GFIT result for srim |
[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
srim:CP984_20280 (311 a.a.) |
--  |
K01971  | ligD  | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
---|---|---|---|---|---|---|---|---|---|
> svl:Strvi_0339(312) | 304 | 70.4 | 1447 | 9 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> strz:OYE22_15380(?) | 300 | 71.3 | 1444 | 0 | -- | - | |||
> sant:QR300_21465(?) | 304 | 70.1 | 1441 | 0 | -- | - | |||
> sby:H7H31_15640(301) | 300 | 70.7 | 1439 | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> src:M271_24695(312) | 304 | 68.4 | 1420 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ssoi:I1A49_23885(314) | 304 | 67.4 | 1385 | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sauo:BV401_23550(314) | 304 | 66.4 | 1370 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sbat:G4Z16_03295(304) | 295 | 67.8 | 1358 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sdw:K7C20_04795(316) | 308 | 63.0 | 1329 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spla:CP981_05385(310) | 312 | 63.1 | 1313 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sho:SHJGH_7216(311) | 309 | 62.8 | 1308 | 12 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> shy:SHJG_7456(311) | 309 | 62.8 | 1308 | 12 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stro:STRMOE7_06835(317) | 306 | 62.7 | 1297 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> slc:SL103_13250(317) | 307 | 62.5 | 1296 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stud:STRTU_006221(328) | 311 | 63.0 | 1295 | 0 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> snig:HEK616_22950(333) | 315 | 62.2 | 1294 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sarg:HKX69_05445(?) | 309 | 62.5 | 1291 | 0 | -- | - | |||
> skg:KJK29_05425(?) | 310 | 62.9 | 1284 | 0 | -- | - | |||
> sgv:B1H19_08155(312) | 299 | 64.5 | 1283 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sauh:SU9_004015(316) | 310 | 61.0 | 1279 | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scoe:CP976_35435(309) | 310 | 62.9 | 1276 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sine:KI385_07975(312) | 308 | 60.7 | 1274 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stee:F3L20_13875(308) | 304 | 63.2 | 1273 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stsi:A4E84_33405(319) | 319 | 62.1 | 1271 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stui:GCM10017668_58580(309) | 310 | 62.9 | 1271 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stir:DDW44_29360(310) | 300 | 63.0 | 1269 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sjn:RI060_07205(?) | 310 | 62.3 | 1265 | 0 | -- | - | |||
> scyg:S1361_32365(311) | 308 | 61.4 | 1264 | 9 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> shaw:CEB94_34285(308) | 307 | 63.2 | 1264 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> srw:TUE45_07099(311) | 309 | 60.8 | 1262 | 29 | -- | K01971 | ligD | Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spav:Spa2297_27050(309) | 310 | 61.6 | 1257 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sspn:LXH13_31835(309) | 306 | 61.8 | 1253 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> seng:OJ254_22150(?) | 317 | 59.9 | 1249 | 0 | -- | - | |||
> saqu:EJC51_37990(309) | 307 | 59.9 | 1248 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sge:DWG14_01709(309) | 306 | 61.4 | 1243 | 6 | -- | K01971 | ligD | ligD_2; Multifunctional non-homologous end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sve:SVEN_0608(309) | 309 | 61.5 | 1241 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> svt:SVTN_30635(309) | 307 | 61.9 | 1240 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sfug:CNQ36_27290(308) | 306 | 61.4 | 1239 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> slv:SLIV_05935(319) | 312 | 60.6 | 1235 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sfic:EIZ62_05265(303) | 300 | 62.3 | 1234 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> strf:ASR50_29170(308) | 304 | 60.9 | 1233 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> strd:NI25_05905(304) | 306 | 60.8 | 1232 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spac:B1H29_06630(308) | 306 | 59.8 | 1227 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sinn:ABB07_06315(?) | 307 | 60.3 | 1224 | 0 | -- | - | |||
> samb:SAM23877_6202(312) | 314 | 59.2 | 1222 | 15 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sast:CD934_04465(308) | 309 | 60.5 | 1222 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sact:DMT42_31355(308) | 309 | 59.2 | 1221 | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sle:sle_12820(311) | 309 | 59.5 | 1220 | 7 | -- | K01971 | ligD | sle_12820; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> slf:JEQ17_10410(309) | 307 | 59.9 | 1220 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sgu:SGLAU_27360(308) | 308 | 59.7 | 1219 | 4 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sco:SCO6498(319) | 312 | 59.9 | 1218 | 10 | -- | K01971 | ligD | SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> srk:FGW37_32370(320) | 316 | 60.1 | 1215 | 16 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spra:CP972_29780(329) | 315 | 60.6 | 1214 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> svd:CP969_31145(315) | 314 | 60.2 | 1214 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> abry:NYE86_18065(305) | 297 | 62.3 | 1213 | 16 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scyn:N8I84_32380(?) | 309 | 59.9 | 1213 | 0 | -- | - | |||
> scya:EJ357_38895(313) | 311 | 57.6 | 1212 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sfeu:IM697_30100(312) | 312 | 59.3 | 1210 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sls:SLINC_6916(312) | 310 | 59.7 | 1208 | 8 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> snz:DC008_28495(311) | 310 | 59.0 | 1207 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> strt:A8713_26490(307) | 304 | 60.9 | 1207 | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> slia:HA039_02340(319) | 314 | 59.2 | 1199 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sdec:L3078_37645(308) | 308 | 59.1 | 1198 | 10 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sld:T261_1305(310) | 303 | 59.7 | 1197 | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scoa:QU709_06975(?) | 316 | 59.2 | 1196 | 0 | -- | - | |||
> snw:BBN63_03335(380) | 314 | 58.6 | 1195 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sroc:RGF97_03160(?) | 307 | 59.6 | 1195 | 0 | -- | - | |||
> scin:CP977_32815(305) | 297 | 60.6 | 1187 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scw:TU94_27575(303) | 304 | 58.6 | 1187 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scad:DN051_09500(304) | 306 | 58.8 | 1186 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> schf:IPT68_30465(308) | 308 | 58.1 | 1185 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scae:IHE65_07845(307) | 306 | 58.5 | 1183 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scx:AS200_10695(301) | 301 | 60.5 | 1181 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> kbu:Q4V64_45515(?) | 327 | 56.3 | 1180 | 0 | -- | - | |||
> smal:SMALA_3989(257) | 253 | 69.2 | 1178 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spri:SPRI_6912(306) | 302 | 58.3 | 1175 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sals:SLNWT_6707(304) | 305 | 59.0 | 1174 | 8 | -- | K01971 | ligD | DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scha:CP983_08080(308) | 304 | 58.9 | 1174 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> smao:CAG99_01250(309) | 300 | 59.0 | 1165 | 20 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sakb:K1J60_07630(324) | 313 | 57.5 | 1164 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> shau:K9S39_02110(?) | 298 | 60.4 | 1163 | 0 | -- | - | |||
> sdrz:NEH16_01735(294) | 292 | 59.9 | 1154 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> speu:CGZ69_02765(298) | 300 | 58.7 | 1151 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> srug:F0345_07590(315) | 315 | 56.8 | 1140 | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ssia:A7J05_06180(326) | 326 | 54.3 | 1134 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sfk:KY5_6844(313) | 314 | 54.1 | 1133 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sroi:IAG44_36300(297) | 295 | 56.9 | 1132 | 20 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sxn:IAG42_03225(313) | 310 | 56.5 | 1122 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rbar:AWN76_001560(303) | 299 | 56.5 | 1114 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> salw:CP975_30240(334) | 333 | 52.3 | 1113 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sdur:M4V62_08980(321) | 318 | 54.4 | 1110 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sky:D0C37_24225(313) | 309 | 56.3 | 1107 | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> salb:XNR_4488(313) | 309 | 56.6 | 1105 | 17 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> svio:HWN34_22675(313) | 309 | 56.6 | 1105 | 17 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sbro:GQF42_37975(310) | 305 | 54.4 | 1095 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scb:SCAB_17401(329) | 327 | 53.8 | 1093 | 24 | -- | K01971 | ligD | conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sgm:GCM10017557_13950(327) | 326 | 53.1 | 1091 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sspb:CP982_33160(310) | 309 | 53.7 | 1084 | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ksl:OG809_23005(?) | 302 | 53.6 | 1027 | 0 | -- | - | |||
> aey:CDG81_12940(303) | 301 | 54.2 | 1017 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] |