:K19719]
106539665  LAMB3; laminin subunit beta-3 [KO:K06244]
106539713  SDC4; syndecan-4 [KO:K16338]
106540332  SV2A; LOW QUALITY PROTEIN: synaptic vesicle glycoprotein 2A [KO:K06258]
106541913  COL1A2; collagen alpha-2(I) chain [KO:K06236]
106542050  THBS1; thrombospondin-1 [KO:K16857]
106542467  ITGA6; integrin alpha-6 isoform X1 [KO:K06485]
106543154  HSPG2; basement membrane-specific heparan sulfate proteoglycan core protein [KO:K06255]
106543193  [KO:K06237]
106543632  TNC; tenascin [KO:K06252]
106544187  ITGB1; integrin beta-1 [KO:K05719]
106544267  ITGA1; integrin alpha-1 [KO:K06480]
106544514  FN1; fibronectin [KO:K05717]
106544690  CD47; leukocyte surface antigen CD47 [KO:K06266]
106544700  COL1A1; collagen alpha-1(I) chain [KO:K06236]
106544889  HMMR; hyaluronan mediated motility receptor [KO:K06267]
106545379  [KO:K06238]
106545544  NPNT; nephronectin isoform X1 [KO:K06824]
106546482  [KO:K06238]
106546485  [KO:K06238]
106546531  [KO:K05636]
106546653  DMP1; dentin matrix acidic phosphoprotein 1 [KO:K23328]
106546747  [KO:K19719]
106546748  [KO:K06238]
106546931  ITGB5; integrin beta-5 isoform X1 [KO:K06588]
106547333  COL9A2; collagen alpha-2(IX) chain [KO:K08131]
106548085  [KO:K06250]
106548113  ITGB3; integrin beta-3 [KO:K06493]
106548389  [KO:K03900]
106549255  LAMB2; laminin subunit beta-2 [KO:K06243]
106549569  [KO:K06237]
106549793  [KO:K04659]
106549873  [KO:K06258]
106550024  LAMA2; laminin subunit alpha-2 [KO:K05637]
106550350  COL4A1; collagen alpha-1(IV) chain [KO:K06237]
106550627  [KO:K06262]
106550889  THBS2; thrombospondin-2 [KO:K04659]
106550904  LAMC3; laminin subunit gamma-3 [KO:K06247]
106551612  ITGB6; integrin beta-6 isoform X1 [KO:K06589]
106551615  COL6A3; collagen alpha-3(VI) chain isoform X1 [KO:K06238]
106551746  [KO:K19719]
106551930  IBSP; bone sialoprotein 2 [KO:K06253]
106552079  ITGAV; integrin alpha-V [KO:K06487]
106552402  COL6A1; collagen alpha-1(VI) chain [KO:K06238]
106552584  ITGA9; integrin alpha-9 [KO:K06585]
106552663  CHAD; chondroadherin [KO:K06248]
106552708  LAMA4; laminin subunit alpha-4 [KO:K06241]
106552936  FREM1; FRAS1-related extracellular matrix protein 1 [KO:K23380]
106553602  CD44; CD44 antigen [KO:K06256]
106553638  [KO:K06240]
106553639  [KO:K06240]
106554044  [KO:K06243]
106554258  [KO:K06243]
106555225  [KO:K23380]
106555426  ITGA7; integrin alpha-7 isoform X1 [KO:K06583]
106555446  ITGA4; integrin alpha-4 [KO:K06483]
106556090  [KO:K06249] [EC:3.4.21.-]
106556290  GP1BA; platelet glycoprotein Ib alpha chain [KO:K06261]
106556503  [KO:K06587]
106557227  ITGB8; integrin beta-8 [KO:K06591]
106557240  ITGA2B; integrin alpha-IIb [KO:K06476]
106557334  ITGA3; integrin alpha-3 [KO:K06482]
Compound
G10505  Hyaluronic acid
Reference
  Authors
van der Flier A, Sonnenberg A.
  Title
Function and interactions of integrins.
  Journal
Cell Tissue Res 305:285-98 (2001)
DOI:10.1007/s004410100417
Reference
  Authors
Reddy KV, Mangale SS.
  Title
Integrin receptors: the dynamic modulators of endometrial function.
  Journal
Tissue Cell 35:260-73 (2003)
DOI:10.1016/S0040-8166(03)00039-9
Reference
  Authors
Milner R, Campbell IL.
  Title
The integrin family of cell adhesion molecules has multiple functions within the CNS.
  Journal
J Neurosci Res 69:286-91 (2002)
DOI:10.1002/jnr.10321
Reference
  Authors
Cichy J, Pure E.
  Title
The liberation of CD44.
  Journal
J Cell Biol 161:839-43 (2003)
DOI:10.1083/jcb.200302098
Reference
PMID:7698997
  Authors
Elenius K, Jalkanen M.
  Title
Function of the syndecans--a family of cell surface proteoglycans.
  Journal
J Cell Sci 107 ( Pt 11):2975-82 (1994)
Reference
  Authors
Son YJ, Scranton TW, Sunderland WJ, Baek SJ, Miner JH, Sanes JR, Carlson SS.
  Title
The synaptic vesicle protein SV2 is complexed with an alpha5-containing laminin on the nerve terminal surface.
  Journal
J Biol Chem 275:451-60 (2000)
DOI:10.1074/jbc.275.1.451
Reference
  Authors
Sid B, Sartelet H, Bellon G, El Btaouri H, Rath G, Delorme N, Haye B, Martiny L.
  Title
Thrombospondin 1: a multifunctional protein implicated in the regulation of tumor growth.
  Journal
Crit Rev Oncol Hematol 49:245-58 (2004)
DOI:10.1016/j.critrevonc.2003.09.009
Reference
  Authors
Canobbio I, Balduini C, Torti M.
  Title
Signalling through the platelet glycoprotein Ib-V-IX complex.
  Journal
Cell Signal 16:1329-44 (2004)
DOI:10.1016/j.cellsig.2004.05.008
Reference
  Authors
Nieswandt B, Brakebusch C, Bergmeier W, Schulte V, Bouvard D, Mokhtari-Nejad R, Lindhout T, Heemskerk JW, Zirngibl H, Fassler R.
  Title
Glycoprotein VI but not alpha2beta1 integrin is essential for platelet interaction with collagen.
  Journal
EMBO J 20:2120-30 (2001)
DOI:10.1093/emboj/20.9.2120
Reference
  Authors
Martin PT.
  Title
Dystroglycan glycosylation and its role in matrix binding in skeletal muscle.
  Journal
Glycobiology 13:55R-66R (2003)
DOI:10.1093/glycob/cwg076
Reference
  Authors
Toole BP.
  Title
Hyaluronan: from extracellular glue to pericellular cue.
  Journal
Nat Rev Cancer 4:528-39 (2004)
DOI:10.1038/nrc1391
Reference
  Authors
Bosman FT, Stamenkovic I.
  Title
Functional structure and composition of the extracellular matrix.
  Journal
J Pathol 200:423-8 (2003)
DOI:10.1002/path.1437
Reference
  Authors
van der Ven AT, Vivante A, Hildebrandt F
  Title
Novel Insights into the Pathogenesis of Monogenic Congenital Anomalies of the Kidney and Urinary Tract.
  Journal
J Am Soc Nephrol 29:36-50 (2018)
DOI:10.1681/ASN.2017050561
Related
pathway
tsr04510  Focal adhesion
KO pathway
ko04512   

DBGET integrated database retrieval system