SSDB Best Search Result

Entry:sho:SHJGH_3858 (1471 a.a.)
Name:hypothetical protein
KO:K08300 ribonuclease E
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Search Result : 205 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sgu:SGLAU_11855 ribonuclease E                          K08300    1463     5742     0.690      1529    
sco:SCO2599 conserved hypothetical protein SCC88.10c    K08300    1340     5583     0.709      1380    
sma:SAVERM_5465 hypothetical protein                    K08300    1387     5440     0.686      1436    
sgr:SGR_4940 hypothetical protein                       K08300    1415     4930     0.606      1499    
sct:SCAT_1637 conserved protein of unknown function     K08300    1243     4327     0.602      1391    
ksk:KSE_26080 putative ribonuclease                     K08300    1238     3887     0.555      1385    
rha:RHA1_ro01314 probable ribonuclease E/G              K08300    1134     2916     0.484      1168    
amd:AMED_6707 ribonuclease                              K08300     980     2765     0.512      989     
mab:MAB_1607 Possible ribonuclease E Rne                K08300     959     2616     0.502      975     
msm:MSMEG_4626 ribonuclease, Rne/Rng family protein     K08300    1037     2548     0.468      1079    
mtu:Rv2444c ribonuclease E                              K08300     953     2374     0.506      864     
mle:ML1468 possible ribonuclease                        K08300     924     2367     0.555      712     
blo:BL1281 ribonuclease G                               K08300    1003     2283     0.434      1025    
cdi:DIP1782 Putative RNA-associated protein             K08300     962     2199     0.460      894     
cgl:Cgl2364 Ribonucleases G and E                       K08300     756     1925     0.471      775     
mtc:MT2520 cytoplasmic axial filament protein, putative K08300     621     1906     0.619      501     
eba:ebA5441 ribonuclease E (RNase E)                    K08300    1007     1127     0.311      803     
gsu:GSU0921 ribonuclease, Rne/Rng family                K08300     808     1114     0.326      813     
ppu:PP_1905 ribonuclease E                              K08300    1091     1114     0.317      830     
pae:PA4477 cytoplasmic axial filament protein           K08301     485     1097     0.452      403     
pst:PSPTO_3841 ribonuclease, Rne/Rng family protein     K08300    1128     1094     0.320      759     
psb:Psyr_1638 RNAse E                                   K08300    1120     1092     0.314      758     
syf:Synpcc7942_0878 ribonuclease, Rne/Rng family        K08300     808     1088     0.308      829     
syc:syc0662_c ribonuclease E                            K08300     808     1088     0.308      829     
mta:Moth_0556 RNAse G                                   K08301     562     1071     0.410      417     
xcc:XCC2609 ribonuclease G                              K08301     499     1066     0.433      413     
rsp:RSP_2131 RNAse E                                    K08300     936     1056     0.347      720     
xom:XOO3130 ribonuclease G                              K08301     499     1055     0.434      415     
xac:XAC2770 ribonuclease G                              K08301     500     1054     0.434      415     
bps:BPSL2452 putative ribonuclease E                    K08300    1088     1053     0.304      772     
xfa:XF_1125 ribonuclease G                              K08301     497     1051     0.424      425     
bma:BMA0520 ribonuclease E                              K08300    1090     1049     0.303      772     
avn:Avin_12690 Ribonuclease E/G                         K08301     485     1042     0.440      400     
ngo:NGO_1785 ribonuclease E                             K08300     919     1042     0.287      799     
mlo:mll0212 ribonuclease E                              K08300     984     1038     0.302      925     
vch:VC_0419 cytoplasmic axial filament protein          K08301     489     1033     0.380      471     
pde:Pden_2965 RNAse E                                   K08300     869     1028     0.349      722     
vpa:VP2687 cytoplasmic axial filament protein           K08301     489     1024     0.404      403     
mca:MCA1481 ribonuclease E                              K08300     885     1022     0.294      790     
son:SO_4094 ribonuclease G Rng                          K08301     502     1020     0.407      400     
reh:H16_A2580 Ribonuclease G and E                      K08300    1024     1019     0.301      917     
vvu:VV1_1453 Cytoplasmic axial filament protein CafA an K08301     489     1018     0.402      403     
bxe:Bxe_A1062 RNAse E                                   K08300    1096     1016     0.285      790     
apl:APL_1436 ribonuclease E                             K08300     995     1015     0.304      744     
vfi:VF_0376 ribonuclease G                              K08301     489     1015     0.411      404     
nme:NMB0196 ribonuclease E                              K08300     919     1014     0.279      800     
bpe:BP2317 putative ribonuclease                        K08301     487     1011     0.409      401     
ddd:Dda3937_00666 Cytoplasmic axial filament protein Ca K08301     489     1007     0.386      412     
sfl:SF3285 ribonuclease G                               K08301     489     1007     0.386      412     
ecs:ECs_4119 ribonuclease G                             K08301     489     1007     0.386      412     
eco:b3247 RNase G                                       K08301     489     1007     0.386      412     
ecj:JW3216 ribonuclease G                               K08301     489     1007     0.386      412     
ece:Z4605 bundles of cytoplasmic filaments              K08301     495     1007     0.386      412     
hin:HI_1353 cytoplasmic axial filament protein (cafA)   K08301     491     1004     0.388      418     
smar:SM39_3863 ribonuclease G                           K08301     489     1000     0.388      412     
hdu:HD_0194 ribonuclease E                              K08300     980     1000     0.303      743     
rso:RSc2197 probable ribonuclease g (rnase g) (cytoplas K08301     489     1000     0.423      402     
seo:STM14_4064 ribonuclease G                           K08301     489      999     0.376      412     
cro:ROD_11461 ribonuclease E                            K08300    1076      999     0.296      815     
sty:STY3550 ribonuclease G                              K08301     489      999     0.376      412     
stm:STM3370 RNase G                                     K08301     489      999     0.376      412     
eam:EAMY_0287 ribonuclease G                            K08301     489      998     0.387      413     
kpn:KPN_03655 RNase G                                   K08301     489      994     0.379      412     
eca:ECA0271 ribonuclease G                              K08301     489      994     0.376      412     
aci:ACIAD0830 ribonuclease G, endoribonuclease G (cytop K08301     488      991     0.411      399     
yps:YPTB3561 ribonuclease G                             K08301     489      990     0.386      412     
ypk:y0196 cytoplasmic filament protein                  K08301     489      990     0.386      412     
ype:YPO3669 ribonuclease G                              K08301     489      990     0.386      412     
yen:YE3801 ribonuclease G                               K08301     489      987     0.386      412     
rpa:TX73_012670 Rne/Rng family ribonuclease             K08300    1051      985     0.298      1092    
acb:A1S_2777 ribonuclease G endoribonuclease G          K08301     469      983     0.417      398     
bmf:BAB1_0930 Ribonuclease E and G                      K08300     922      978     0.306      716     
pmu:PM0991 Rne                                          K08300    1004      976     0.310      756     
tel:tlr0597 ribonuclease E                              K08300     668      975     0.326      660     
bms:BR0912 ribonuclease, Rne/Rng domain protein         K08300     922      968     0.305      718     
enc:ECL_02552 ribonuclease E                            K08300    1034      955     0.314      622     
bme:BMEI1057 ribonuclease e / zinc metalloprotease      K08300     891      953     0.313      683     
cdf:CD630_11600 Ribonuclease G (RNase G) (Cytoplasmic a K08301     473      945     0.398      410     
gvi:glr1506 ORF_ID:glr1506                              K08300     662      943     0.333      669     
npu:Npun_R3890 RNA binding S1 domain protein            K08300     719      942     0.302      752     
bja:bll4305 ribonuclease E                              K08300    1032      942     0.271      1069    
sme:SMc01336 Probable ribonuclease E                    K08300     924      942     0.315      691     
syn:slr1129 ribonuclease E                              K08300     674      941     0.310      720     
ftu:FTT_1804c Ribonuclease G                            K08301     498      940     0.393      410     
atu:Atu1339 ribonuclease E                              K08300     977      932     0.318      741     
rru:Rru_A2149 RNAse E                                   K08300     889      930     0.297      879     
lpn:lpg2297 ribonuclease E                              K08300     667      921     0.378      418     
ret:RHE_CH01645 ribonuclease E protein                  K08300     961      915     0.318      717     
dvu:DVU_3055 ribonuclease, Rne/Rng family               K08300     489      908     0.383      407     
ana:alr4331 ribonuclease E                              K08300     687      901     0.305      750     
ccr:CC_1877 ribonuclease, Rne/Rng family protein        K08300     898      891     0.292      900     
bfr:BF1552 ribonuclease G                               K08301     524      883     0.353      431     
bth:BT_1500 Ribonuclease G                              K08301     524      881     0.350      431     
cte:CT2260 ribonuclease G                               K08301     560      880     0.323      473     
rle:RL1741 putative ribonuclease                        K08300     957      879     0.286      889     
buc:BU347 ribonuclease E                                K08300     902      870     0.356      421     
ctb:CTL0177 ribonuclease E                              K08301     512      866     0.360      411     
ctr:CT_808 ribonuclease E                               K08301     512      863     0.358      411     
cpn:CPn_0959 Axial Filament Protein                     K08301     515      853     0.350      414     
pma:Pro_1657 Ribonucleases G/E                          K08300     611      850     0.382      419     
cre:CHLRE_05g244050v5 uncharacterized protein                     3536      847     0.259      1499    
hth:HTH_1428 ribonuclease G and E                       K08301     466      832     0.357      409     
rpr:RP256 RIBONUCLEASE E (rne)                          K08300     683      816     0.393      331     
fps:FP1667 Ribonuclease G                               K08301     514      814     0.335      415     
tma:TM1606 cytoplasmic axial filament protein, putative K08301     454      804     0.372      400     
rco:RC0342 ribonuclease E                               K08300     690      803     0.395      329     
cit:102607608 ribonuclease E/G-like protein, chloroplas           1009      789     0.384      333     
cac:CA_C1256 Ribonucleases G/E family protein           K08301     481      773     0.340      406     
mdm:103421707 ribonuclease E/G-like protein, chloroplas           1049      770     0.340      432     
osa:4345271 ribonuclease E/G-like protein, chloroplasti           1085      766     0.316      468     
gmx:100809907 ribonuclease E/G-like protein, chloroplas            983      764     0.375      333     
sly:100136876 ribonuclease E                                       969      760     0.376      335     
btk:BT9727_4179 ribonuclease, Rne/Rng family            K08301     462      758     0.336      408     
ban:BA_4677 ribonuclease, Rne/Rng family                K08301     463      753     0.336      408     
mtr:11409378 ribonuclease E/G-like protein, chloroplast           1006      752     0.368      370     
zma:103643177 ribonuclease E/G-like protein, chloroplas           1059      751     0.370      335     
ath:AT2G04270 RNAse E/G-like protein                              1001      747     0.378      333     
bce:BC4439 Ribonuclease G                               K08301     462      743     0.328      408     
wol:WD_0929 ribonuclease, Rne/Rng family protein        K08300     587      742     0.325      462     
cbo:CBO2990 ribonuclease G                              K08301     479      741     0.312      410     
vvi:100256290 ribonuclease E/G-like protein, chloroplas           1026      739     0.369      339     
fnu:FN0154 Ribonuclease G                               K08301     458      739     0.336      422     
cpe:CPE2131 ribonuclease G                              K08301     480      732     0.333      429     
csv:101204095 ribonuclease E/G-like protein, chloroplas            992      724     0.357      333     
ani:ANIA_05649 hypothetical protein                               1720      714     0.268      1410    
afm:AFUA_2G17000 PT repeat family protein                         2170      693     0.334      697     
lma:LMJF_35_0290 hypothetical protein                             1514      667     0.373      509     
mgr:MGG_04093 hypothetical protein                                3163      649     0.227      1570    
aae:aq_1275 cytoplasmic axial filament protein          K08301     458      637     0.291      430     
xtr:108645832 skin secretory protein xP2                           682      634     0.345      618     
fgr:FGSG_13700 hypothetical protein                               3553      623     0.235      1534    
aga:4578181 uncharacterized protein LOC4578181                    7305      617     0.256      1535    
gga:100859371 proteoglycan 4                            K24286    1971      601     0.225      1510    
ame:726252 titin isoform X3                                       3341      562     0.225      1597    
cel:CELE_ZK84.1 Flocculation protein FLO11                         801      556     0.348      578     
vg:80532006 Cervid alphaherpesvirus 1; large tegument p K21075    3297      554     0.333      552     
tbr:Tb927.4.5120 hypothetical protein, conserved                  1378      554     0.285      769     
bta:528842 neurofilament heavy polypeptide              K04574    1081      548     0.262      633     
ssc:100156492 LOW QUALITY PROTEIN: neurofilament heavy  K04574    1074      536     0.246      646     
mmu:22138 titin                                         K12567   35463      528     0.223      1535    
ecb:100064328 neurofilament heavy polypeptide isoform X K04574    1075      523     0.245      666     
lin:lin1578 similar to ribonuclease G                   K08301     453      522     0.270      411     
rno:84015 titin isoform X1                              K12567   34993      517     0.220      1511    
cfa:442940 neurofilament heavy polypeptide              K04574    1135      513     0.241      701     
aor:AO090102000117 unnamed protein product; predicted p           1429      511     0.237      1440    
lmo:lmo1543 ribonuclease G                              K08301     453      507     0.258      403     
fca:101087272 neurofilament heavy polypeptide isoform X K04574    1098      493     0.231      683     
ola:101160764 hepatoma-derived growth factor-related pr           1270      488     0.246      700     
xla:100126001 proliferation marker protein Ki-67 isofor K17582    2153      483     0.207      1554    
dme:Dmel_CG32656 mucin 11A                                        1552      477     0.279      631     
mcc:701592 fibrous sheath CABYR-binding protein         K25630    1089      469     0.305      534     
dre:553343 uncharacterized protein si:ch211-266g18.10 i           2692      466     0.208      1346    
hsa:4744 neurofilament heavy chain                      K04574    1020      460     0.254      578     
tca:662729 titin                                                 11652      458     0.220      709     
ncr:NCU01283 hypothetical protein                                 1181      451     0.284      560     
ocu:100347000 proteoglycan 4 isoform X1                 K24286    1417      449     0.249      535     
ddi:DDB_G0295719 hypothetical protein                              616      427     0.248      577     
mdo:100024466 basic proline-rich protein-like                     1041      425     0.293      656     
aag:5570843 titin                                                 1504      416     0.247      691     
dra:DR_0458 hypothetical protein                                   839      414     0.258      628     
spn:SP_1772 cell wall surface anchor family protein               4776      406     0.178      1457    
tps:THAPSDRAFT_24018 predicted protein                            1529      386     0.194      1543    
bmor:101747164 uncharacterized protein LOC101747164 iso            573      383     0.304      368     
pai:PAE0850 paREP2b                                               2785      371     0.296      641     
cne:CNE03390 hypothetical protein                                  498      359     0.265      476     
sao:SAOUHSC_02404 hypothetical protein                  K12472    2478      358     0.193      1567    
spo:2542979 cofilin/tropomyosin family protein abp1     K20520     857      358     0.250      563     
cau:Caur_0201 autotransporter-associated beta strand re           1320      355     0.259      513     
sau:SA1964 FmtB protein                                 K12472    2481      349     0.195      1578    
kla:KLLA0_E01035g uncharacterized protein                         1878      334     0.202      672     
pti:PHATRDRAFT_50390 probable cell surface glycoprotein            623      333     0.280      432     
sce:YIR019C Flo11p                                      K19851    1367      326     0.225      493     
cal:CAALFM_C209530WA Eap1p                                         653      308     0.264      439     
ljo:LJ_1128 hypothetical protein                                  4734      303     0.212      1059    
pfa:PF3D7_1147800.1 membrane associated erythrocyte bin           2055      298     0.203      934     
hma:rrnAC1281 unknown                                              863      291     0.230      618     
tth:TT_C0323 hypothetical protein                                  414      274     0.307      407     
tpa:TP_0369 predicted coding region TP0369                         516      259     0.260      446     
mpn:MPN_447 cytadherence accessory protein HMW1                   1018      244     0.251      459     
lcb:LCABL_02770 Putative uncharacterized protein        K21471     494      239     0.277      292     
hvo:HVO_1134 uncharacterized protein                               757      238     0.267      390     
lpl:lp_3127 mucus-binding protein, LPXTG-motif cell wal           1189      235     0.237      397     
nmr:Nmar_0503 conserved hypothetical protein                       317      232     0.232      297     
spr:spr0581 Zinc metalloprotease                        K08643    1876      231     0.220      464     
hal:VNG_0514C conserved hypothetical protein            K03546     883      231     0.243      643     
spy:SPy_2009 hypothetical protein                                  379      230     0.242      322     
ag:CAA28538 IgA-specific serine endopeptidase (EC:3.4.2 K01347    1532      208     0.241      319     
tde:TDE_1185 lipoprotein, putative                                 458      206     0.286      217     
smu:SMU_610 cell surface antigen SpaP                             1562      205     0.248      484     
bsu:BSU28110 stage VI sporulation protein D             K06417     575      205     0.263      380     
mth:MTH_1901 unknown                                               465      203     0.289      232     
tko:TK0044 archaeal flagella-related protein D, interna K07327     474      199     0.338      225     
mba:Mbar_A0359 DNA repair protein                       K03547     776      182     0.214      336     
efa:EF1523 hypothetical protein                                    691      178     0.255      247     
llm:llmg_0072 pyruvate dehydrogenase complex E2 compone K00627     530      176     0.221      353     
ssa:SSA_1106 IgA-specific metalloendopeptidase          K01390    1874      168     0.250      332     
ser:SERP1316 cell wall surface anchor family protein              3692      168     0.165      1313    
lil:LB_268 conserved hypothetical protein                          289      164     0.377      106     
mge:MG_386 P200 protein                                           1616      161     0.208      682     
mmp:MMP0956 DNA topoisomerase I                         K03168     823      159     0.640      50      
hpj:jhp_1260 SIDEROPHORE-MEDIATED IRON TRANSPORT PROTEI K03832     280      149     0.233      163     
hpy:HP_0906 predicted coding region HP0906              K02414     527      148     0.195      395     
pfu:PF0022 putative RNase E                             K22469     469      138     0.233      301     
ape:APE_2185.1 hypothetical protein                                145      122     0.331      148     
bbu:BB_I16 virulent strain-associated repetitive antige            451      120     0.151      251     

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