SSDB Best Search Result

Entry:thx:Thet_1965 (307 a.a.)
Name:DNA polymerase LigD, ligase domain protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 192 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307     2004     1.000      307     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307     1400     0.663      306     
afu:AF_1725 DNA ligase, putative                        K01971     313      808     0.401      317     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      676     0.363      306     
pjd:Pjdr2_1127 ATP dependent DNA ligase                            287      514     0.326      291     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      459     0.301      302     
phe:Phep_1702 DNA ligase D                              K01971     877      459     0.293      321     
bja:blr8031 ORF_ID:blr8031; similar to DNA ligase                  316      457     0.294      303     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      451     0.284      310     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      450     0.279      319     
kfl:Kfla_4705 DNA polymerase LigD, ligase domain protei K01971     318      449     0.304      312     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      443     0.325      311     
cpy:Cphy_1729 DNA ligase D                              K01971     813      438     0.319      323     
nca:Noca_1235 ATP dependent DNA ligase                  K01971     311      437     0.275      313     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      436     0.282      312     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      433     0.279      305     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      432     0.291      326     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      427     0.300      297     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      425     0.271      314     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      425     0.271      314     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      424     0.287      317     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      424     0.272      316     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      415     0.273      311     
sme:SM_b20685 putative DNA ligase                                  818      415     0.292      305     
swi:Swit_5282 DNA ligase D                              K01971     658      414     0.307      290     
msm:MSMEG_5570 DNA ligase                               K01971     755      411     0.280      318     
mac:MA_2571 DNA ligase (ATP)                            K10747     568      410     0.285      330     
dsy:DSY0616 hypothetical protein                        K01971     818      409     0.298      299     
sen:SACE_5682 DNA ligase, ATP-dependent                            333      407     0.287      303     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      403     0.280      318     
ase:ACPL_520 DNA ligase (ATP)                           K01971     304      402     0.267      307     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      402     0.268      314     
bpf:BpOF4_20089 ATP-dependent DNA ligase                           222      401     0.316      234     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      400     0.268      314     
pfu:PF1635 DNA ligase (lig)                             K10747     561      398     0.280      325     
mma:MM_2714 ATP-dependent DNA ligase                    K10747     568      398     0.285      330     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      397     0.285      330     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      396     0.263      315     
amd:AMED_5204 ATP-dependent DNA ligase                             314      394     0.269      301     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      393     0.285      298     
scl:sce3523 unnamed protein product; High confidence in K01971     762      390     0.270      315     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      388     0.303      304     
ssy:SLG_04290 putative DNA ligase                       K01971     835      384     0.285      284     
atu:Atu5051 ATP-dependent DNA ligase                    K01971     345      383     0.281      299     
sgr:SGR_6690 putative ATP-dependent DNA ligase          K01971     320      382     0.259      320     
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      378     0.253      304     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      378     0.274      321     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      375     0.271      329     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      374     0.277      329     
pab:PAB2002 lig DNA ligase                              K10747     559      373     0.271      329     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      372     0.303      317     
bsu:BSU20500 DNA ligase-like protein LigB                          270      371     0.292      288     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      370     0.286      304     
ret:RHE_PE00251 putative DNA ligase (ATP) protein       K01971     354      369     0.268      298     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      366     0.271      299     
pto:PTO0672 DNA ligase                                  K10747     590      363     0.303      320     
sco:SCO7345 probable ATP-dependent DNA ligase.          K01971     326      363     0.276      312     
pai:PAE0833 DNA ligase                                  K10747     584      361     0.269      320     
rle:pRL110115 putative DNA ligase                       K01971     346      360     0.270      300     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      360     0.271      325     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      359     0.272      287     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      359     0.253      308     
xau:Xaut_4365 DNA ligase D                              K01971     886      357     0.281      310     
sgu:SGLAU_02470 ATP-dependent DNA ligase                K01971     326      356     0.278      313     
ton:TON_1515 thermostable DNA ligase                    K10747     562      356     0.271      329     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      356     0.294      309     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      356     0.276      319     
chy:CHY_0026 putative DNA ligase, ATP-dependent                    270      353     0.284      289     
sma:SAVERM_1697 putative DNA ligase                                356      351     0.254      335     
ppu:PP_3260 DNA ligase D                                K01971     833      351     0.284      303     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      343     0.276      312     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      342     0.280      346     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      339     0.288      306     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      323     0.266      346     
sno:Snov_0819 DNA ligase D                              K01971     842      323     0.279      305     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      322     0.260      346     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      321     0.268      347     
hth:HTH_1466 DNA ligase                                            572      319     0.290      272     
oih:OB3034 hypothetical conserved protein               K01971     595      319     0.254      307     
rpa:TX73_018915 DNA ligase D                            K01971     914      316     0.288      316     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      311     0.297      337     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      305     0.241      320     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      303     0.271      354     
sro:Sros_6710 ATP-dependent DNA ligase                             346      302     0.254      331     
aae:aq_1394 DNA ligase (ATP dependent)                             585      302     0.265      325     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      300     0.285      298     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      298     0.256      305     
sto:STK_02230 DNA ligase                                K10747     600      294     0.277      296     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      291     0.256      344     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      290     0.258      314     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      290     0.275      262     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      286     0.260      350     
dre:556995 DNA ligase 1                                 K10747    1058      285     0.246      350     
tac:Ta1148 DNA ligase related protein                   K10747     588      282     0.282      323     
ola:101167483 DNA ligase 1                              K10747     993      281     0.243      354     
xtr:100271763 DNA ligase 1                              K10747    1040      281     0.249      354     
tca:658633 DNA ligase                                   K10747     756      279     0.258      349     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      279     0.278      353     
mth:MTH_1580 DNA ligase                                 K10747     561      278     0.259      263     
zga:ZOBELLIA_2113 DNA ligase                                       554      276     0.290      245     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      276     0.261      356     
xla:397978 DNA ligase 1                                 K10747    1070      276     0.249      354     
vvi:100266816 DNA ligase 6 isoform X1                             1449      274     0.249      370     
mdo:100616962 DNA ligase 1-like                                    632      274     0.256      332     
cin:100181519 DNA ligase 1-like                         K10747    1060      273     0.256      356     
dne:112995498 DNA ligase 1                              K10747     868      270     0.253      356     
pde:Pden_0412 ATP dependent DNA ligase                             514      270     0.257      303     
cpoc:100734013 DNA ligase 1                             K10747     919      269     0.261      356     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      268     0.256      356     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      268     0.256      356     
yli:2908208 DNA ligase 1                                K10747     711      267     0.276      304     
ssc:100520434 DNA ligase 1                              K10747     923      265     0.258      356     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      265     0.287      359     
kla:KLLA0_D01089g uncharacterized protein               K10777     907      264     0.287      324     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      263     0.261      356     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      262     0.261      356     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      260     0.272      302     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      259     0.256      359     
nve:5510104 DNA ligase 1                                K10747     959      259     0.259      355     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      258     0.253      356     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      258     0.253      356     
pmur:107285325 DNA ligase 1                             K10747     944      257     0.262      355     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      257     0.253      356     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      257     0.253      356     
mmu:16881 DNA ligase 1                                  K10747     916      257     0.258      356     
bta:100124507 DNA ligase 1                              K10747     916      256     0.253      356     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      255     0.270      304     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      255     0.256      356     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      253     0.283      325     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      253     0.247      336     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      251     0.250      356     
rno:81513 DNA ligase 1                                  K10747     913      249     0.253      356     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      248     0.251      359     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      248     0.244      336     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      247     0.244      352     
amj:102566879 DNA ligase 1                              K10747     954      247     0.237      354     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      247     0.268      366     
osa:4324149 DNA ligase 6 isoform X1                               1404      246     0.242      355     
cne:CNI04170 DNA ligase, putative                       K10747     803      245     0.277      303     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      243     0.255      337     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      243     0.252      313     
csv:101213447 DNA ligase 1                              K10747     801      242     0.249      350     
ehi:EHI_111060 DNA ligase                               K10747     685      242     0.263      315     
mdm:103426184 DNA ligase 6                                        1407      240     0.237      363     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      240     0.268      205     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      239     0.290      231     
nta:107805422 DNA ligase 6 isoform X1                             1426      238     0.236      365     
mtr:11410741 DNA ligase 1 isoform X1                    K10747     773      238     0.249      350     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      238     0.247      348     
tcr:506835.120 DNA ligase I                             K10747     701      237     0.233      335     
sot:102604298 DNA ligase 1-like                         K10747     802      236     0.254      351     
sly:101262281 DNA ligase 1                              K10747     802      236     0.256      352     
pif:PITG_04709 DNA ligase, putative                               3896      235     0.261      357     
rcu:8265013 DNA ligase 6 isoform X1                               1394      235     0.253      372     
cit:102618631 DNA ligase 6 isoform X1                             1402      232     0.243      371     
zma:103651343 DNA ligase 6                                        1397      230     0.236      356     
pti:PHATR_10585 hypothetical protein                               337      229     0.273      289     
hal:VNG_0881G DNA ligase                                K10747     561      228     0.234      325     
ath:AT1G66730 DNA LIGASE 6                                        1396      226     0.261      372     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      222     0.222      351     
gmx:100807673 DNA ligase 6 isoform X1                             1402      221     0.247      373     
dme:Dmel_CG5602 DNA ligase 1                                       747      221     0.261      318     
smo:SELMODRAFT_119719 hypothetical protein                         638      220     0.229      354     
hma:rrnAC0463 DNA ligase                                K10747     554      220     0.235      324     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      216     0.239      380     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      216     0.233      317     
smm:Smp_019840.1 DNA ligase I, putative                            783      216     0.266      282     
tps:THAPSDRAFT_268404 ligase                            K10747     633      215     0.270      318     
mgr:MGG_06370 DNA ligase 1                              K10747     896      215     0.251      307     
ncr:NCU06481 DNA ligase                                 K10747     923      214     0.272      312     
xom:XOO1771 DNA ligase                                             534      214     0.258      252     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      213     0.256      340     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      211     0.260      311     
fgr:FGSG_05453 DNA ligase                               K10747     867      209     0.253      288     
tva:5466150 DNA ligase 1/3 family member family                    679      208     0.262      294     
ppp:112290811 DNA ligase 1                              K10747     776      205     0.247      352     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      204     0.253      288     
ani:ANIA_06069 hypothetical protein                     K10747     932      204     0.245      380     
sce:YOR005C DNA ligase (ATP) DNL4                       K10777     944      204     0.254      311     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      201     0.248      270     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      191     0.234      325     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      191     0.276      257     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      186     0.211      336     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      182     0.210      353     
tgo:7896565 DNA ligase 1, putative                                1331      173     0.218      308     
clv:102083602 DNA ligase 3                              K10776     994      163     0.274      208     
tru:101068311 DNA ligase 3                              K10776     998      157     0.243      300     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      153     0.264      208     
gla:GL50803_007649 DNA ligase (ATP)                                810      148     0.209      349     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      135     0.275      131     
vpa:VP1477 DNA ligase                                   K26441     280      113     0.246      211     
vch:VC_2238 conserved hypothetical protein                         281      101     0.257      109     

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