KEGG   PATHWAY: tmu04610
Entry
tmu04610                    Pathway                                
Name
Complement and coagulation cascades - Trichechus manatus latirostris (Florida manatee)
Description
The complement system is a proteolytic cascade in blood plasma and a mediator of innate immunity, a nonspecific defense mechanism against pathogens. There are three pathways of complement activation: the classical pathway, the lectin pathway, and the alternative pathway. All of these pathways generate a crucial enzymatic activity that, in turn, generates the effector molecules of complement. The main consequences of complement activation are the opsonization of pathogens, the recruitment of inflammatory and immunocompetent cells, and the direct killing of pathogens. Blood coagulation is another series of proenzyme-to-serine protease conversions, culminating the formation of thrombin, the enzyme responsible for the conversion of soluble fibrinogen to the insoluble fibrin clot. Protease-activated receptors, such as those activated by thrombin, are members of G protein-coupled receptors and function as a mediator of innate immunity. The kallikrein-kinin system is an endogenous metabolic cascade, triggering of which results in the release of vasoactive kinins (bradykinin-related peptides). Kinin peptides are implicated in many physiological and pathological processes including the regulation of blood pressure and sodium homeostasis, inflammatory processes, and the cardioprotective effects of preconditioning.
Class
Organismal Systems; Immune system
Pathway map
tmu04610  Complement and coagulation cascades
tmu04610

Organism
Trichechus manatus latirostris (Florida manatee) [GN:tmu]
Gene
101347612  coagulation factor VII [KO:K01320] [EC:3.4.21.21]
101358760  tissue factor [KO:K03901]
101342146  coagulation factor XII [KO:K01328] [EC:3.4.21.38]
101352726  coagulation factor IX isoform X1 [KO:K01321] [EC:3.4.21.22]
101349323  von Willebrand factor [KO:K03900]
101340357  coagulation factor VIII [KO:K03899]
101347861  LOW QUALITY PROTEIN: coagulation factor X [KO:K01314] [EC:3.4.21.6]
101347027  coagulation factor V [KO:K03902]
101347713  prothrombin [KO:K01313] [EC:3.4.21.5]
101355966  fibrinogen alpha chain [KO:K03903]
101342093  fibrinogen beta chain isoform X1 [KO:K03904]
101341660  fibrinogen gamma chain isoform X1 [KO:K03905]
101341950  coagulation factor XIII A chain [KO:K03917] [EC:2.3.2.13]
101351930  coagulation factor XIII B chain [KO:K03906]
101358047  proteinase-activated receptor 1 [KO:K03914]
101358572  proteinase-activated receptor 3 [KO:K04235]
101354608  proteinase-activated receptor 4 [KO:K04236]
101350804  carboxypeptidase B2-like [KO:K01300] [EC:3.4.17.20]
101351060  carboxypeptidase B2 [KO:K01300] [EC:3.4.17.20]
101353397  thrombomodulin [KO:K03907]
101352948  endothelial protein C receptor [KO:K06557]
101349839  vitamin K-dependent protein C [KO:K01344] [EC:3.4.21.69]
101350529  vitamin K-dependent protein S [KO:K03908]
101348466  plasminogen activator inhibitor 1 [KO:K03982]
101349126  plasminogen activator inhibitor 2 [KO:K19821]
105756295  plasma serine protease inhibitor [KO:K03913]
101358666  glia-derived nexin isoform X2 [KO:K16643]
101350991  tissue-type plasminogen activator [KO:K01343] [EC:3.4.21.68]
101350586  urokinase-type plasminogen activator [KO:K01348] [EC:3.4.21.73]
101351191  urokinase plasminogen activator surface receptor isoform X1 [KO:K03985]
101342891  plasminogen isoform X2 [KO:K01315] [EC:3.4.21.7]
101358166  plasma kallikrein [KO:K01324] [EC:3.4.21.34]
101352995  kininogen-1 isoform X1 [KO:K03898]
101346224  B1 bradykinin receptor [KO:K03915]
101347252  B2 bradykinin receptor [KO:K03916]
101359751  tissue factor pathway inhibitor isoform X1 [KO:K03909]
101344953  alpha-1-antitrypsin [KO:K03984]
101343760  antithrombin-III isoform X1 [KO:K03911]
101356752  heparin cofactor 2 [KO:K03912]
101359418  plasma protease C1 inhibitor [KO:K04001]
101340451  alpha-2-antiplasmin [KO:K03983]
101349238  alpha-2-macroglobulin [KO:K03910]
101349199  complement C1q subcomponent subunit A isoform X2 [KO:K03986]
101348685  complement C1q subcomponent subunit B [KO:K03987]
101348943  complement C1q subcomponent subunit C [KO:K03988]
101359146  complement C1r subcomponent [KO:K01330] [EC:3.4.21.41]
101344169  complement C1s subcomponent [KO:K01331] [EC:3.4.21.42]
101351551  mannose-binding protein C [KO:K03991]
101354394  mannose-binding protein A-like [KO:K03991]
101351430  mannan-binding lectin serine protease 1 isoform X1 [KO:K03992] [EC:3.4.21.-]
101342871  mannan-binding lectin serine protease 2 [KO:K03993] [EC:3.4.21.104]
101351736  complement C4-A isoform X1 [KO:K03989]
101350027  complement C2 [KO:K01332] [EC:3.4.21.43]
101350977  complement C3 [KO:K03990]
101350698  complement factor B [KO:K01335] [EC:3.4.21.47]
101356637  complement factor D [KO:K01334] [EC:3.4.21.46]
101350370  complement C5 isoform X1 [KO:K03994]
101352489  complement component C6 [KO:K03995]
101356842  LOW QUALITY PROTEIN: complement component C7 [KO:K03996]
101349415  complement component C8 alpha chain [KO:K03997]
101360625  complement component C8 beta chain [KO:K03998]
101356950  complement component C8 gamma chain [KO:K03999]
101348555  LOW QUALITY PROTEIN: complement component C9 [KO:K04000]
101346693  C3a anaphylatoxin chemotactic receptor [KO:K04009]
101359119  V-set and immunoglobulin domain-containing protein 4 [KO:K19822]
101358574  complement receptor type 2 [KO:K04011]
101357920  integrin alpha-M isoform X2 [KO:K06461]
101349050  integrin beta-2 [KO:K06464]
101348527  C5a anaphylatoxin chemotactic receptor 1 [KO:K04010]
101359097  C4b-binding protein alpha chain [KO:K04002]
101359360  C4b-binding protein beta chain [KO:K04003]
101355196  complement factor I [KO:K01333] [EC:3.4.21.45]
101344709  LOW QUALITY PROTEIN: complement factor H-like [KO:K04004]
101358307  membrane cofactor protein isoform X1 [KO:K04007]
101358829  complement decay-accelerating factor isoform X1 [KO:K04006]
101344947  LOW QUALITY PROTEIN: complement factor H-related protein 2 [KO:K23815]
101355369  clusterin [KO:K17252]
101356068  vitronectin [KO:K06251]
Compound
C00290  Fibrin
C00306  Bradykinin
C00471  Plasmin
C00752  Thrombin
C01065  Coagulation factor Xa
C01715  Plasma kallikrein
C02002  C3a anaphylatoxin
C03259  Coagulation factor IXa
C03262  Coagulation factor XIa
C03378  Coagulation factor VIIa
C03379  Coagulation factor XIIa
C03780  Coagulation factor Va
C04001  Coagulation factor VIIIa
C16510  C5a anaphylatoxin
C22531  Complement component 2a
C22532  Complement component 2b
C22533  Complement component 3b
C22534  Complement component 3f
C22535  Complement iC3b
C22536  Complement component 3dg
C22537  Complement component 3c
C22538  Complement component 3d
C22539  Complement C3(H2O)
C22540  Complement factor Bb
C22541  Complement component 4a
C22542  Complement component 4b
C22543  Complement component 4c
C22544  Complement component 4d
C22545  Complement component 5b
C22546  Coagulation factor XIIIa
C22547  APC
Reference
  Authors
Bajic G, Degn SE, Thiel S, Andersen GR
  Title
Complement activation, regulation, and molecular basis for complement-related diseases.
  Journal
EMBO J 34:2735-57 (2015)
DOI:10.15252/embj.201591881
Reference
  Authors
Mathern DR, Heeger PS
  Title
Molecules Great and Small: The Complement System.
  Journal
Clin J Am Soc Nephrol 10:1636-50 (2015)
DOI:10.2215/CJN.06230614
Reference
  Authors
Merle NS, Church SE, Fremeaux-Bacchi V, Roumenina LT
  Title
Complement System Part I - Molecular Mechanisms of Activation and Regulation.
  Journal
Front Immunol 6:262 (2015)
DOI:10.3389/fimmu.2015.00262
Reference
  Authors
Oikonomopoulou K, Ricklin D, Ward PA, Lambris JD
  Title
Interactions between coagulation and complement--their role in inflammation.
  Journal
Semin Immunopathol 34:151-65 (2012)
DOI:10.1007/s00281-011-0280-x
Reference
  Authors
Kurosawa S, Stearns-Kurosawa DJ
  Title
Complement, thrombotic microangiopathy and disseminated intravascular coagulation.
  Journal
J Intensive Care 2:65 (2014)
DOI:10.1186/s40560-014-0061-4
Reference
  Authors
Hillmeister P, Persson PB
  Title
The Kallikrein-Kinin system.
  Journal
Acta Physiol (Oxf) 206:215-9 (2012)
DOI:10.1111/apha.12007
Reference
  Authors
Rau JC, Beaulieu LM, Huntington JA, Church FC
  Title
Serpins in thrombosis, hemostasis and fibrinolysis.
  Journal
J Thromb Haemost 5 Suppl 1:102-15 (2007)
DOI:10.1111/j.1538-7836.2007.02516.x
Reference
  Authors
Crooks MG, Hart SP
  Title
Coagulation and anticoagulation in idiopathic pulmonary fibrosis.
  Journal
Eur Respir Rev 24:392-9 (2015)
DOI:10.1183/16000617.00008414
Reference
  Authors
Christiaans SC, Wagener BM, Esmon CT, Pittet JF
  Title
Protein C and acute inflammation: a clinical and biological perspective.
  Journal
Am J Physiol Lung Cell Mol Physiol 305:L455-66 (2013)
DOI:10.1152/ajplung.00093.2013
Reference
  Authors
Alberelli MA, De Candia E
  Title
Functional role of protease activated receptors in vascular biology.
  Journal
Vascul Pharmacol 62:72-81 (2014)
DOI:10.1016/j.vph.2014.06.001
Reference
  Authors
Smith HW, Marshall CJ
  Title
Regulation of cell signalling by uPAR.
  Journal
Nat Rev Mol Cell Biol 11:23-36 (2010)
DOI:10.1038/nrm2821
Reference
  Authors
Ricklin D, Lambris JD
  Title
Complement in immune and inflammatory disorders: pathophysiological mechanisms.
  Journal
J Immunol 190:3831-8 (2013)
DOI:10.4049/jimmunol.1203487
Reference
  Authors
Ricklin D, Lambris JD
  Title
Complement in immune and inflammatory disorders: therapeutic interventions.
  Journal
J Immunol 190:3839-47 (2013)
DOI:10.4049/jimmunol.1203200
Reference
  Authors
Loof TG, Deicke C, Medina E
  Title
The role of coagulation/fibrinolysis during Streptococcus pyogenes infection.
  Journal
Front Cell Infect Microbiol 4:128 (2014)
DOI:10.3389/fcimb.2014.00128
Reference
  Authors
Jozsi M, Tortajada A, Uzonyi B, Goicoechea de Jorge E, Rodriguez de Cordoba S
  Title
Factor H-related proteins determine complement-activating surfaces.
  Journal
Trends Immunol 36:374-84 (2015)
DOI:10.1016/j.it.2015.04.008
Related
pathway
tmu04611  Platelet activation
tmu04662  B cell receptor signaling pathway
tmu04750  Inflammatory mediator regulation of TRP channels
KO pathway
ko04610   
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