KEGG   PATHWAY: osa03022
Entry
osa03022                    Pathway                                
Name
Basal transcription factors - Oryza sativa japonica (Japanese rice)
Class
Genetic Information Processing; Transcription
Pathway map
osa03022  Basal transcription factors
osa03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
4338303  uncharacterized protein isoform X1 [KO:K03122]
4337575  TFIIAy; transcription initiation factor IIA subunit 2 [KO:K03123]
4323838  transcription initiation factor IIA subunit 2 [KO:K03123]
4347689  P0569E11.1; transcription initiation factor IIB [KO:K03124]
4331943  plant-specific TFIIB-related protein 1 [KO:K03124]
4339510  transcription initiation factor IIB-like [KO:K03124]
107276500  transcription initiation factor IIB [KO:K03124]
107277507  transcription initiation factor IIB-like [KO:K03124]
4333619  TBP-2; tATA-binding protein 2 [KO:K03120]
4348699  TATA-binding protein 2-like [KO:K03120]
4352633  TATA-binding protein 2-like [KO:K03120]
9266475  transcription initiation factor TFIID subunit 1 isoform X2 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
4347029  transcription initiation factor TFIID subunit 2 [KO:K03128]
4338489  transcription initiation factor TFIID subunit 7 [KO:K03132]
4333405  transcription initiation factor TFIID subunit 8 [KO:K14649]
9270043  transcription initiation factor TFIID subunit 8 [KO:K14649]
4347127  transcription initiation factor TFIID subunit 10 [KO:K03134]
4341679  transcription initiation factor TFIID subunit 5 [KO:K03130]
4342682  transcription initiation factor TFIID subunit 5 isoform X2 [KO:K03130]
4333214  transcription initiation factor TFIID subunit 4b isoform X1 [KO:K03129]
4330186  transcription initiation factor TFIID subunit 4b isoform X1 [KO:K03129]
4325055  transcription initiation factor TFIID subunit 12 isoform X1 [KO:K03126]
4327470  transcription initiation factor TFIID subunit 12b isoform X1 [KO:K03126]
4324027  transcription initiation factor TFIID subunit 6 [KO:K03131]
4333084  transcription initiation factor TFIID subunit 9 [KO:K03133]
4325286  transcription initiation factor TFIID subunit 11 [KO:K03135]
9268703  transcription initiation factor TFIID subunit 13 [KO:K03127]
4345330  uncharacterized protein [KO:K03136]
107278090  uncharacterized protein [KO:K03136]
107277854  uncharacterized protein isoform X1 [KO:K03136]
4348554  uncharacterized protein [KO:K03137]
4331801  uncharacterized protein [KO:K03137]
4348225  transcription initiation factor IIF subunit alpha isoform X1 [KO:K03138]
4339276  uncharacterized protein [KO:K03139] [EC:5.6.2.-]
9270266  transcription initiation factor IIF subunit beta isoform X1 [KO:K03139] [EC:5.6.2.-]
4345313  general transcription and DNA repair factor IIH subunit TFB1-1 [KO:K03141]
4336358  general transcription factor IIH subunit 2 [KO:K03142]
4328152  general transcription and DNA repair factor IIH subunit TFB4 [KO:K03143]
4337426  general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [KO:K03144]
4325640  general transcription and DNA repair factor IIH helicase/translocase subunit XPB1 [KO:K10843] [EC:5.6.2.4]
4337788  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
4343686  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
4338052  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
4338689  CAK-R2; cyclin-dependent kinase D-1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
4340268  uncharacterized LOC4340268 [KO:K10842]
4350497  uncharacterized protein [KO:K10842]
4334040  CYCH-1; cyclin-H1-1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
osa03020  RNA polymerase
osa03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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