Entry
Name
Endocytosis - Mastomys coucha (southern multimammate mouse)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Mastomys coucha (southern multimammate mouse) [GN:
mcoc ]
Gene
116068360 Vps29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
116068413 Vps37b; vacuolar protein sorting-associated protein 37B isoform X1 [KO:K12185 ]
116068527 Vps37d; vacuolar protein sorting-associated protein 37D isoform X1 [KO:K12185 ]
116069002 Vps36; vacuolar protein-sorting-associated protein 36 isoform X1 [KO:K12190 ]
116069092 Rab11fip1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
116069184 Vps37a; vacuolar protein sorting-associated protein 37A [KO:K12185 ]
116069402 Psd3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
116069548 Eps15l1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
116069760 Vps35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
116070066 Pard6a; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
116070112 Vps4a; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
116070990 Arap2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
116071955 Pdcd6ip; programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
116073464 Vps26b; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
116074353 Vps26a; vacuolar protein sorting-associated protein 26A isoform X1 [KO:K18466 ]
116074810 Vps28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
116075478 Rufy2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
116075683 Agap2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
116076834 Igf2r; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
116076865 Arfgap3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
116077070 Rab11fip4; rab11 family-interacting protein 4 isoform X1 [KO:K12485 ]
116077131 Hgs; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
116077273 Rufy1; RUN and FYVE domain-containing protein 1 isoform X1 [KO:K12482 ]
116077870 Acap1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
116078135 Rabep1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
116078371 Vps25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
116079020 Rab11fip3; rab11 family-interacting protein 3 isoform X1 [KO:K12485 ]
116080552 Asap2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
116082364 Asap1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
116082367 Il2ra; interleukin-2 receptor subunit alpha isoform X1 [KO:K05068 ]
116083935 Zfyve16; zinc finger FYVE domain-containing protein 16 isoform X1 [KO:K04679 ]
116085795 Acap2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12489 ]
116086951 Bin1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
116087072 Arap3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
116087170 Il2rg; cytokine receptor common subunit gamma isoform X1 [KO:K05070 ]
116087365 Smad2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
116088159 Arfgef1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
116088246 Smap1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
116088745 Agap1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
116090164 Sh3kbp1; LOW QUALITY PROTEIN: SH3 domain-containing kinase-binding protein 1 [KO:K12470 ]
116090467 Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
116091408 Arfgef2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
116091546 Arfgap1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
116091625 Arpc5l; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
116093439 Vps45; vacuolar protein sorting-associated protein 45 [KO:K12479 ]
116096300 Dnajc6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
116096378 Zfyve9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
116096394 Eps15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
116096819 Ldlrap1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
116096860 Asap3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12488 ]
116096877 Cdc42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
116096920 Capzb; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
116097158 Acap3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12489 ]
116097347 Vps4b; vacuolar protein sorting-associated protein 4B [KO:K12196 ]
116097552 Agap3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
116097788 Vta1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
116098639 Wasl; neural Wiskott-Aldrich syndrome protein isoform X1 [KO:K23612 ]
116099160 Rab11fip5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
116099532 Iqsec3; IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
116102254 Tsg101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
116102667 Arap1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
116103294 Hspa6; LOW QUALITY PROTEIN: heat shock 70 kDa protein 6 [KO:K03283 ]
116103562 Vps37c; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
116103938 Gbf1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
116104061 Rab11fip2; rab11 family-interacting protein 2 isoform X1 [KO:K12484 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
mcoc04060 Cytokine-cytokine receptor interaction
mcoc04070 Phosphatidylinositol signaling system
mcoc04130 SNARE interactions in vesicular transport
KO pathway