SSDB Best Search Result

Entry:psee:FRP1_24830 (312 a.a.)
Name:DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 203 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      810     0.479      305     
nca:Noca_1235 ATP dependent DNA ligase                  K01971     311      782     0.444      311     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      774     0.458      319     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      773     0.453      318     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      773     0.453      318     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      769     0.455      319     
kfl:Kfla_4705 DNA polymerase LigD, ligase domain protei K01971     318      767     0.445      321     
ase:ACPL_520 DNA ligase (ATP)                           K01971     304      755     0.458      308     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      738     0.435      313     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      736     0.429      315     
msm:MSMEG_5570 DNA ligase                               K01971     755      726     0.438      313     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      725     0.450      320     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      709     0.437      325     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      696     0.429      312     
nfa:NFA_29400 putative ATP-dependent DNA ligase         K01971     320      647     0.401      317     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      645     0.416      308     
sgu:SGLAU_02470 ATP-dependent DNA ligase                K01971     326      644     0.416      317     
sgr:SGR_6690 putative ATP-dependent DNA ligase          K01971     320      633     0.401      317     
sco:SCO7345 probable ATP-dependent DNA ligase.          K01971     326      613     0.413      317     
sen:SACE_2706 ATP-dependent DNA ligase                  K01971     259      575     0.429      259     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      558     0.375      301     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      557     0.366      317     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      556     0.381      320     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      549     0.368      321     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      543     0.370      308     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      542     0.341      305     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      541     0.363      300     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      537     0.370      319     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      537     0.363      317     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      536     0.370      330     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771      535     0.382      317     
ssy:SLG_04290 putative DNA ligase                       K01971     835      533     0.371      307     
rle:pRL120229 putative DNA ligase family protein        K01971     881      533     0.360      297     
scl:sce3523 unnamed protein product; High confidence in K01971     762      527     0.371      321     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      526     0.348      313     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      521     0.366      306     
phe:Phep_1702 DNA ligase D                              K01971     877      516     0.338      325     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      515     0.373      319     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      509     0.340      318     
ppu:PP_3260 DNA ligase D                                K01971     833      505     0.352      318     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      504     0.370      303     
xau:Xaut_4365 DNA ligase D                              K01971     886      504     0.328      302     
rpa:TX73_018915 DNA ligase D                            K01971     914      504     0.353      309     
cpy:Cphy_1729 DNA ligase D                              K01971     813      502     0.354      308     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      500     0.358      321     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      498     0.350      309     
dsy:DSY0616 hypothetical protein                        K01971     818      497     0.329      307     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      497     0.366      320     
swi:Swit_3982 DNA ligase D                              K01971     837      483     0.343      315     
sno:Snov_0819 DNA ligase D                              K01971     842      477     0.351      319     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      477     0.335      316     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      476     0.350      314     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      473     0.344      323     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      462     0.341      299     
afu:AF_1725 DNA ligase, putative                        K01971     313      449     0.319      307     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      437     0.349      307     
sma:SAVERM_1p90 putative ATP-dependent DNA ligase                  325      435     0.349      324     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      425     0.302      311     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      415     0.348      282     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      414     0.320      378     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      409     0.300      310     
sro:Sros_6710 ATP-dependent DNA ligase                             346      392     0.325      332     
pfu:PF1635 DNA ligase (lig)                             K10747     561      339     0.283      332     
pjd:Pjdr2_1127 ATP dependent DNA ligase                            287      336     0.325      249     
pab:PAB2002 lig DNA ligase                              K10747     559      334     0.283      332     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      334     0.306      314     
hal:VNG_0881G DNA ligase                                K10747     561      323     0.320      331     
hma:rrnAC0463 DNA ligase                                K10747     554      319     0.309      324     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      315     0.274      332     
mac:MA_2571 DNA ligase (ATP)                            K10747     568      315     0.297      316     
ton:TON_1515 thermostable DNA ligase                    K10747     562      312     0.279      326     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      312     0.299      314     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      311     0.285      326     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      311     0.350      180     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      303     0.295      319     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      300     0.351      194     
cne:CNI04170 DNA ligase, putative                       K10747     803      300     0.291      347     
xom:XOO1771 DNA ligase                                             534      294     0.310      274     
pde:Pden_0412 ATP dependent DNA ligase                             514      293     0.314      318     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      291     0.311      267     
bsu:BSU20500 DNA ligase-like protein LigB                          270      290     0.313      201     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      289     0.312      327     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      287     0.262      328     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      286     0.295      285     
aae:aq_1394 DNA ligase (ATP dependent)                             585      286     0.282      330     
yli:2908208 DNA ligase 1                                K10747     711      283     0.280      329     
mth:MTH_1580 DNA ligase                                 K10747     561      282     0.299      314     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      276     0.301      229     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      274     0.289      343     
pai:PAE0833 DNA ligase                                  K10747     584      274     0.272      305     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      272     0.282      326     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      270     0.252      310     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      268     0.278      352     
tac:Ta1148 DNA ligase related protein                   K10747     588      263     0.289      291     
vvi:100266816 DNA ligase 6 isoform X1                             1449      262     0.273      363     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      261     0.272      356     
ncr:NCU06481 DNA ligase                                 K10747     923      259     0.268      358     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      258     0.268      343     
dre:563276 DNA ligase 3 isoform X1                      K10776    1011      255     0.295      264     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      255     0.304      260     
xla:398275 ligase III, DNA, ATP-dependent L homeolog    K10776     988      254     0.287      265     
ola:101156760 DNA ligase 3                              K10776    1011      253     0.299      264     
oih:OB3034 hypothetical conserved protein               K01971     595      253     0.269      264     
xtr:549105 DNA ligase 3                                 K10776     893      251     0.287      265     
pmur:107288940 DNA ligase 3                             K10776     984      249     0.292      264     
pto:PTO0672 DNA ligase                                  K10747     590      248     0.277      296     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      248     0.246      284     
ptex:113441537 DNA ligase 3 isoform X1                  K10776     984      247     0.292      264     
tgo:7896565 DNA ligase 1, putative                                1331      244     0.274      303     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      244     0.261      310     
tru:101068311 DNA ligase 3                              K10776     998      243     0.288      264     
zga:ZOBELLIA_2113 DNA ligase                                       554      243     0.281      192     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      243     0.269      349     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      241     0.251      307     
vfi:VF_1450 DNA ligase                                  K26441     285      240     0.320      225     
clv:102083602 DNA ligase 3                              K10776     994      239     0.296      274     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      239     0.256      312     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      237     0.265      358     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      237     0.259      343     
sto:STK_02230 DNA ligase                                K10747     600      235     0.252      286     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      234     0.273      326     
sot:102603887 DNA ligase 1                                        1441      233     0.274      325     
smo:SELMODRAFT_97261 hypothetical protein                          620      233     0.265      355     
nve:5525240 DNA ligase 4                                K10777     903      231     0.276      355     
sly:101249429 DNA ligase 6 isoform X1                             1441      230     0.274      325     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      229     0.251      354     
gga:417530 DNA ligase 3                                 K10776    1008      229     0.307      231     
cge:100765011 DNA ligase 3 isoform X1                   K10776    1014      228     0.292      267     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      228     0.285      274     
tva:5466150 DNA ligase 1/3 family member family                    679      228     0.267      318     
hth:HTH_1466 DNA ligase                                            572      227     0.256      316     
rno:303369 DNA ligase 3 isoform 1                       K10776    1002      227     0.292      267     
dne:112987312 DNA ligase 3                              K10776     992      226     0.303      231     
mdo:100021775 DNA ligase 3                              K10776    1005      226     0.284      268     
mgr:MGG_06370 DNA ligase 1                              K10747     896      226     0.255      298     
nta:107805422 DNA ligase 6 isoform X1                             1426      225     0.258      360     
mtr:11442607 DNA ligase 6 isoform X1                              1409      225     0.266      364     
tcr:506835.120 DNA ligase I                             K10747     701      225     0.242      326     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      225     0.253      348     
apla:101797881 DNA ligase 3 isoform X1                  K10776     980      224     0.303      231     
tps:THAPSDRAFT_268404 ligase                            K10747     633      224     0.273      355     
mmu:16882 DNA ligase 3 isoform a                        K10776    1012      224     0.310      232     
rfq:117012947 DNA ligase 3 isoform X1                   K10776    1015      223     0.289      263     
spu:581252 DNA ligase 3                                 K10776    1049      222     0.277      271     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      222     0.259      321     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806      222     0.276      326     
fca:101097931 DNA ligase 3 isoform X1                   K10776    1007      221     0.285      267     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      221     0.266      353     
ecb:100071671 DNA ligase 3 isoform X3                   K10776     954      220     0.288      267     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      220     0.242      326     
cfa:491145 DNA ligase 3 isoform X1                      K10776     991      220     0.273      267     
cpoc:100716163 DNA ligase 3 isoform X3                  K10776    1008      219     0.285      267     
ocu:100344941 DNA ligase 3 isoform X1                   K10776    1046      219     0.285      267     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      219     0.291      254     
bmor:101739679 DNA ligase 3                             K10776     998      218     0.284      292     
csv:101213447 DNA ligase 1                              K10747     801      218     0.267      337     
mcc:715181 DNA ligase 3                                 K10776    1009      217     0.287      268     
ptr:454581 DNA ligase 3 isoform X2                      K10776     949      217     0.287      268     
hsa:3980 DNA ligase 3 isoform alpha precursor           K10776    1009      216     0.287      268     
zma:103651343 DNA ligase 6                                        1397      216     0.261      326     
mdm:103426184 DNA ligase 6                                        1407      215     0.252      361     
cjc:100405358 DNA ligase 3 isoform X4                   K10776     954      214     0.284      268     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      214     0.268      313     
bta:100124507 DNA ligase 1                              K10747     916      214     0.268      313     
cit:102618631 DNA ligase 6 isoform X1                             1402      213     0.258      360     
gmx:100807673 DNA ligase 6 isoform X1                             1402      212     0.260      362     
fgr:FGSG_05453 DNA ligase                               K10747     867      212     0.258      360     
amj:102572799 DNA ligase 3                              K10776     906      210     0.295      268     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      210     0.263      338     
ssc:100520434 DNA ligase 1                              K10747     923      210     0.267      330     
tca:658633 DNA ligase                                   K10747     756      209     0.253      273     
ani:ANIA_06069 hypothetical protein                     K10747     932      209     0.271      373     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      209     0.259      351     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      208     0.237      355     
pti:PHATR_51005 hypothetical protein                    K10747     651      208     0.267      352     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      208     0.257      350     
ath:AT1G08130 DNA ligase 1                              K10747     790      208     0.281      327     
vch:VC_1542 DNA ligase                                  K26441     282      207     0.292      257     
rcu:8265013 DNA ligase 6 isoform X1                               1394      205     0.260      361     
cin:100170070 DNA ligase 3                              K10776     854      204     0.270      252     
pif:PITG_04709 DNA ligase, putative                               3896      203     0.247      365     
smm:Smp_019840.1 DNA ligase I, putative                            783      199     0.266      271     
aag:23687785 DNA ligase 4                               K10777     941      199     0.283      265     
ppp:112291880 DNA ligase 4                              K10777    1297      199     0.273      275     
osa:4324149 DNA ligase 6 isoform X1                               1404      192     0.253      324     
ame:413086 DNA ligase 3 isoform X1                      K10776    1117      190     0.283      293     
ehi:EHI_111060 DNA ligase                               K10747     685      188     0.246      313     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      185     0.253      328     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      180     0.309      230     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      177     0.290      283     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      177     0.296      240     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      176     0.254      319     
vpa:VP1477 DNA ligase                                   K26441     280      175     0.288      278     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      172     0.242      281     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      168     0.310      239     
ngo:NGO_2034 DNA ligase                                 K26441     274      144     0.248      258     
gla:GL50803_007649 DNA ligase (ATP)                                810      143     0.233      309     
nme:NMB2048 DNA ligase                                  K26441     274      142     0.248      258     
cps:CPS_4404 DNA ligase, ATP-dependent                  K26441     292      141     0.245      241     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      126     0.255      255     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      119     0.242      252     
ser:SERP1534 DNA ligase, ATP-dependent                             432      111     0.224      321     
syn:ssl5103 unknown protein                                         62       85     0.354      48      

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