KEGG   PATHWAY: pswi04310
Entry
pswi04310                   Pathway                                
Name
Wnt signaling pathway - Pseudoliparis swirei (Mariana hadal snailfish)
Description
Wnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, in many different species and organs. There are at least three different Wnt pathways: the canonical pathway, the planar cell polarity (PCP) pathway and the Wnt/Ca2+ pathway. In the canonical Wnt pathway, the major effect of Wnt ligand binding to its receptor is the stabilization of cytoplasmic beta-catenin through inhibition of the bea-catenin degradation complex. Beta-catenin is then free to enter the nucleus and activate Wnt-regulated genes through its interaction with TCF (T-cell factor) family transcription factors and concomitant recruitment of coactivators. Planar cell polarity (PCP) signaling leads to the activation of the small GTPases RHOA (RAS homologue gene-family member A) and RAC1, which activate the stress kinase JNK (Jun N-terminal kinase) and ROCK (RHO-associated coiled-coil-containing protein kinase 1) and leads to remodelling of the cytoskeleton and changes in cell adhesion and motility. WNT-Ca2+ signalling is mediated through G proteins and phospholipases and leads to transient increases in cytoplasmic free calcium that subsequently activate the kinase PKC (protein kinase C) and CAMKII (calcium calmodulin mediated kinase II) and the phosphatase calcineurin.
Class
Environmental Information Processing; Signal transduction
Pathway map
pswi04310  Wnt signaling pathway
pswi04310

Other DBs
GO: 0016055
Organism
Pseudoliparis swirei (Mariana hadal snailfish) [GN:pswi]
Gene
130187979  gbp; glycogen synthase kinase binding protein [KO:K03096]
130188027  [KO:K03115]
130188244  fzd2; frizzled-2 [KO:K02235]
130188305  rac1b; ras-related C3 botulinum toxin substrate 1b [KO:K04392]
130188307  prkacaa; protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a isoform X1 [KO:K04345] [EC:2.7.11.11]
130188474  axin1; axin-1 [KO:K02157]
130188608  [KO:K19662] [EC:2.7.11.13]
130188659  nlk1; nemo-like kinase, type 1 [KO:K04468] [EC:2.7.11.24]
130188720  crebbpb; CREB binding protein b isoform X1 [KO:K04498] [EC:2.3.1.48]
130188812  notum1a; palmitoleoyl-protein carboxylesterase notum1a [KO:K19882] [EC:3.1.1.98]
130188875  csnk1e; casein kinase I [KO:K08960] [EC:2.7.11.1]
130188916  wnt9b; LOW QUALITY PROTEIN: protein Wnt-9b [KO:K01064]
130188951  prkcab; protein kinase C alpha type isoform X1 [KO:K02677] [EC:2.7.11.13]
130189005  rbx1; E3 ubiquitin-protein ligase RBX1 [KO:K03868] [EC:2.3.2.32]
130189054  ccndx; cyclin Dx [KO:K10151]
130189122  axin2; axin-2 isoform X1 [KO:K04385]
130189219  ep300b; histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
130189470  crebbpa; CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
130189644  [KO:K02677] [EC:2.7.11.13]
130189916  ppp3r1b; calcineurin subunit B type 1b [KO:K06268]
130189990  rac2; ras-related C3 botulinum toxin substrate 2 isoform X1 [KO:K07860]
130190133  camk2d2; calcium/calmodulin-dependent protein kinase type II delta 2 chain isoform X1 [KO:K04515] [EC:2.7.11.17]
130190154  sfrp2; secreted frizzled-related protein 2 [KO:K02176]
130190175  notum1b; inactive palmitoleoyl-protein carboxylesterase notum1b [KO:K19882] [EC:3.1.1.98]
130190210  dkk2; dickkopf-related protein 2 [KO:K02165]
130190218  [KO:K04345] [EC:2.7.11.11]
130190241  [KO:K19662] [EC:2.7.11.13]
130190359  [KO:K02157]
130190406  cxxc4; CXXC-type zinc finger protein 4 [KO:K03344]
130190413  lef1; lymphoid enhancer-binding factor 1 isoform X1 [KO:K04492]
130190427  [KO:K04385]
130190540  dand5; DAN domain family member 5 [KO:K01645]
130190660  notum2; LOW QUALITY PROTEIN: carboxylesterase notum2 [KO:K19882] [EC:3.1.1.98]
130190958  [KO:K04510]
130191198  serpinf1; pigment epithelium-derived factor [KO:K19614]
130191892  ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
130192239  nfatc3a; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
130192243  csnk2b; casein kinase II subunit beta [KO:K03115]
130192280  ccnd1; G1/S-specific cyclin-D1 isoform X1 [KO:K04503]
130192365  lgr4; leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1 [KO:K04309]
130193035  csnk2a2a; casein kinase 2, alpha prime polypeptide a [KO:K03097] [EC:2.7.11.1]
130193185  [KO:K02329]
130193266  tle3b; transducin-like enhancer protein 3-B isoform X1 [KO:K04497]
130193273  [KO:K23605]
130193455  prkacba; protein kinase, cAMP-dependent, catalytic, beta a isoform X1 [KO:K04345] [EC:2.7.11.11]
130193810  [KO:K04446]
130193826  ryk; tyrosine-protein kinase RYK [KO:K05128] [EC:2.7.10.1]
130193827  apc2; adenomatous polyposis coli protein 2 [KO:K02085]
130194262  ror1; inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X1 [KO:K05122] [EC:2.7.10.1]
130194358  [KO:K02105]
130194435  [KO:K04508]
130194485  jun; transcription factor AP-1 [KO:K04448]
130194637  wnt2; protein Wnt-2 isoform X1 [KO:K00182]
130194667  lrp5; low-density lipoprotein receptor-related protein 5 isoform X1 [KO:K03068]
130194907  [KO:K04503]
130195012  tle3a; transducin-like enhancer protein 3-A [KO:K04497]
130195039  [KO:K04511]
130195103  smad3b; mothers against decapentaplegic homolog 3b [KO:K23605]
130195162  wnt7bb; protein Wnt-7b [KO:K00572]
130195190  ccnd2a; G1/S-specific cyclin-D2a [KO:K10151]
130195263  [KO:K17333]
130195508  siah1; E3 ubiquitin-protein ligase Siah1 isoform X1 [KO:K04506] [EC:2.3.2.27]
130195535  [KO:K03213]
130196222  [KO:K04497]
130196355  sfrp1a; secreted frizzled-related protein 1a [KO:K02166]
130196420  [KO:K04497]
130196503  fzd10; frizzled-10 [KO:K02842]
130196617  znrf3; E3 ubiquitin-protein ligase znrf3 isoform X1 [KO:K16273] [EC:2.3.2.27]
130196700  ppp3cca; LOW QUALITY PROTEIN: protein phosphatase 3, catalytic subunit, gamma isozyme, a [KO:K04348] [EC:3.1.3.16]
130196919  [KO:K04501]
130197066  tcf7l1b; transcription factor 7-like 1-B isoform X1 [KO:K04490]
130197173  [KO:K02165]
130197335  camk2b1; calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 isoform X1 [KO:K04515] [EC:2.7.11.17]
130197734  [KO:K04508]
130197739  nfatc4; nuclear factor of activated T-cells, cytoplasmic 4 [KO:K17334]
130197787  [KO:K25812]
130197836  chd8; chromodomain-helicase-DNA-binding protein 8 isoform X1 [KO:K04494] [EC:5.6.2.-]
130197907  [KO:K02375]
130197931  cacybp; calcyclin-binding protein [KO:K04507]
130197944  [KO:K04448]
130198028  wnt3a; LOW QUALITY PROTEIN: protein Wnt-3a [KO:K00312]
130198133  [KO:K02353]
130198180  prkacbb; LOW QUALITY PROTEIN: protein kinase, cAMP-dependent, catalytic, beta b [KO:K04345] [EC:2.7.11.11]
130198185  wnt9a; protein Wnt-9a [KO:K01064]
130198496  [KO:K23491]
130199094  [KO:K00181] [EC:2.3.1.250]
130199147  [KO:K04513]
130199157  ppardb; peroxisome proliferator-activated receptor delta b isoform X1 [KO:K04504]
130199269  rhoab; rho-related GTP-binding protein RhoA-B [KO:K04513]
130199324  prickle3; prickle-like protein 2 [KO:K04511]
130199356  [KO:K08399]
130199368  [KO:K00182]
130199381  [KO:K04513]
130199386  [KO:K04513]
130199457  dvl1a; segment polarity protein dishevelled homolog DVL-1 isoform X1 [KO:K02353]
130199482  [KO:K00181] [EC:2.3.1.250]
130199684  wnt10b; protein Wnt-10b [KO:K01357]
130199685  wnt1; protein Wnt-1 [KO:K03209]
130199750  wnt5a; protein Wnt-5a [KO:K00444]
130199799  nfatc2a; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332]
130199890  [KO:K04511]
130199915  ctnnbip1; beta-catenin-interacting protein 1 isoform X1 [KO:K04493]
130200015  [KO:K00572]
130200592  wnt5b; protein Wnt-5b isoform X1 [KO:K00444]
130200639  [KO:K10151]
130200655  gsk3ba; glycogen synthase kinase-3 beta isoform X1 [KO:K03083] [EC:2.7.11.26]
130200750  wnt16; protein Wnt-16 [KO:K01558]
130200839  [KO:K04511]
130200852  wnt7ba; protein Wnt-7b isoform X1 [KO:K00572]
130200857  lrp6; LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6 [KO:K03068]
130200863  [KO:K04308]
130201044  ccn4a; cellular communication network factor 4a [KO:K22471]
130201085  daam2; disheveled-associated activator of morphogenesis 2 isoform X1 [KO:K04512]
130201223  ccdc88c; protein Daple isoform X1 [KO:K25811]
130201430  plcb2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 [KO:K05858] [EC:3.1.4.11]
130201518  psen1; presenilin-1 [KO:K04505] [EC:3.4.23.-]
130201861  senp2; sentrin-specific protease 2 isoform X1 [KO:K03345] [EC:3.4.22.68]
130201873  rock2a; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
130202308  [KO:K04427] [EC:2.7.11.25]
130202379  [KO:K17388] [EC:2.7.11.1]
130202388  frzb; secreted frizzled-related protein 3 isoform X1 [KO:K25481]
130202411  map3k7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
130202465  [KO:K04512]
130202546  [KO:K04512]
130202601  [KO:K05858] [EC:3.1.4.11]
130202605  [KO:K05858] [EC:3.1.4.11]
130202748  tbl1x; F-box-like/WD repeat-containing protein TBL1X [KO:K04508]
130202845  rspo3; R-spondin-3 [KO:K23098]
130202863  fzd5; frizzled-5 [KO:K02375]
130203081  fzd3a; frizzled-3a isoform X1 [KO:K02329]
130203137  [KO:K04496] [EC:1.1.1.428]
130203157  [KO:K04515] [EC:2.7.11.17]
130203272  tcf7l2; transcription factor 7-like 2 isoform X1 [KO:K04491]
130203276  [KO:K04498] [EC:2.3.1.48]
130203292  wnt10a; protein Wnt-10a [KO:K01357]
130203361  mapk8b; mitogen-activated protein kinase 8 [KO:K04440] [EC:2.7.11.24]
130203394  rac3b; ras-related C3 botulinum toxin substrate 3b [KO:K07861]
130203563  wnt3; proto-oncogene Wnt-3 [KO:K00312]
130203598  [KO:K04392]
130203622  sost; sclerostin [KO:K16834]
130203659  cby1; protein chibby homolog 1 isoform X1 [KO:K23402]
130204288  [KO:K04510]
130204746  vangl1; vang-like protein 1 [KO:K04510]
130204974  smad4a; mothers against decapentaplegic homolog 4a isoform X1 [KO:K04501]
130205156  [KO:K04515] [EC:2.7.11.17]
130205358  mapk10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
130205398  ror2; tyrosine-protein kinase transmembrane receptor ROR2 [KO:K05123] [EC:2.7.10.1]
130205441  ppp3ccb; protein phosphatase 3, catalytic subunit, gamma isozyme, b [KO:K04348] [EC:3.1.3.16]
130205525  apc; adenomatous polyposis coli protein [KO:K02085]
130205718  tcf7l1a; transcription factor 7-like 1-A [KO:K04490]
130205890  fzd8a; frizzled-8a [KO:K02375]
130205957  [KO:K03347]
130205981  ctnnd2a; catenin delta-2 isoform X1 [KO:K23491]
130206120  bambia; BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [KO:K10162]
130206142  sox17; transcription factor SOX-17 [KO:K04495]
130206439  fzd1; frizzled-1 [KO:K02432]
130206496  myca; transcriptional regulator Myc-A [KO:K04377]
130206769  camk2g2; calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X1 [KO:K04515] [EC:2.7.11.17]
130206778  mapk8a; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
130206930  sirt1; NAD-dependent protein deacetylase sirtuin-1 [KO:K11411] [EC:2.3.1.286]
130206966  [KO:K02165]
130207005  [KO:K26471]
130207020  [KO:K04496] [EC:1.1.1.428]
130207171  wnt8b; protein Wnt-8b [KO:K00714]
130207272  [KO:K05858] [EC:3.1.4.11]
130207317  [KO:K06268]
130207526  sfrp5; secreted frizzled-related protein 5 [KO:K02222]
130207579  [KO:K02432]
130207725  wnt6b; protein Wnt-6 [KO:K00445]
130207902  rhoca; ras homolog family member Ca [KO:K04513]
130207997  ruvbl1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
130208098  csnk2a4; casein kinase II subunit alpha [KO:K03097] [EC:2.7.11.1]
130208146  ccnd3; G1/S-specific cyclin-D3 [KO:K10152]
130208155  [KO:K04513]
130208349  prickle2b; prickle-like protein 2b [KO:K04511]
130208406  wnt7aa; wingless-type MMTV integration site family, member 7Aa [KO:K00572]
130208668  [KO:K17332]
130208880  wnt4; protein Wnt-4a [KO:K00408]
130208911  [KO:K00182]
130209056  [KO:K25812]
130209106  smad10a; mothers against decapentaplegic homolog 4 isoform X1 [KO:K04501]
130209393  csnk1a1; casein kinase I isoform X1 [KO:K08957] [EC:2.7.11.1]
130209414  [KO:K04496] [EC:1.1.1.428]
130209426  mapk9; mitogen-activated protein kinase 9 [KO:K04440] [EC:2.7.11.24]
130209531  gpc4; glypican-4 [KO:K08110]
130209561  fbxw11a; F-box and WD repeat domain-containing 11-A isoform X1 [KO:K03362]
130209686  ctbp1; C-terminal-binding protein 1 isoform X1 [KO:K04496] [EC:1.1.1.428]
130209822  ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
130210086  [KO:K00714]
130210110  [KO:K00714]
130210158  [KO:K04515] [EC:2.7.11.17]
130210504  nlk2; serine/threonine-protein kinase NLK [KO:K04468] [EC:2.7.11.24]
130210566  fzd9b; frizzled-9b [KO:K02842]
130211081  tcf7; transcription factor 7 isoform X1 [KO:K02620]
130211097  fzd4; frizzled-4 [KO:K02354]
130211296  skp1; S-phase kinase-associated protein 1 [KO:K03094]
130211378  sfrp2l; secreted frizzled-related protein 2-like [KO:K02176]
130211573  [KO:K04510]
130211606  [KO:K04348] [EC:3.1.3.16]
130211644  plcb3; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1 [KO:K05858] [EC:3.1.4.11]
130211774  dvl2; segment polarity protein dishevelled homolog DVL-2 [KO:K02353]
130211870  tp53; cellular tumor antigen p53 isoform X1 [KO:K04451]
130211907  camk2d1; calcium/calmodulin-dependent protein kinase type II delta 1 chain isoform X1 [KO:K04515] [EC:2.7.11.17]
130212080  wnt11; protein Wnt-11 [KO:K01384]
130212253  [KO:K02165]
130212645  [KO:K02376]
130212793  invs; inversin [KO:K19626]
130212862  nkd2b; protein naked cuticle homolog 2-like [KO:K03213]
130212902  [KO:K03097] [EC:2.7.11.1]
130212979  rspo2; R-spondin-2 [KO:K23097]
130213123  prkcg; protein kinase C gamma type isoform X1 [KO:K19663] [EC:2.7.11.13]
130213187  [KO:K04446]
130213386  ctnnb1; catenin beta-1 [KO:K02105]
130213392  [KO:K15694] [EC:2.3.2.27]
130213393  rspo1; R-spondin-1 isoform X1 [KO:K19471]
130213472  wnt4b; wingless-type MMTV integration site family, member 4b [KO:K00408]
Compound
C00076  Calcium cation
Reference
  Authors
Hatsell S, Rowlands T, Hiremath M, Cowin P.
  Title
Beta-catenin and Tcfs in mammary development and cancer.
  Journal
J Mammary Gland Biol Neoplasia 8:145-58 (2003)
DOI:10.1023/A:1025944723047
Reference
  Authors
Yang Y.
  Title
Wnts and wing: Wnt signaling in vertebrate limb development and musculoskeletal morphogenesis.
  Journal
Birth Defects Res Part C Embryo Today 69:305-17 (2003)
DOI:10.1002/bdrc.10026
Reference
  Authors
Kalderon D.
  Title
Similarities between the Hedgehog and Wnt signaling pathways.
  Journal
Trends Cell Biol 12:523-31 (2002)
DOI:10.1016/S0962-8924(02)02388-7
Reference
  Authors
Nusse R.
  Title
Wnts and Hedgehogs: lipid-modified proteins and similarities in signaling mechanisms at the cell surface.
  Journal
Development 130:5297-305 (2003)
DOI:10.1242/dev.00821
Reference
  Authors
Jope RS, Johnson GV.
  Title
The glamour and gloom of glycogen synthase kinase-3.
  Journal
Trends Biochem Sci 29:95-102 (2004)
DOI:10.1016/j.tibs.2003.12.004
Reference
  Authors
Veeman MT, Axelrod JD, Moon RT.
  Title
A second canon. Functions and mechanisms of beta-catenin-independent Wnt signaling.
  Journal
Dev Cell 5:367-77 (2003)
DOI:10.1016/S1534-5807(03)00266-1
Reference
  Authors
Sun TQ, Lu B, Feng JJ, Reinhard C, Jan YN, Fantl WJ, Williams LT.
  Title
PAR-1 is a Dishevelled-associated kinase and a positive regulator of Wnt signalling.
  Journal
Nat Cell Biol 3:628-36 (2001)
DOI:10.1038/35083016
Reference
  Authors
Saito-Diaz K, Chen TW, Wang X, Thorne CA, Wallace HA, Page-McCaw A, Lee E
  Title
The way Wnt works: Components and mechanism.
  Journal
Growth Factors 31:1-31 (2013)
DOI:10.3109/08977194.2012.752737
Reference
  Authors
Carethers JM
  Title
Intersection of transforming growth factor-beta and Wnt signaling pathways in colorectal cancer and metastasis.
  Journal
Gastroenterology 137:33-6 (2009)
DOI:10.1053/j.gastro.2009.05.011
Reference
  Authors
Lin Z, Gao C, Ning Y, He X, Wu W, Chen YG
  Title
The pseudoreceptor BMP and activin membrane-bound inhibitor positively modulates Wnt/beta-catenin signaling.
  Journal
J Biol Chem 283:33053-8 (2008)
DOI:10.1074/jbc.M804039200
Reference
  Authors
Niehrs C
  Title
The complex world of WNT receptor signalling.
  Journal
Nat Rev Mol Cell Biol 13:767-79 (2012)
DOI:10.1038/nrm3470
Reference
  Authors
Abou Ziki MD, Mani A
  Title
Wnt signaling, a novel pathway regulating blood pressure? State of the art review.
  Journal
Atherosclerosis 262:171-178 (2017)
DOI:10.1016/j.atherosclerosis.2017.05.001
Reference
  Authors
He Y, Ki H, Kim H, Kim K
  Title
delta-Catenin interacts with LEF-1 and negatively regulates its transcriptional activity.
  Journal
Cell Biol Int 39:954-61 (2015)
DOI:10.1002/cbin.10465
Reference
  Authors
Esaki N, Enomoto A, Takagishi M, Mizutani Y, Iida T, Ushida K, Shiraki Y, Mii S, Takahashi M
  Title
The Daple-CK1epsilon complex regulates Dvl2 phosphorylation and canonical Wnt signaling.
  Journal
Biochem Biophys Res Commun 532:406-413 (2020)
DOI:10.1016/j.bbrc.2020.08.066
Reference
  Authors
Yiew NKH, Chatterjee TK, Tang YL, Pellenberg R, Stansfield BK, Bagi Z, Fulton DJ, Stepp DW, Chen W, Patel V, Kamath VM, Litwin SE, Hui DY, Rudich SM, Kim HW, Weintraub NL
  Title
A novel role for the Wnt inhibitor APCDD1 in adipocyte differentiation: Implications for diet-induced obesity.
  Journal
J Biol Chem 292:6312-6324 (2017)
DOI:10.1074/jbc.M116.758078
Related
pathway
pswi04010  MAPK signaling pathway
pswi04110  Cell cycle
pswi04115  p53 signaling pathway
pswi04120  Ubiquitin mediated proteolysis
pswi04350  TGF-beta signaling pathway
pswi04510  Focal adhesion
pswi04520  Adherens junction
KO pathway
ko04310   

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