KEGG   PATHWAY: gab00040
Entry
gab00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Gossypium arboreum (tree cotton)
Class
Metabolism; Carbohydrate metabolism
Pathway map
gab00040  Pentose and glucuronate interconversions
gab00040

Module
gab_M00081  Pectin degradation [PATH:gab00040]
Organism
Gossypium arboreum (tree cotton) [GN:gab]
Gene
108476487  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
108471455  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108472613  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108474906  pectinesterase PPME1-like [KO:K01051] [EC:3.1.1.11]
108474908  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
108474911  pectinesterase PPME1-like [KO:K01051] [EC:3.1.1.11]
108474935  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
108474954  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108478621  probable pectinesterase 53 isoform X1 [KO:K01051] [EC:3.1.1.11]
108481225  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
108481226  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
108481372  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
108482538  probable pectinesterase/pectinesterase inhibitor 33 [KO:K01051] [EC:3.1.1.11]
108480443  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108472831  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
108468630  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108468679  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
108472681  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108481599  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108481862  pectinesterase PPME1-like [KO:K01051] [EC:3.1.1.11]
108481863  pectinesterase PPME1-like [KO:K01051] [EC:3.1.1.11]
108477703  probable pectinesterase/pectinesterase inhibitor 40 [KO:K01051] [EC:3.1.1.11]
108478949  pectinesterase 1-like [KO:K01051] [EC:3.1.1.11]
108477506  pectinesterase PPME1-like [KO:K01051] [EC:3.1.1.11]
108477511  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
108484127  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
108477702  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108488172  probable pectinesterase/pectinesterase inhibitor 58 [KO:K01051] [EC:3.1.1.11]
108488173  probable pectinesterase/pectinesterase inhibitor 58 [KO:K01051] [EC:3.1.1.11]
108472948  probable pectinesterase/pectinesterase inhibitor 41 [KO:K01051] [EC:3.1.1.11]
108474040  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108488833  pectinesterase [KO:K01051] [EC:3.1.1.11]
108468242  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108467469  probable pectinesterase 53 isoform X1 [KO:K01051] [EC:3.1.1.11]
108472117  putative pectinesterase/pectinesterase inhibitor 28 [KO:K01051] [EC:3.1.1.11]
108487874  pectinesterase/pectinesterase inhibitor-like [KO:K01051] [EC:3.1.1.11]
108466630  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108485801  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
108478443  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
108477058  probable pectinesterase 53 isoform X1 [KO:K01051] [EC:3.1.1.11]
108472370  probable pectinesterase/pectinesterase inhibitor 32 [KO:K01051] [EC:3.1.1.11]
108485937  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
108458151  pectinesterase 2 [KO:K01051] [EC:3.1.1.11]
108458180  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108454072  pectinesterase 31 [KO:K01051] [EC:3.1.1.11]
108465558  pectinesterase QRT1-like isoform X1 [KO:K01051] [EC:3.1.1.11]
108451444  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108462188  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108459473  probable pectinesterase/pectinesterase inhibitor 36 [KO:K01051] [EC:3.1.1.11]
108458283  pectinesterase [KO:K01051] [EC:3.1.1.11]
108465916  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
108455247  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108455248  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108455249  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108455250  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108455251  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108455253  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108455254  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
108463122  putative pectinesterase/pectinesterase inhibitor 22 [KO:K01051] [EC:3.1.1.11]
108452700  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
108455703  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
108473078  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
108482552  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108467184  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
108471652  probable pectate lyase 19 [KO:K01728] [EC:4.2.2.2]
108479087  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
108479088  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
108481829  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108479606  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108480511  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
108475281  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108480308  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
108483472  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108469529  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
108457067  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
108452557  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108466606  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
108486033  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
108487209  probable pectate lyase 1 isoform X1 [KO:K01728] [EC:4.2.2.2]
108474619  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
108485208  pectate lyase [KO:K01728] [EC:4.2.2.2]
108489417  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
108477117  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
108489711  probable pectate lyase 18 isoform X1 [KO:K01728] [EC:4.2.2.2]
108485039  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
108478431  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
108486894  probable pectate lyase 1 [KO:K01728] [EC:4.2.2.2]
108455066  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108486586  probable pectate lyase 13 [KO:K01728] [EC:4.2.2.2]
108455156  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108485063  probable pectate lyase 16 [KO:K01728] [EC:4.2.2.2]
108457162  probable pectate lyase 1 [KO:K01728] [EC:4.2.2.2]
108451299  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108451300  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
108454131  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108459455  probable pectate lyase 20 [KO:K01728] [EC:4.2.2.2]
108460565  probable pectate lyase 16 isoform X1 [KO:K01728] [EC:4.2.2.2]
108463557  pectate lyase [KO:K01728] [EC:4.2.2.2]
108452347  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108451893  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
108452457  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
108464484  probable pectate lyase 12 [KO:K01728] [EC:4.2.2.2]
108471912  polygalacturonase [KO:K01184] [EC:3.2.1.15]
108468433  polygalacturonase QRT2 [KO:K01184] [EC:3.2.1.15]
108477496  polygalacturonase QRT2-like [KO:K01184] [EC:3.2.1.15]
108488326  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
108488329  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
108484850  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
108455158  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
108488725  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
108455163  uncharacterized protein LOC108455163 [KO:K01184] [EC:3.2.1.15]
108459660  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108462369  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108456094  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108463513  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108463516  polygalacturonase-like isoform X1 [KO:K01184] [EC:3.2.1.15]
108463522  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108463539  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108459561  polygalacturonase At1g48100 [KO:K01184] [EC:3.2.1.15]
108463602  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108456002  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
108452665  polygalacturonase [KO:K01213] [EC:3.2.1.67]
108452693  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108452708  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108452710  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108451058  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108451120  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108452820  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108465218  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108465414  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108466062  exopolygalacturonase clone GBGE184-like [KO:K01213] [EC:3.2.1.67]
108466178  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108463671  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108474922  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108488372  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108473940  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108481373  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108471630  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108479467  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108481671  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108474157  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108473202  polygalacturonase [KO:K01213] [EC:3.2.1.67]
108477666  LOW QUALITY PROTEIN: exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108488807  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108488829  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108487871  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108488530  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108466863  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108455076  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108455077  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108455144  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108452405  polygalacturonase At1g48100 [KO:K01213] [EC:3.2.1.67]
108466243  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108462609  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
108454400  glucuronokinase 1-like [KO:K16190] [EC:2.7.1.43]
108467534  UDP-sugar pyrophosphorylase-like [KO:K12447] [EC:2.7.7.64]
108462975  UDP-sugar pyrophosphorylase-like isoform X1 [KO:K12447] [EC:2.7.7.64]
108479563  UDP-glucose 6-dehydrogenase 1-like [KO:K00012] [EC:1.1.1.22]
108483727  UDP-glucose 6-dehydrogenase 5-like [KO:K00012] [EC:1.1.1.22]
108479786  UDP-glucose 6-dehydrogenase 2 [KO:K00012] [EC:1.1.1.22]
108487526  UDP-glucose 6-dehydrogenase 5-like [KO:K00012] [EC:1.1.1.22]
108473554  UDP-glucose 6-dehydrogenase 1 [KO:K00012] [EC:1.1.1.22]
108461820  UDP-glucose 6-dehydrogenase 1 isoform X1 [KO:K00012] [EC:1.1.1.22]
108474443  UTP--glucose-1-phosphate uridylyltransferase 1-like [KO:K00963] [EC:2.7.7.9]
108469784  UTP--glucose-1-phosphate uridylyltransferase-like [KO:K00963] [EC:2.7.7.9]
108474100  UTP--glucose-1-phosphate uridylyltransferase-like isoform X1 [KO:K00963] [EC:2.7.7.9]
108466015  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
108460560  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
108480021  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
108482739  aldo-keto reductase family 4 member C9 [KO:K00002] [EC:1.1.1.2]
108476403  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
108462918  aldose reductase [KO:K00002] [EC:1.1.1.2]
108456068  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
108472509  aldo-keto reductase family 4 member C8-like [KO:K00002] [EC:1.1.1.2]
108474545  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
108459365  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
108460556  aldo-keto reductase family 4 member C9-like isoform X1 [KO:K00002] [EC:1.1.1.2]
108460557  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
108457895  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
108479667  ribulose-phosphate 3-epimerase, chloroplastic-like isoform X1 [KO:K01783] [EC:5.1.3.1]
108486705  ribulose-phosphate 3-epimerase, chloroplastic isoform X1 [KO:K01783] [EC:5.1.3.1]
108468782  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
108452912  xylulose kinase [KO:K00854] [EC:2.7.1.17]
108485750  xylose isomerase-like [KO:K01805] [EC:5.3.1.5]
108453510  xylose isomerase isoform X1 [KO:K01805] [EC:5.3.1.5]
108479470  sorbitol dehydrogenase-like [KO:K00008] [EC:1.1.1.14]
108477144  sorbitol dehydrogenase-like isoform X1 [KO:K00008] [EC:1.1.1.14]
108454113  sorbitol dehydrogenase [KO:K00008] [EC:1.1.1.14]
108486144  FGGY carbohydrate kinase domain-containing protein isoform X1 [KO:K00875] [EC:2.7.1.47]
108461155  xylulose kinase isoform X1 [KO:K22935] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
gab00010  Glycolysis / Gluconeogenesis
gab00020  Citrate cycle (TCA cycle)
gab00030  Pentose phosphate pathway
gab00052  Galactose metabolism
gab00053  Ascorbate and aldarate metabolism
gab00500  Starch and sucrose metabolism
gab00520  Amino sugar and nucleotide sugar metabolism
gab00561  Glycerolipid metabolism
gab00562  Inositol phosphate metabolism
gab00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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