KEGG   PATHWAY: pleu04360
Entry
pleu04360                   Pathway                                
Name
Axon guidance - Peromyscus leucopus (white-footed mouse)
Description
Axon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are read by growth cone receptors, and signal transduction pathways downstream of these receptors converge onto the Rho GTPases to elicit changes in cytoskeletal organization that determine which way the growth cone will turn.
Class
Organismal Systems; Development and regeneration
Pathway map
pleu04360  Axon guidance
pleu04360

Other DBs
GO: 0007411
Organism
Peromyscus leucopus (white-footed mouse) [GN:pleu]
Gene
114680645  Rac3; ras-related C3 botulinum toxin substrate 3 isoform X1 [KO:K07861]
114680776  Ntn3; netrin-3 [KO:K06844]
114680796  Pdpk1; 3-phosphoinositide-dependent protein kinase 1 isoform X1 [KO:K06276] [EC:2.7.11.1]
114681035  Nfatc3; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
114681065  Pard6a; partitioning defective 6 homolog alpha isoform X1 [KO:K06093]
114681089  Plxna1; plexin-A1 [KO:K06820]
114681705  Unc5c; netrin receptor UNC5C isoform X1 [KO:K07521]
114681722  Bmpr1b; bone morphogenetic protein receptor type-1B isoform X1 [KO:K13578] [EC:2.7.11.30]
114681835  Src; proto-oncogene tyrosine-protein kinase Src isoform X1 [KO:K05704] [EC:2.7.10.2]
114681851  Myl9; myosin regulatory light polypeptide 9 [KO:K12755]
114681906  Ptpn11; LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 11 [KO:K07293] [EC:3.1.3.48]
114681938  Plxnc1; LOW QUALITY PROTEIN: plexin-C1 [KO:K06572]
114682227  Camk2d; calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1 [KO:K04515] [EC:2.7.11.17]
114682732  Mapk1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
114683218  Sema6c; LOW QUALITY PROTEIN: semaphorin-6C [KO:K06842]
114683255  Ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
114683712  Rgs3; regulator of G-protein signaling 3 isoform X1 [KO:K07524]
114683843  Ilk; integrin-linked protein kinase isoform X1 [KO:K06272] [EC:2.7.11.1]
114683886  Slit3; slit homolog 3 protein [KO:K06850]
114684014  Robo3; roundabout homolog 3 isoform X1 [KO:K06755]
114684032  Pik3cd; LOW QUALITY PROTEIN: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
114684134  Efna2; ephrin-A2 [KO:K05462]
114684426  Enah; protein enabled homolog isoform X1 [KO:K05746]
114684433  Nfatc2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332]
114684638  Pak4; serine/threonine-protein kinase PAK 4 [KO:K05734] [EC:2.7.11.1]
114684666  Ephb3; ephrin type-B receptor 3 isoform X1 [KO:K05112] [EC:2.7.10.1]
114685088  Sema6b; LOW QUALITY PROTEIN: semaphorin-6B [KO:K06842]
114685127  [KO:K02833]
114685750  Bmpr2; bone morphogenetic protein receptor type-2 [KO:K04671] [EC:2.7.11.30]
114686001  Ssh3; protein phosphatase Slingshot homolog 3 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
114686002  Rhod; rho-related GTP-binding protein RhoD [KO:K07530]
114686570  Ppp3r2; calcineurin subunit B type 2 [KO:K06268]
114686780  Ephb4; ephrin type-B receptor 4 [KO:K05113] [EC:2.7.10.1]
114686974  Ssh1; LOW QUALITY PROTEIN: protein phosphatase Slingshot homolog 1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
114687180  Rras; ras-related protein R-Ras isoform X1 [KO:K07829]
114687377  Sema3e; semaphorin-3E [KO:K06840]
114687398  Sema3a; semaphorin-3A [KO:K06840]
114687408  Sema3d; semaphorin-3D [KO:K06840]
114688100  [KO:K05128] [EC:2.7.10.1]
114688488  [KO:K02833]
114688966  Pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta isoform X1 [KO:K02649]
114689453  Unc5a; netrin receptor UNC5A isoform X4 [KO:K07521]
114689485  Sema4d; semaphorin-4D isoform X1 [KO:K06521]
114689590  Srgap3; SLIT-ROBO Rho GTPase-activating protein 3 isoform X1 [KO:K07526]
114689636  Raf1; RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
114689656  Cxcl12; stromal cell-derived factor 1 isoform X1 [KO:K10031]
114689766  Shh; sonic hedgehog protein [KO:K11988]
114690209  Dcc; netrin receptor DCC isoform X1 [KO:K06765]
114690349  Sema7a; semaphorin-7A isoform X1 [KO:K06529]
114690439  Prkca; protein kinase C alpha type [KO:K02677] [EC:2.7.11.13]
114690775  Sema4c; LOW QUALITY PROTEIN: semaphorin-4C [KO:K06521]
114690832  Nck2; cytoplasmic protein NCK2 [KO:K19862]
114690889  Slit2; slit homolog 2 protein isoform X1 [KO:K06839]
114690966  Trpc1; short transient receptor potential channel 1 isoform X1 [KO:K04964]
114691047  Plxna4; plexin-A4 [KO:K06820]
114691077  Smo; smoothened homolog [KO:K06226]
114691095  Lrrc4; leucine-rich repeat-containing protein 4 [KO:K16351]
114691150  Arhgef12; rho guanine nucleotide exchange factor 12 isoform X1 [KO:K07532]
114691309  [KO:K04393]
114691464  Ssh2; protein phosphatase Slingshot homolog 2 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
114692035  [KO:K20013]
114692579  Plcg1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 [KO:K01116] [EC:3.1.4.11]
114692673  Pard6b; partitioning defective 6 homolog beta [KO:K06093]
114693021  Plxnb2; plexin-B2 [KO:K06821]
114693142  Ntn1; netrin-1 [KO:K06843]
114693169  Efnb3; ephrin-B3 isoform X1 [KO:K05463]
114693290  Srgap1; SLIT-ROBO Rho GTPase-activating protein 1 isoform X2 [KO:K07526]
114693369  Cfl2; cofilin-2 [KO:K05765]
114693493  [KO:K02833]
114693532  Ryk; LOW QUALITY PROTEIN: tyrosine-protein kinase RYK [KO:K05128] [EC:2.7.10.1]
114693538  Ephb1; ephrin type-B receptor 1 [KO:K05110] [EC:2.7.10.1]
114693548  Nck1; cytoplasmic protein NCK1 isoform X1 [KO:K07365]
114693559  Pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
114693595  Hras; GTPase HRas isoform X1 [KO:K02833]
114693645  Limk1; LIM domain kinase 1 isoform X1 [KO:K05743] [EC:2.7.11.1]
114693978  Camk2b; calcium/calmodulin-dependent protein kinase type II subunit beta isoform X7 [KO:K04515] [EC:2.7.11.17]
114694032  Limk2; LIM domain kinase 2 isoform X1 [KO:K05744] [EC:2.7.11.1]
114694231  Rac2; ras-related C3 botulinum toxin substrate 2 [KO:K07860]
114694429  Sema4f; semaphorin-4F [KO:K06521]
114694721  Met; hepatocyte growth factor receptor isoform X1 [KO:K05099] [EC:2.7.10.1]
114694759  Sema6a; semaphorin-6A isoform X1 [KO:K06842]
114694904  Pard6g; partitioning defective 6 homolog gamma [KO:K06093]
114694967  Boc; brother of CDO isoform X1 [KO:K20020]
114695117  Efnb2; ephrin-B2 [KO:K05463]
114695335  Pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
114695415  Epha7; ephrin type-A receptor 7 isoform X1 [KO:K05108] [EC:2.7.10.1]
114695867  Trpc4; short transient receptor potential channel 4 isoform X1 [KO:K04967]
114696180  Sema4b; semaphorin-4B isoform X1 [KO:K06521]
114696193  Fes; tyrosine-protein kinase Fes/Fps isoform X3 [KO:K07527] [EC:2.7.10.2]
114696332  Efna5; ephrin-A5 isoform X1 [KO:K05462]
114696413  [KO:K12757]
114696416  [KO:K12757]
114696553  [KO:K02833]
114696616  Dpysl5; dihydropyrimidinase-related protein 5 [KO:K07529]
114696818  Robo1; LOW QUALITY PROTEIN: roundabout homolog 1 [KO:K06753]
114696822  Robo2; LOW QUALITY PROTEIN: roundabout homolog 2 [KO:K06754]
114696882  Fyn; tyrosine-protein kinase Fyn isoform X1 [KO:K05703] [EC:2.7.10.2]
114696964  Cxcr4; C-X-C chemokine receptor type 4 isoform X1 [KO:K04189]
114697206  Cdc42; cell division control protein 42 homolog isoform X1 [KO:K04393]
114697207  Wnt4; protein Wnt-4 [KO:K00408]
114697209  Epha8; ephrin type-A receptor 8 [KO:K05109] [EC:2.7.10.1]
114697213  Ephb2; ephrin type-B receptor 2 isoform X1 [KO:K05111] [EC:2.7.10.1]
114697457  Plcg2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 [KO:K05859] [EC:3.1.4.11]
114697888  Ngef; ephexin-1 isoform X1 [KO:K07525]
114698013  Epha1; LOW QUALITY PROTEIN: ephrin type-A receptor 1 [KO:K05102] [EC:2.7.10.1]
114698022  Ephb6; LOW QUALITY PROTEIN: ephrin type-B receptor 6 [KO:K05114] [EC:2.7.10.1]
114698058  Srgap2; SLIT-ROBO Rho GTPase-activating protein 2 isoform X1 [KO:K07526]
114698172  Rock1; rho-associated protein kinase 1 [KO:K04514] [EC:2.7.11.1]
114698311  Trpc5; short transient receptor potential channel 5 [KO:K04968]
114698321  Pak3; serine/threonine-protein kinase PAK 3 isoform X1 [KO:K05733] [EC:2.7.11.1]
114698582  Nras; GTPase NRas [KO:K07828]
114698679  Pak1; serine/threonine-protein kinase PAK 1 [KO:K04409] [EC:2.7.11.1]
114698768  Ppp3cc; serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform [KO:K04348] [EC:3.1.3.16]
114698806  [KO:K04348] [EC:3.1.3.16]
114698838  Rock2; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
114698944  Lrrc4c; leucine-rich repeat-containing protein 4C [KO:K07523]
114699615  Sema6d; semaphorin-6D isoform X1 [KO:K06842]
114699956  Ntng1; LOW QUALITY PROTEIN: netrin-G1 [KO:K07522]
114699988  Gnai3; guanine nucleotide-binding protein G(i) subunit alpha [KO:K04630]
114700033  Epha6; LOW QUALITY PROTEIN: ephrin type-A receptor 6 [KO:K05107] [EC:2.7.10.1]
114700042  Epha3; ephrin type-A receptor 3 [KO:K05104] [EC:2.7.10.1]
114700086  Cdk5; cyclin-dependent-like kinase 5 [KO:K02090] [EC:2.7.11.22]
114700198  Ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
114700207  Camk2g; calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X1 [KO:K04515] [EC:2.7.11.17]
114700565  Ntn4; netrin-4 isoform X1 [KO:K06845]
114700757  Wnt5b; protein Wnt-5b [KO:K00444]
114700875  Epha2; ephrin type-A receptor 2 isoform X1 [KO:K05103] [EC:2.7.10.1]
114700910  [KO:K04513]
114701049  Ablim1; actin-binding LIM protein 1 isoform X2 [KO:K07520]
114701275  [KO:K04393]
114701479  Gsk3b; glycogen synthase kinase-3 beta isoform X1 [KO:K03083] [EC:2.7.11.26]
114701844  Sema5a; LOW QUALITY PROTEIN: semaphorin-5A [KO:K06841]
114702054  Ablim2; actin-binding LIM protein 2 isoform X1 [KO:K07520]
114702120  Wnt5a; protein Wnt-5a isoform X1 [KO:K00444]
114702382  Plxna2; LOW QUALITY PROTEIN: plexin-A2 [KO:K06820]
114702682  [KO:K07528]
114702766  Ntng2; netrin-G2 isoform X1 [KO:K16359]
114703169  Efnb1; ephrin-B1 [KO:K05463]
114703664  Pak5; serine/threonine-protein kinase PAK 5 isoform X1 [KO:K05736] [EC:2.7.11.1]
114703784  Abl1; tyrosine-protein kinase ABL1 isoform X1 [KO:K06619] [EC:2.7.10.2]
114703850  Pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
114704332  Mapk3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
114704659  Ptk2; focal adhesion kinase 1 isoform X1 [KO:K05725] [EC:2.7.10.2]
114704740  Unc5b; netrin receptor UNC5B isoform X1 [KO:K07521]
114704837  Sema5b; semaphorin-5B isoform X1 [KO:K06841]
114704956  [KO:K05765]
114705188  Plxnb1; plexin-B1 [KO:K06821]
114705216  Rhoa; transforming protein RhoA [KO:K04513]
114705241  Sema3f; LOW QUALITY PROTEIN: semaphorin-3F [KO:K06840]
114705519  Ppp3r1; calcineurin subunit B type 1 isoform X2 [KO:K06268]
114705769  Nrp1; neuropilin-1 isoform X1 [KO:K06724]
114705775  Pard3; partitioning defective 3 homolog isoform X1 [KO:K04237]
114705780  Itgb1; integrin beta-1 isoform X1 [KO:K05719]
114705916  Pak6; serine/threonine-protein kinase PAK 6 [KO:K05735] [EC:2.7.11.1]
114706178  Plxnb3; plexin-B3 isoform X1 [KO:K06821]
114706196  L1cam; neural cell adhesion molecule L1 isoform X1 [KO:K06550]
114706204  Plxna3; plexin-A3 isoform X1 [KO:K06820]
114706795  Epha4; LOW QUALITY PROTEIN: ephrin type-A receptor 4 [KO:K05105] [EC:2.7.10.1]
114706889  Slit1; slit homolog 1 protein [KO:K06838]
114706924  Pik3r3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
114707171  Trpc3; short transient receptor potential channel 3 isoform X1 [KO:K04966]
114707239  Lrig2; leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1 [KO:K24609]
114707293  Fzd3; frizzled-3 isoform X1 [KO:K02329]
114707312  Dpysl2; dihydropyrimidinase-related protein 2 isoform X1 [KO:K07528]
114707396  Camk2a; LOW QUALITY PROTEIN: calcium/calmodulin-dependent protein kinase type II subunit alpha [KO:K04515] [EC:2.7.11.17]
114707401  Ablim3; actin-binding LIM protein 3 isoform X1 [KO:K07520]
114707535  Rac1; ras-related C3 botulinum toxin substrate 1 isoform X1 [KO:K04392]
114707913  Efna4; LOW QUALITY PROTEIN: ephrin-A4 [KO:K05462]
114707937  Efna1; ephrin-A1 isoform X1 [KO:K05462]
114707941  Efna3; ephrin-A3 isoform X1 [KO:K05462]
114707998  Trpc6; short transient receptor potential channel 6 isoform X1 [KO:K04969]
114708117  Sema4g; semaphorin-4G [KO:K06521]
114708190  Sema3g; semaphorin-3G isoform X1 [KO:K06840]
114708222  Sema3c; semaphorin-3C [KO:K06840]
114708228  Gnai1; guanine nucleotide-binding protein G(i) subunit alpha-1 [KO:K04630]
114708277  Prkcz; LOW QUALITY PROTEIN: protein kinase C zeta type [KO:K18952] [EC:2.7.11.13]
114708424  Ptch1; protein patched homolog 1 isoform X1 [KO:K06225]
114708477  Kras; GTPase KRas isoform X2 [KO:K07827]
114708479  Unc5d; netrin receptor UNC5D isoform X1 [KO:K07521]
114708570  Rnd1; rho-related GTP-binding protein Rho6 [KO:K07531]
114708726  Nfatc4; nuclear factor of activated T-cells, cytoplasmic 4 [KO:K17334]
114708914  Neo1; neogenin isoform X1 [KO:K06766]
114709166  Cfl1; cofilin-1 [KO:K05765]
114709384  Epha5; ephrin type-A receptor 5 isoform X1 [KO:K05106] [EC:2.7.10.1]
114709442  Rgma; repulsive guidance molecule A [KO:K23096]
114709820  Bmp7; bone morphogenetic protein 7 [KO:K16621]
114710030  Pak2; serine/threonine-protein kinase PAK 2 [KO:K04410] [EC:2.7.11.1]
114710510  Rasa1; ras GTPase-activating protein 1 [KO:K04352]
114710523  [KO:K04371] [EC:2.7.11.24]
114710969  Gnai2; guanine nucleotide-binding protein G(i) subunit alpha-2 [KO:K04630]
114710973  Sema3b; semaphorin-3B isoform X1 [KO:K06840]
Compound
C00076  Calcium cation
Reference
  Authors
Guan KL, Rao Y.
  Title
Signalling mechanisms mediating neuronal responses to guidance cues.
  Journal
Nat Rev Neurosci 4:941-56 (2003)
DOI:10.1038/nrn1254
Reference
  Authors
Govek EE, Newey SE, Van Aelst L.
  Title
The role of the Rho GTPases in neuronal development.
  Journal
Genes Dev 19:1-49 (2005)
DOI:10.1101/gad.1256405
Reference
  Authors
Huber AB, Kolodkin AL, Ginty DD, Cloutier JF.
  Title
Signaling at the growth cone: ligand-receptor complexes and the control of axon growth and guidance.
  Journal
Annu Rev Neurosci 26:509-63 (2003)
DOI:10.1146/annurev.neuro.26.010302.081139
Reference
  Authors
Negishi M, Oinuma I, Katoh H.
  Title
Plexins: axon guidance and signal transduction.
  Journal
Cell Mol Life Sci 62:1363-71 (2005)
DOI:10.1007/s00018-005-5018-2
Reference
  Authors
Huot J.
  Title
Ephrin signaling in axon guidance.
  Journal
Prog Neuropsychopharmacol Biol Psychiatry 28:813-8 (2004)
DOI:10.1016/j.pnpbp.2004.05.025
Reference
  Authors
Patel BN, Van Vactor DL.
  Title
Axon guidance: the cytoplasmic tail.
  Journal
Curr Opin Cell Biol 14:221-9 (2002)
DOI:10.1016/S0955-0674(02)00308-3
Reference
  Authors
Yu TW, Bargmann CI.
  Title
Dynamic regulation of axon guidance.
  Journal
Nat Neurosci 4 Suppl:1169-76 (2001)
DOI:10.1038/nn748
Reference
  Authors
Dickson BJ.
  Title
Molecular mechanisms of axon guidance.
  Journal
Science 298:1959-64 (2002)
DOI:10.1126/science.1072165
Reference
  Authors
Barallobre MJ, Pascual M, Del Rio JA, Soriano E.
  Title
The Netrin family of guidance factors: emphasis on Netrin-1 signalling.
  Journal
Brain Res Brain Res Rev 49:22-47 (2005)
DOI:10.1016/j.brainresrev.2004.11.003
Reference
  Authors
Sabatier C, Plump AS, Le Ma, Brose K, Tamada A, Murakami F, Lee EY, Tessier-Lavigne M.
  Title
The divergent Robo family protein rig-1/Robo3 is a negative regulator of slit responsiveness required for midline crossing by commissural axons.
  Journal
Cell 117:157-69 (2004)
DOI:10.1016/S0092-8674(04)00303-4
Reference
  Authors
Fujita Y, Yamashita T
  Title
Axon growth inhibition by RhoA/ROCK in the central nervous system.
  Journal
Front Neurosci 8:338 (2014)
DOI:10.3389/fnins.2014.00338
Reference
  Authors
Yamashita T, Mueller BK, Hata K
  Title
Neogenin and repulsive guidance molecule signaling in the central nervous system.
  Journal
Curr Opin Neurobiol 17:29-34 (2007)
DOI:10.1016/j.conb.2006.12.001
Reference
  Authors
van Erp S, van den Heuvel DMA, Fujita Y, Robinson RA, Hellemons AJCGM, Adolfs Y, Van Battum EY, Blokhuis AM, Kuijpers M, Demmers JAA, Hedman H, Hoogenraad CC, Siebold C, Yamashita T, Pasterkamp RJ
  Title
Lrig2 Negatively Regulates Ectodomain Shedding of Axon Guidance Receptors by ADAM Proteases.
  Journal
Dev Cell 35:537-552 (2015)
DOI:10.1016/j.devcel.2015.11.008
Related
pathway
pleu04010  MAPK signaling pathway
pleu04060  Cytokine-cytokine receptor interaction
pleu04310  Wnt signaling pathway
pleu04810  Regulation of actin cytoskeleton
KO pathway
ko04360   

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