Entry
Name
NOD-like receptor signaling pathway - Seriola lalandi dorsalis (Yellowtail amberjack)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
slal04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Seriola lalandi dorsalis (Yellowtail amberjack) [GN:
slal ]
Gene
111664422 nod1; nucleotide-binding oligomerization domain-containing protein 1 [KO:K08727 ]
111665614 LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit-like [KO:K02580 ]
111651623 nucleotide-binding oligomerization domain-containing protein 2-like [KO:K10165 ]
111672267 nod2; nucleotide-binding oligomerization domain-containing protein 2 isoform X1 [KO:K10165 ]
111671826 tab1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403 ]
111645234 tab2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
111650181 tab3; TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1 [KO:K12793 ]
111656635 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
111650701 gabarap; gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
111669946 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
111647741 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
111655782 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
111670232 microtubule-associated proteins 1A/1B light chain 3C-like [KO:K10435 ]
111644392 map1lc3a; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435 ]
111661091 ranBP-type and C3HC4-type zinc finger-containing protein 1-like [KO:K20894 ]
111665751 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
111649131 card9; caspase recruitment domain-containing protein 9 [KO:K12794 ]
111654506 tank; TRAF family member-associated NF-kappa-B activator [KO:K12650 ]
111659123 trpm7; transient receptor potential cation channel subfamily M member 7 isoform X1 [KO:K04982 ] [EC:2.7.11.1 ]
111664131 gprc6a; G-protein coupled receptor family C group 6 member A [KO:K04622 ]
111645524 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
111657998 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
111672617 G-protein coupled receptor family C group 6 member A-like isoform X1 [KO:K04622 ]
111672675 plcb1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
111672676 plcb4; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
111653469 plcb3; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
111653189 LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor type 1-like [KO:K04958 ]
111673377 itpr3; inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
111659977 vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
111657081 voltage-dependent anion-selective channel protein 2-like [KO:K15040 ]
111665991 vdac3; voltage-dependent anion-selective channel protein 3 isoform X1 [KO:K15041 ]
111666020 voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
111658957 mcu; calcium uniporter protein, mitochondrial isoform X1 [KO:K20858 ]
111669344 brcc3; lys-63-specific deubiquitinase BRCC36 [KO:K11864 ] [EC:3.4.19.-]
111650471 NACHT, LRR and PYD domains-containing protein 1b allele 2-like [KO:K12801 ]
111667008 pstpip1; proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
111659169 proline-serine-threonine phosphatase-interacting protein 1-like [KO:K12804 ]
111672441 signal transducer and activator of transcription 1-alpha/beta-like isoform X1 [KO:K11220 ]
111667430 signal transducer and activator of transcription 1-alpha/beta-like [KO:K11220 ]
111667811 signal transducer and activator of transcription 1-alpha/beta-like [KO:K11221 ]
111656280 myeloid differentiation primary response protein MyD88-like [KO:K04729 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
slal04620 Toll-like receptor signaling pathway
KO pathway
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