SSDB Best Search Result

Entry:pmw:B2K_25620 (301 a.a.)
Name:DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 192 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
pjd:Pjdr2_4984 ATP dependent DNA ligase                 K01971     316      809     0.442      312     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      491     0.376      303     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      487     0.370      311     
ssy:SLG_04290 putative DNA ligase                       K01971     835      483     0.360      314     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      474     0.345      304     
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      469     0.352      310     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      463     0.337      309     
ase:ACPL_520 DNA ligase (ATP)                           K01971     304      460     0.364      294     
kfl:Kfla_4705 DNA polymerase LigD, ligase domain protei K01971     318      453     0.355      313     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      447     0.324      293     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      439     0.346      306     
amd:AMED_5204 ATP-dependent DNA ligase                             314      433     0.340      300     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      431     0.323      300     
sme:SM_b20912 putative ATP-dependent DNA ligase protein K01971     364      426     0.331      308     
scl:sce3523 unnamed protein product; High confidence in K01971     762      421     0.359      301     
atu:Atu6090 ATP-dependent DNA ligase                    K01971     353      417     0.311      302     
rha:RHA1_ro00237 possible DNA ligase (ATP), C-terminal  K01971     314      414     0.334      296     
dsy:DSY0616 hypothetical protein                        K01971     818      414     0.331      299     
sen:SACE_5682 DNA ligase, ATP-dependent                            333      413     0.326      301     
cpy:Cphy_1729 DNA ligase D                              K01971     813      409     0.303      297     
nca:Noca_1235 ATP dependent DNA ligase                  K01971     311      405     0.302      311     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      405     0.343      306     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      405     0.343      306     
swi:Swit_5282 DNA ligase D                              K01971     658      403     0.315      305     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      391     0.318      302     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      390     0.309      304     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      388     0.337      309     
nfa:NFA_29400 putative ATP-dependent DNA ligase         K01971     320      388     0.315      308     
sno:Snov_0819 DNA ligase D                              K01971     842      385     0.314      309     
mlo:mlr8042 similar to ATP-dependent DNA ligase                    293      385     0.303      294     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      384     0.298      309     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      384     0.305      308     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      383     0.326      304     
msm:MSMEG_6304 DNA ligase                                          354      380     0.380      234     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      379     0.323      316     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      377     0.305      305     
sgu:SGLAU_02470 ATP-dependent DNA ligase                K01971     326      376     0.331      311     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      376     0.323      300     
sco:SCO7345 probable ATP-dependent DNA ligase.          K01971     326      370     0.332      310     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      366     0.311      312     
xau:Xaut_4365 DNA ligase D                              K01971     886      364     0.307      309     
ppu:PP_3260 DNA ligase D                                K01971     833      363     0.305      308     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      363     0.306      235     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      355     0.324      309     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      352     0.337      276     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      350     0.308      308     
sma:SAVERM_1p90 putative ATP-dependent DNA ligase                  325      350     0.331      308     
sgr:SGR_1024 putative DNA ligase                                   353      349     0.315      279     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      349     0.267      300     
rle:pRL120229 putative DNA ligase family protein        K01971     881      348     0.295      302     
rpa:TX73_018915 DNA ligase D                            K01971     914      348     0.307      306     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      345     0.301      319     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      344     0.304      299     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      342     0.312      308     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      338     0.305      308     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      337     0.299      311     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      332     0.346      254     
phe:Phep_1702 DNA ligase D                              K01971     877      327     0.260      315     
oih:OB3034 hypothetical conserved protein               K01971     595      327     0.278      299     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      324     0.257      296     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      324     0.298      312     
afu:AF_1725 DNA ligase, putative                        K01971     313      324     0.298      305     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      318     0.315      251     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      317     0.289      304     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      300     0.325      209     
sro:Sros_7176 ATP-dependent DNA ligase                             508      294     0.327      257     
xom:XOO1771 DNA ligase                                             534      285     0.292      243     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      282     0.297      296     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      279     0.271      292     
ton:TON_1515 thermostable DNA ligase                    K10747     562      265     0.282      234     
aae:aq_1394 DNA ligase (ATP dependent)                             585      264     0.276      319     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      263     0.302      252     
pde:Pden_0412 ATP dependent DNA ligase                             514      263     0.282      280     
pfu:PF1635 DNA ligase (lig)                             K10747     561      260     0.250      320     
hth:HTH_1466 DNA ligase                                            572      252     0.274      234     
hal:VNG_0881G DNA ligase                                K10747     561      249     0.285      312     
mac:MA_2571 DNA ligase (ATP)                            K10747     568      246     0.264      284     
zga:ZOBELLIA_2113 DNA ligase                                       554      245     0.266      214     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      245     0.338      228     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      240     0.256      234     
tac:Ta1148 DNA ligase related protein                   K10747     588      240     0.283      237     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      240     0.261      284     
pab:PAB2002 lig DNA ligase                              K10747     559      239     0.243      325     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      233     0.311      190     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      232     0.262      275     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      231     0.254      256     
tre:TRIREDRAFT_60873 hypothetical protein                          881      230     0.307      202     
ath:AT1G66730 DNA LIGASE 6                                        1396      229     0.271      325     
afm:AFUA_3G11140 DNA ligase I                                      833      228     0.359      145     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      228     0.284      261     
fvr:FVEG_04990 DNA ligase 1                                        879      227     0.302      202     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      227     0.276      261     
fgr:FGSG_06316 hypothetical protein                                833      222     0.331      145     
mgr:MGG_03854 DNA ligase 1                                         859      222     0.345      145     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      221     0.247      243     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      218     0.273      260     
maj:MAA_04574 hypothetical protein                                 871      218     0.338      145     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      218     0.284      275     
aor:AO090003000668 unnamed protein product; ATP-depende            827      218     0.304      191     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      216     0.309      204     
pai:PAE0833 DNA ligase                                  K10747     584      216     0.262      321     
gmx:100807673 DNA ligase 6 isoform X1                             1402      211     0.272      228     
sto:STK_02230 DNA ligase                                K10747     600      211     0.265      275     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      210     0.271      240     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      209     0.228      324     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      208     0.232      233     
hma:rrnAC0463 DNA ligase                                K10747     554      206     0.300      213     
ani:ANIA_04883 hypothetical protein                                816      205     0.294      204     
smo:SELMODRAFT_96808 hypothetical protein                          610      204     0.235      328     
mtr:11442607 DNA ligase 6 isoform X1                              1409      203     0.276      228     
ncr:NCU09706 DNA ligase I                                          917      202     0.292      202     
sot:102603887 DNA ligase 1                                        1441      201     0.238      344     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      201     0.281      288     
cit:102618631 DNA ligase 6 isoform X1                             1402      199     0.297      158     
sly:101249429 DNA ligase 6 isoform X1                             1441      199     0.238      344     
vvi:100266816 DNA ligase 6 isoform X1                             1449      198     0.323      155     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      196     0.273      275     
nta:107805422 DNA ligase 6 isoform X1                             1426      189     0.246      252     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      189     0.307      189     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      188     0.278      241     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      188     0.255      341     
mth:MTH_1580 DNA ligase                                 K10747     561      188     0.278      241     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      186     0.217      322     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      186     0.272      239     
amj:102566879 DNA ligase 1                              K10747     954      185     0.290      221     
osa:4324149 DNA ligase 6 isoform X1                               1404      183     0.234      342     
cne:CNI04170 DNA ligase, putative                       K10747     803      183     0.275      211     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      181     0.292      240     
pto:PTO0672 DNA ligase                                  K10747     590      181     0.278      194     
yli:2908208 DNA ligase 1                                K10747     711      178     0.266      207     
rcu:8265013 DNA ligase 6 isoform X1                               1394      177     0.230      344     
dne:112995498 DNA ligase 1                              K10747     868      176     0.275      218     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      176     0.282      209     
dme:Dmel_CG12176 DNA ligase 4                           K10777     918      175     0.226      274     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      175     0.251      219     
mdm:103426184 DNA ligase 6                                        1407      174     0.277      155     
xtr:100271763 DNA ligase 1                              K10747    1040      174     0.257      245     
tva:5466150 DNA ligase 1/3 family member family                    679      173     0.271      210     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      172     0.282      220     
pmur:107285325 DNA ligase 1                             K10747     944      172     0.283      219     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      172     0.309      191     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      171     0.259      251     
cpoc:100734013 DNA ligase 1                             K10747     919      169     0.252      294     
csv:101213447 DNA ligase 1                              K10747     801      168     0.317      199     
zma:103651343 DNA ligase 6                                        1397      168     0.241      344     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      168     0.312      189     
mdo:100616962 DNA ligase 1-like                                    632      167     0.233      322     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      166     0.253      304     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      166     0.279      247     
bta:100124507 DNA ligase 1                              K10747     916      166     0.236      309     
rno:81513 DNA ligase 1                                  K10747     913      166     0.256      277     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      165     0.279      247     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      165     0.257      296     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      165     0.258      190     
cin:100181519 DNA ligase 1-like                         K10747    1060      164     0.292      192     
nve:5510104 DNA ligase 1                                K10747     959      164     0.263      205     
ssc:100520434 DNA ligase 1                              K10747     923      164     0.275      247     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      163     0.236      309     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      163     0.264      239     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      162     0.268      250     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      162     0.297      185     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      162     0.253      269     
mmu:16881 DNA ligase 1                                  K10747     916      161     0.243      304     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      160     0.275      247     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      159     0.259      294     
tcr:506835.120 DNA ligase I                             K10747     701      159     0.235      238     
tca:657210 DNA ligase 4                                 K10777     847      158     0.256      270     
xla:397978 DNA ligase 1                                 K10747    1070      158     0.253      245     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      157     0.248      307     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      157     0.248      307     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      156     0.248      307     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      156     0.279      136     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      155     0.296      247     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      153     0.260      208     
ola:101167483 DNA ligase 1                              K10747     993      148     0.255      212     
ehi:EHI_111060 DNA ligase                               K10747     685      146     0.245      204     
tps:THAPSDRAFT_268404 ligase                            K10747     633      145     0.248      226     
pif:PITG_04709 DNA ligase, putative                               3896      144     0.262      145     
dre:556995 DNA ligase 1                                 K10747    1058      142     0.247      215     
gla:GL50803_007649 DNA ligase (ATP)                                810      141     0.241      220     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      141     0.263      236     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      139     0.279      265     
pti:PHATR_51005 hypothetical protein                    K10747     651      139     0.258      291     
tru:101071353 DNA ligase 4                              K10777     908      137     0.246      281     
ppp:112290811 DNA ligase 1                              K10747     776      137     0.302      199     
clv:102083602 DNA ligase 3                              K10776     994      126     0.266      222     
tgu:100225693 DNA ligase 4                              K10777     911      125     0.238      252     
vfi:VF_1450 DNA ligase                                  K26441     285      121     0.238      277     
vch:VC_1542 DNA ligase                                  K26441     282      119     0.243      263     
avn:Avin_07760 HAD-superfamily hydrolase, subfamily IA,            198      112     0.262      206     
smm:Smp_192230 hypothetical protein                                 73       89     0.309      55      
tde:TDE_1676 ribosomal protein S18                      K02963      89       89     0.350      60      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]