GFIT result for
rpi
|
GFIT result for
rpi
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rpi:Rpic_0501 (863 a.a.) |
-- |
K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rpf:Rpic12D_0488(867) | 867 | 95.6 | 5620 | 0 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rwe:KOL96_10585(867) | 868 | 94.2 | 5551 | 2 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rmn:TK49_07020(873) | 871 | 86.5 | 5085 | 1 | <> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsl:RPSI07_2772(872) | 870 | 76.6 | 4552 | 5 | <> | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsg:JK151_05510(869) | 870 | 76.7 | 4546 | 6 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsc:RCFBP_20893(870) | 869 | 75.1 | 4432 | 15 | <> | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pvd:CFBP1590__3348(866) | 875 | 57.8 | 3336 | 1 | -> | K01971 | ligD | ligD; Multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptw:TUM18999_27200(853) | 865 | 59.2 | 3328 | 7 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pamg:BKM19_019020(866) | 874 | 57.6 | 3326 | 3 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psb:Psyr_3245(866) | 873 | 57.2 | 3324 | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psoa:PSm6_48470(?) | 864 | 58.9 | 3324 | 0 | -- | - | |||
| > psyr:N018_16280(863) | 873 | 57.3 | 3323 | 4 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pavl:BKM03_11910(851) | 862 | 57.9 | 3322 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plul:FOB45_16520(855) | 870 | 57.4 | 3321 | 2 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psku:KUIN1_32010(?) | 875 | 57.0 | 3320 | 0 | -- | - | |||
| > pst:PSPTO_3464(851) | 862 | 57.9 | 3320 | 3 | -> | K01971 | ligD | DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfk:PFAS1_00235(863) | 874 | 57.8 | 3318 | 2 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmk:MDS_2413(842) | 863 | 58.7 | 3313 | 2 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psav:PSA3335_13010(866) | 874 | 57.3 | 3312 | 2 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psp:PSPPH_3165(866) | 874 | 57.4 | 3311 | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psyi:MME58_16635(878) | 886 | 56.9 | 3308 | 2 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptre:I9H09_10485(855) | 866 | 57.3 | 3299 | 0 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcab:JGS08_10675(875) | 884 | 56.4 | 3296 | 2 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppz:H045_08195(1124) | 867 | 57.1 | 3295 | 3 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfx:A7318_14040(829) | 861 | 58.0 | 3292 | 4 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pch:EY04_14070(844) | 862 | 57.4 | 3284 | 1 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pnb:NK667_11890(839) | 861 | 57.3 | 3282 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptv:AA957_01010(825) | 860 | 58.5 | 3282 | 2 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psam:HU731_001245(836) | 862 | 57.8 | 3280 | 5 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pchp:C4K32_3016(841) | 862 | 57.3 | 3278 | 2 | -> | K01971 | ligD | ATP-dependent DNA ligase, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppeg:KUA23_13605(828) | 862 | 58.0 | 3276 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pym:AK972_2705(832) | 862 | 58.5 | 3275 | 2 | -> | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pall:UYA_12525(843) | 860 | 58.5 | 3274 | 0 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcof:POR16_14780(859) | 870 | 57.0 | 3274 | 0 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcp:JM49_15955(841) | 863 | 57.1 | 3273 | 1 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psed:DM292_08665(855) | 873 | 56.4 | 3273 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfc:PflA506_2574(837) | 861 | 58.3 | 3271 | 4 | -> | K01971 | ligD | ligD_1; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptz:HU718_011965(863) | 873 | 56.9 | 3270 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > past:N015_10840(865) | 873 | 56.7 | 3269 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmy:Pmen_3217(837) | 862 | 58.7 | 3268 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psem:TO66_14815(865) | 877 | 57.5 | 3266 | 2 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmoe:HV782_011800(883) | 893 | 56.7 | 3265 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pza:HU749_015185(860) | 872 | 57.5 | 3264 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phf:NLY38_18845(837) | 862 | 58.7 | 3263 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psa:PST_2130(851) | 872 | 57.1 | 3262 | 4 | -- | K01971 | ligD | DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phom:KJF94_08090(?) | 873 | 57.2 | 3261 | 0 | -- | - | |||
| > psz:PSTAB_2018(851) | 873 | 56.4 | 3261 | 2 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcz:PCL1606_31290(869) | 881 | 57.4 | 3260 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptrt:HU722_0014050(825) | 861 | 58.0 | 3260 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pqi:KH389_12295(833) | 867 | 58.1 | 3258 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pum:HGP31_12800(865) | 877 | 56.7 | 3258 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbm:CL52_09565(845) | 875 | 56.3 | 3256 | 4 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > piz:LAB08_R20560(879) | 890 | 57.1 | 3256 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pke:DLD99_11110(845) | 868 | 58.1 | 3255 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfe:PSF113_2933(871) | 876 | 57.1 | 3254 | 2 | -- | K01971 | ligD | ligD2; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pgf:J0G10_12445(863) | 873 | 56.5 | 3254 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcg:AXG94_02520(865) | 872 | 56.7 | 3252 | 1 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pchl:LLJ08_10540(854) | 873 | 56.0 | 3251 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > poi:BOP93_13240(841) | 864 | 57.8 | 3248 | 1 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psh:Psest_2179(854) | 873 | 56.4 | 3246 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbz:GN234_03430(875) | 880 | 56.7 | 3245 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psec:CCOS191_2691(823) | 863 | 56.7 | 3245 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pman:OU5_5917(866) | 881 | 56.9 | 3244 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pstu:UIB01_11265(854) | 875 | 56.2 | 3243 | 2 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pze:HU754_018525(863) | 873 | 56.5 | 3243 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pphn:HU825_14215(854) | 876 | 56.2 | 3242 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > prh:LT40_12535(862) | 879 | 55.6 | 3241 | 1 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfv:Psefu_2816(852) | 866 | 56.4 | 3240 | 4 | -> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfit:KJY40_12285(848) | 868 | 57.1 | 3239 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfs:PFLU_2911(838) | 863 | 57.5 | 3239 | 3 | -> | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pkg:LW136_12060(854) | 874 | 56.1 | 3237 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > palv:KSS97_16010(872) | 877 | 56.4 | 3235 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pen:PSEEN2767(820) | 863 | 57.4 | 3235 | 3 | -- | K01971 | ligD | putative DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sdeg:GOM96_01210(854) | 874 | 56.4 | 3234 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phv:HU739_007090(873) | 883 | 55.8 | 3233 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > prhz:CRX69_17480(?) | 870 | 56.7 | 3233 | 0 | -- | - | |||
| > pgy:AWU82_18340(848) | 869 | 56.8 | 3232 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pff:PFLUOLIPICF724270(819) | 861 | 57.4 | 3231 | 0 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptol:I7845_13375(827) | 861 | 57.7 | 3231 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pasg:KSS96_14145(832) | 861 | 57.1 | 3229 | 2 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pazo:AYR47_21750(819) | 861 | 57.0 | 3228 | 1 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psil:PMA3_17285(911) | 922 | 55.7 | 3228 | 10 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfo:Pfl01_2097(848) | 870 | 57.5 | 3227 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfb:VO64_0156(832) | 862 | 57.7 | 3225 | 1 | -> | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfw:PF1751_v1c25520(819) | 861 | 57.1 | 3225 | 1 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbc:CD58_15050(875) | 880 | 56.4 | 3223 | 3 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psc:A458_10100(854) | 873 | 55.8 | 3222 | 1 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pkr:AYO71_18905(877) | 887 | 55.7 | 3220 | 1 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmam:KSS90_12530(823) | 861 | 56.7 | 3220 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmud:NCTC8068_02325(837) | 861 | 56.7 | 3220 | 1 | -> | K01971 | ligD | ligD_1; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pvk:EPZ47_15120(871) | 876 | 56.4 | 3218 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pata:JWU58_11345(874) | 884 | 55.8 | 3215 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > por:APT59_10325(858) | 872 | 56.0 | 3214 | 2 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > panr:A7J50_2741(824) | 862 | 57.8 | 3213 | 1 | -> | K01971 | ligD | Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pie:HU724_017310(874) | 884 | 55.7 | 3213 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plij:KQP88_08505(841) | 862 | 56.1 | 3212 | 2 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psih:LOY51_15505(822) | 863 | 56.7 | 3211 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psii:NF676_16195(877) | 887 | 55.7 | 3211 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcas:LOY40_15390(874) | 879 | 55.9 | 3210 | 8 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcuc:PSH97_11385(?) | 881 | 55.7 | 3210 | 0 | -- | - | |||