KEGG   PATHWAY: mlf04622
Entry
mlf04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Myotis lucifugus (little brown bat)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
mlf04622  RIG-I-like receptor signaling pathway
mlf04622

Organism
Myotis lucifugus (little brown bat) [GN:mlf]
Gene
102417209  IFNB1; interferon beta [KO:K05415]
102417312  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X4 [KO:K07209] [EC:2.7.11.10]
102418059  NFKBIB; NF-kappa-B inhibitor beta [KO:K02581]
102418507  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
102419483  NLRX1; NLR family member X1 isoform X1 [KO:K12653]
102419919  [KO:K05440]
102420724  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
102422347  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
102422611  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
102422872  IRF3; interferon regulatory factor 3 isoform X2 [KO:K05411]
102423165  AZI2; 5-azacytidine-induced protein 2 isoform X2 [KO:K12651]
102424113  TBK1; serine/threonine-protein kinase TBK1 isoform X1 [KO:K05410] [EC:2.7.11.10]
102424236  RELA; transcription factor p65 [KO:K04735]
102424242  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
102425030  [KO:K05440]
102425101  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
102425420  MAP3K1; mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
102425603  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
102426758  TANK; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650]
102427389  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
102427440  DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 [KO:K11594] [EC:5.6.2.7]
102427649  SIKE1; suppressor of IKBKE 1 isoform X1 [KO:K12656]
102427744  [KO:K05440]
102428378  [KO:K05440]
102428495  CXCL8; interleukin-8 [KO:K10030]
102428799  DHX58; probable ATP-dependent RNA helicase DHX58 [KO:K12649] [EC:5.6.2.6]
102428926  ATG5; autophagy protein 5 [KO:K08339]
102429407  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
102429931  OTUD5; OTU domain-containing protein 5 isoform X2 [KO:K12655] [EC:3.4.19.12]
102430582  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
102430624  ISG15; LOW QUALITY PROTEIN: ubiquitin-like protein ISG15 [KO:K12159]
102430669  IFNK; interferon kappa [KO:K05441]
102431058  IL12A; interleukin-12 subunit alpha [KO:K05406]
102432246  ATG12; ubiquitin-like protein ATG12 isoform X1 [KO:K08336]
102432614  TKFC; LOW QUALITY PROTEIN: triokinase/FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
102433169  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
102433190  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171]
102434278  [KO:K04400] [EC:3.4.22.63]
102434401  RNF125; E3 ubiquitin-protein ligase RNF125 isoform X1 [KO:K12170] [EC:2.3.2.27]
102434781  TMEM173; stimulator of interferon genes protein [KO:K12654]
102435627  IL12B; interleukin-12 subunit beta [KO:K05425]
102435748  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
102436137  IKBKG; NF-kappa-B essential modulator isoform X3 [KO:K07210]
102436804  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
102437455  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
102437558  TNF; tumor necrosis factor isoform X1 [KO:K03156]
102437934  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
102438079  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X3 [KO:K08601] [EC:3.4.19.12]
102438439  [KO:K05440]
102438914  [KO:K04441] [EC:2.7.11.24]
102439039  DDX58; probable ATP-dependent RNA helicase DDX58 isoform X1 [KO:K12646] [EC:5.6.2.6]
102439064  CASP10; caspase-10 [KO:K04400] [EC:3.4.22.63]
102439259  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 [KO:K10652] [EC:2.3.2.27]
102439349  [KO:K05440]
102439369  CASP8; LOW QUALITY PROTEIN: caspase-8 [KO:K04398] [EC:3.4.22.61]
102440034  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
102440312  [KO:K05440]
102440412  MAVS; mitochondrial antiviral-signaling protein [KO:K12648]
102440626  [KO:K05440]
102440930  [KO:K05440]
102441235  [KO:K05440]
102441543  [KO:K05440]
102441851  IKBKE; LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
102441859  IFNE; interferon epsilon [KO:K05442]
102442281  TBKBP1; TANK-binding kinase 1-binding protein 1 [KO:K12652]
111824600  FADD; FAS-associated death domain protein [KO:K02373]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
mlf04010  MAPK signaling pathway
mlf04120  Ubiquitin mediated proteolysis
mlf04210  Apoptosis
mlf04630  JAK-STAT signaling pathway
KO pathway
ko04622   

DBGET integrated database retrieval system