KEGG   PATHWAY: dre04060
Entry
dre04060                    Pathway                                
Name
Cytokine-cytokine receptor interaction - Danio rerio (zebrafish)
Description
Cytokines are soluble extracellular proteins or glycoproteins that are crucial intercellular regulators and mobilizers of cells engaged in innate as well as adaptive inflammatory host defenses, cell growth, differentiation, cell death, angiogenesis, and development and repair processes aimed at the restoration of homeostasis. Cytokines are released by various cells in the body, usually in response to an activating stimulus, and they induce responses through binding to specific receptors on the cell surface of target cells. Cytokines can be grouped by structure into different families and their receptors can likewise be grouped.
Class
Environmental Information Processing; Signaling molecules and interaction
Pathway map
dre04060  Cytokine-cytokine receptor interaction
dre04060

Organism
Danio rerio (zebrafish) [GN:dre]
Gene
795788  ccl25b; C-C motif chemokine 25b precursor [KO:K13072]
100333914  ccl25a; C-C motif chemokine 21-like [KO:K13072]
795469  ccl19b; C-C motif chemokine 19b precursor [KO:K05512]
797669  ccl39.6; monocyte chemotactic protein 1B-like [KO:K12499]
798811  ccl39.1; chemokine (C-C motif) ligand 39, duplicate 1 precursor [KO:K16595]
794616  ccl27b; C-C motif chemokine 27b precursor [KO:K05513]
30268  ccl27a; C-C motif chemokine 27a isoform 2 precursor [KO:K05513]
563152  ccl20b; C-C motif chemokine 20b precursor [KO:K14625]
101884175  C-C motif chemokine 20-like [KO:K14625]
100192217  ccl20a.3; C-C motif chemokine 20a.3 precursor [KO:K14625]
100002946  cxcl8a; permeability factor 2 isoform X1 [KO:K10030]
100003859  cxcl8b.3; interleukin-8b.3 precursor [KO:K10030]
100003911  cxcl19; C-X-C motif chemokine 19 precursor [KO:K10030]
101883994  growth-regulated alpha protein-like [KO:K05416]
798892  cxcl11.1; C-X-C motif chemokine 11-1 precursor [KO:K12672]
563964  cxcl11.8; chemokine (C-X-C motif) ligand 11, duplicate 8 precursor [KO:K12672]
101883537  C-X-C motif chemokine 11-6-like [KO:K12672]
101883679  cxcl11.7; C-X-C motif chemokine 11-6-like [KO:K12672]
101883535  cxcl11.5; C-X-C motif chemokine 11-6-like [KO:K12672]
101886937  cxcl13; C-X-C motif chemokine 13 [KO:K10032]
352944  cxcl12a; chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) precursor [KO:K10031]
799354  cxcl12b; chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) precursor [KO:K10031]
58151  cxcl14; C-X-C motif chemokine 14 precursor [KO:K10033]
100188894  il4; interleukin-4 precursor [KO:K05430]
654826  il15; interleukin-15 [KO:K05433]
100150203  il21; interleukin-21 precursor [KO:K05434]
100002479  epob; erythropoietin b precursor [KO:K05437]
100004455  epoa; erythropoietin isoform L2 precursor [KO:K05437]
407639  gh1; somatotropin precursor [KO:K05438]
572522  smtla; somatolactin alpha precursor [KO:K05438]
799612  prl2; prolactin 2 precursor [KO:K05439]
100189608  thpo; thrombopoietin precursor [KO:K06854]
100150233  lepa; leptin a precursor [KO:K05424]
564348  lepb; leptin b precursor [KO:K05424]
100885851  il6; interleukin-6 precursor [KO:K05405]
570404  il11a; uncharacterized protein il11a [KO:K05417]
100004358  zmp:0000001127; interleukin-12 subunit alpha-like [KO:K05406]
445410  il12a; interleukin-12 subunit alpha precursor [KO:K05406]
445373  il12ba; interleukin 12Ba precursor [KO:K05425]
567472  uncharacterized protein LOC567472 [KO:K22629]
100134974  ebi3; interleukin-27 subunit beta precursor [KO:K24476]
562247  clcf1; cardiotrophin-like cytokine factor 1 [KO:K05421]
555717  m17; IL-6 subfamily cytokine M17 precursor [KO:K05420]
553957  il10; interleukin-10 precursor [KO:K05443]
100004224  il19l; interleukin 19 like precursor [KO:K22667]
553964  il22; interleukin-22 [KO:K05445]
100126803  ifnphi3; interferon phi 3 precursor [KO:K05414]
360134  ifnphi1; interferon phi 1 precursor [KO:K05414]
405790  ifng1; interferon gamma 1 precursor [KO:K04687]
405770  il1b; interleukin-1 beta [KO:K04519]
553962  il17a/f3; interleukin 17a/f3 precursor [KO:K05494]
553959  il17a/f1; interleukin 17a/f1 precursor [KO:K05494]
553960  il17c; interleukin-17C precursor [KO:K05491]
553961  il17d; interleukin-17D precursor [KO:K05492]
100534674  il16; pro-interleukin-16 isoform X2 [KO:K22628]
560193  il34; interleukin-34 precursor [KO:K22633]
100004617  csf1a; macrophage colony-stimulating factor 1a precursor [KO:K05453]
405785  tnfa; tumor necrosis factor a (TNF superfamily, member 2) [KO:K03156]
554167  tnfb; tumor necrosis factor b (TNF superfamily, member 2) [KO:K05468]
798119  tnfsf14; tumor necrosis factor ligand superfamily member 14 [KO:K05477]
108190761  tumor necrosis factor ligand superfamily member 14-like [KO:K05477]
735295  faslg; tumor necrosis factor ligand superfamily member 6 [KO:K04389]
436866  tnfsf10; tumor necrosis factor ligand superfamily member 10 isoform 1 [KO:K04721]
798740  eda; ectodysplasin-A [KO:K05480]
58133  ngfb; nerve growth factor isoform 2 [KO:K02582]
30270  ngfa; neurotrophin-7 precursor [KO:K02582]
567542  tnfsf12; tumor necrosis factor ligand superfamily member 12 [KO:K05474]
793819  cd40lg; CD40 ligand [KO:K03161]
100149404  tnfsf13; tumor necrosis factor ligand superfamily member 13 [KO:K05475]
561268  tnfsf13b; tumor necrosis factor ligand superfamily member 13B [KO:K05476]
359834  tgfb1a; transforming growth factor, beta 1a precursor [KO:K13375]
563884  tgfb1b; transforming growth factor beta-1 [KO:K13375]
369194  tgfb2; transforming growth factor beta-2 proprotein precursor [KO:K13376]
559723  tgfb2l; transforming growth factor beta-2-like [KO:K13376]
369195  tgfb3; transforming growth factor beta-3 proprotein precursor [KO:K13377]
101886665  growth/differentiation factor 15 isoform X1 [KO:K05504]
563287  gdf2; growth/differentiation factor 2 preproprotein [KO:K05503]
562533  bmp10; bone morphogenetic protein 10 [KO:K22670]
570520  inha; inhibin alpha chain precursor [KO:K05500]
777717  bmp3; bone morphogenetic protein 3 [KO:K05496]
563003  gdf10a; growth/differentiation factor 10 [KO:K22674]
406247  gdf11; growth/differentiation factor 11 precursor [KO:K22679]
798441  mstnb; growth/differentiation factor 8 preproprotein [KO:K05497]
445816  mstna; myostatin a precursor [KO:K05497]
553816  inhbab; inhibin subunit beta Ab precursor [KO:K04667]
30072  inhbaa; inhibin subunit beta Aa [KO:K04667]
30275  inhbb; inhibin beta B chain precursor [KO:K22687]
100329520  inhibin beta B chain-like [KO:K22687]
100332902  inhibin beta B chain-like [KO:K22687]
101887111  inhibin beta B chain-like [KO:K22687]
30125  gdf3; protein DVR-1 precursor [KO:K22672]
799352  ndr1; nodal-related 1 precursor [KO:K04666]
338101  spaw; southpaw precursor [KO:K04666]
497643  gdf9; growth/differentiation factor 9 [KO:K22673]
493624  amh; muellerian-inhibiting factor precursor [KO:K04665]
100329171  bmp16; bone morphogenetic protein 16 precursor [KO:K21283]
30632  bmp2b; bone morphogenetic protein 2b precursor [KO:K21283]
140619  admp; anti-dorsalizing morphogenic protein precursor [KO:K21283]
30631  bmp2a; bone morphogenetic protein 2 precursor [KO:K21283]
30612  bmp4; bone morphogenetic protein 4 precursor [KO:K04662]
100334210  gdf5; growth/differentiation factor 5 [KO:K04664]
566470  gdf6a; growth/differentiation factor 6-A precursor [KO:K20012]
30180  gdf6b; growth/differentiation factor 6-B precursor [KO:K20012]
30642  gdf7; growth/differentiation factor 6-A [KO:K20013]
334183  bmp15; bone morphogenetic protein 15 precursor [KO:K05498]
394026  bmp5; bone morphogenetic protein 5 precursor [KO:K04663]
503761  bmp6; bone morphogenetic protein 6 precursor [KO:K16620]
557567  bmp7b; bone morphogenetic protein 7b [KO:K16621]
30584  bmp7a; bone morphogenetic protein 7a precursor [KO:K16621]
561963  bmp8a; bone morphogenetic protein 8A [KO:K16622]
553366  ccr9a; C-C chemokine receptor type 9a [KO:K04184]
100006078  ccr9b; C-C chemokine receptor type 9 isoform X1 [KO:K04184]
641390  ackr4b; atypical chemokine receptor 4b [KO:K04186]
100003167  ackr4a; atypical chemokine receptor 4 [KO:K04186]
565958  ccr7; C-C chemokine receptor type 7 precursor [KO:K04182]
100005081  si:ch211-207g17.3; C-C chemokine receptor type 5-like [KO:K04180]
100004988  si:ch211-207g17.2; C-C chemokine receptor type 5-like [KO:K04180]
100004625  ccr11.1; C-C chemokine receptor type 2 [KO:K04180]
558616  ccr6a; C-C chemokine receptor type 6a [KO:K04181]
336944  ccr6b; C-C chemokine receptor type 6 [KO:K04181]
796724  cxcr2; C-X-C chemokine receptor type 1-like [KO:K05050]
797181  C-X-C chemokine receptor type 1-like [KO:K05050]
654692  cxcr3.1; C-X-C chemokine receptor type 3.1 [KO:K04188]
791973  cxcr3.2; C-X-C chemokine receptor type 3-2 [KO:K04188]
799527  cxcr3.3; C-X-C chemokine receptor type 3.3 [KO:K04188]
100537421  cxcr5; C-X-C chemokine receptor type 5 [KO:K04190]
140747  cxcr4a; C-X-C chemokine receptor type 4a [KO:K04189]
114447  cxcr4b; C-X-C chemokine receptor type 4b [KO:K04189]
561050  ackr3b; atypical chemokine receptor 3b [KO:K04304]
100000764  ackr3a; atypical chemokine receptor 3a [KO:K04304]
793479  chemokine XC receptor 1-like [KO:K04193]
793148  chemokine XC receptor 1-like [KO:K04193]
553500  xcr1a.1; chemokine (C motif) receptor 1a, duplicate 1 [KO:K04193]
100329796  xcr1b.1; chemokine XC receptor 1-like [KO:K04193]
101883597  xcr1b.2; chemokine XC receptor 1-like [KO:K04193]
793920  il2rb; interleukin-2 receptor subunit beta precursor [KO:K05069]
796604  il2rga; interleukin 2 receptor, gamma a precursor [KO:K05070]
100144554  il2rgb; interleukin 2 receptor, gamma b precursor [KO:K05070]
563674  il4r.2; LOW QUALITY PROTEIN: uncharacterized protein il4r.2 [KO:K05071]
100134973  il7r; interleukin-7 receptor subunit alpha precursor [KO:K05072]
100134976  il21r.1; interleukin 21 receptor, tandem duplicate 1 precursor [KO:K05075]
100135062  csf2rb; cytokine receptor common subunit beta precursor [KO:K04738]
799475  il13ra1; interleukin-13 receptor subunit alpha-1 precursor [KO:K05076]
368326  il13ra2; interleukin-13 receptor subunit alpha-2 precursor [KO:K05077]
751109  epor; erythropoietin receptor precursor [KO:K05079]
100001424  ghra; growth hormone receptor a precursor [KO:K05080]
407651  prlra; prolactin receptor a precursor [KO:K05081]
445381  mpl; thrombopoietin receptor precursor [KO:K05082]
100134935  csf3r; granulocyte colony-stimulating factor receptor precursor [KO:K05061]
567241  lepr; leptin receptor precursor [KO:K05062]
100135755  il6r; interleukin-6 receptor subunit alpha precursor [KO:K05055]
100006778  il6st; interleukin-6 receptor subunit beta isoform 1 precursor [KO:K05060]
334010  il11ra; interleukin-11 receptor subunit alpha precursor [KO:K05056]
101883301  si:dkey-13m1.2; interleukin-12 receptor subunit beta-1 [KO:K05063]
100134971  il12rb2; interleukin-12 receptor subunit beta-2 [KO:K05064]
368438  cntfr; ciliary neurotrophic factor receptor subunit alpha precursor [KO:K05059]
541493  lifra; LIF receptor subunit alpha a precursor [KO:K05058]
565104  lifrb; LIF receptor subunit alpha b precursor [KO:K05058]
100144562  osmr; leukemia inhibitory factor receptor [KO:K05057]
797527  crfb4; cytokine receptor family member b4 precursor [KO:K05135]
619391  il10rb; interleukin-10 receptor subunit beta precursor [KO:K05135]
556728  il20ra; interleukin-20 receptor subunit alpha precursor [KO:K05136]
100174902  crfb16; cytokine receptor family member B16 precursor [KO:K05137]
777653  crfb2; cytokine receptor family member b2 precursor [KO:K05131]
100329124  ifngr1l; interferon gamma receptor 1-like precursor [KO:K05132]
794493  gdf10b; growth/differentiation factor 10b precursor [KO:K05132]
571368  ifngr1; interferon gamma receptor 1 precursor [KO:K05132]
799204  zmp:0000000936; interleukin-1 receptor type 1-like [KO:K04386]
799279  interleukin-1 receptor type 1-like [KO:K04386]
100331351  il1rap; interleukin-1 receptor accessory protein [KO:K04723]
407649  il1rl1; interleukin-1 receptor-like 1 [KO:K05171]
561494  il17ra1a; interleukin 17 receptor A1a precursor [KO:K05164]
100005924  interleukin-17 receptor A-like [KO:K05164]
100538314  il17rc; interleukin-17 receptor C [KO:K05166]
101886252  interleukin-17 receptor B-like [KO:K05165]
110440027  interleukin-17 receptor E-like [KO:K05168]
799982  cd4-1; CD4-1 molecule precursor [KO:K06454]
64274  csf1ra; macrophage colony-stimulating factor 1 receptor precursor [KO:K05090] [EC:2.7.10.1]
568405  csf1rb; macrophage colony-stimulating factor 1 receptor 1 [KO:K05090] [EC:2.7.10.1]
406471  tnfrsf1a; tumor necrosis factor receptor superfamily member 1A precursor [KO:K03158]
100037357  tnfrsf1b; tumor necrosis factor receptor superfamily member 1B precursor [KO:K05141]
798191  tumor necrosis factor receptor superfamily member 14-like [KO:K05152]
791704  zgc:153759; uncharacterized protein LOC791704 precursor [KO:K05152]
751714  zgc:153631; uncharacterized protein LOC751714 [KO:K05152]
768248  fas; tumor necrosis factor receptor superfamily member 6 [KO:K04390]
373093  hdr; hematopoietic death receptor precursor [KO:K04722]
564874  tnfrsf21; tumor necrosis factor receptor superfamily member 21 precursor [KO:K05157]
796370  edar; tumor necrosis factor receptor superfamily member EDAR precursor [KO:K05162]
100006301  si:dkey-204l11.1; tumor necrosis factor receptor superfamily member 27 [KO:K05163]
572204  nradd; tumor necrosis factor receptor superfamily member 16 [KO:K02583]
564338  ngfrb; nerve growth factor receptor b precursor [KO:K02583]
100535003  ngfra; tumor necrosis factor receptor superfamily member 16 isoform X1 [KO:K02583]
100333821  tnfrsf11a; tumor necrosis factor receptor superfamily member 11A isoform X1 [KO:K05147]
110438942  uncharacterized protein LOC110438942 [KO:K05149]
101887143  cd27; tumor necrosis factor receptor superfamily member 4 [KO:K05144]
100270764  cd40; tumor necrosis factor receptor superfamily member 5 precursor [KO:K03160]
678622  tnfrsf9a; tumor necrosis factor receptor superfamily member 9a precursor [KO:K05146]
100151629  tnfrsf9b; tumor necrosis factor receptor superfamily member 9b precursor [KO:K05146]
571217  tnfrsf18; tumor necrosis factor receptor superfamily member 18 precursor [KO:K05154]
103911910  uncharacterized protein LOC103911910 [KO:K05153]
103911891  tnfrsf13b; tumor necrosis factor receptor superfamily member 13B [KO:K05150]
559725  tnfrsf19; tumor necrosis factor receptor superfamily member 19 precursor [KO:K05155]
404605  relt; tumor necrosis factor receptor superfamily member 19L precursor [KO:K05156]
678542  rell2; RELT-like protein 2 [KO:K26541]
799556  rell1; RELT-like protein 1 [KO:K26541]
560578  tgfbr1a; TGF-beta receptor type-1a precursor [KO:K04674] [EC:2.7.11.30]
792928  tgfbr1b; TGF-beta receptor type-1b precursor [KO:K04674] [EC:2.7.11.30]
30739  tgfbr2b; TGF-beta receptor type-2 precursor [KO:K04388] [EC:2.7.11.30]
560446  si:dkey-101k6.5; TGF-beta receptor type-2 [KO:K04388] [EC:2.7.11.30]
553359  acvr2aa; activin receptor type-2A precursor [KO:K04670] [EC:2.7.11.30]
100331014  acvr2ab; activin receptor type-2A-like isoform X2 [KO:K04670] [EC:2.7.11.30]
555655  bmpr2b; bone morphogenetic protein receptor type-2 precursor [KO:K04671] [EC:2.7.11.30]
562822  bmpr2a; bone morphogenetic protein receptor type-2a precursor [KO:K04671] [EC:2.7.11.30]
30457  acvr2ba; activin receptor type-2B precursor [KO:K13596] [EC:2.7.11.30]
100331938  activin receptor type-2B-like [KO:K13596] [EC:2.7.11.30]
30183  acvr1ba; activin A receptor type 1Ba precursor [KO:K13567] [EC:2.7.11.30]
559222  acvr1bb; activin receptor type-1B [KO:K13567] [EC:2.7.11.30]
100331105  acvr1c; activin receptor type-1C [KO:K13568] [EC:2.7.11.30]
30615  acvr1l; activin receptor type-1 precursor [KO:K04675] [EC:2.7.11.30]
447846  bmpr1ab; bone morphogenetic protein receptor, type IAb precursor [KO:K04673] [EC:2.7.11.30]
58145  bmpr1aa; bone morphogenetic protein receptor, type IAa precursor [KO:K04673] [EC:2.7.11.30]
100149664  bmpr1bb; bone morphogenetic protein receptor, type IBb isoform 2 precursor [KO:K13578] [EC:2.7.11.30]
30742  bmpr1ba; bone morphogenetic protein receptor type-1B precursor [KO:K13578] [EC:2.7.11.30]
Reference
  Authors
Turner MD, Nedjai B, Hurst T, Pennington DJ
  Title
Cytokines and chemokines: At the crossroads of cell signalling and inflammatory disease.
  Journal
Biochim Biophys Acta 1843:2563-2582 (2014)
DOI:10.1016/j.bbamcr.2014.05.014
Reference
  Authors
Brocker C, Thompson D, Matsumoto A, Nebert DW, Vasiliou V
  Title
Evolutionary divergence and functions of the human interleukin (IL) gene family.
  Journal
Hum Genomics 5:30-55 (2010)
DOI:10.1186/1479-7364-5-1-30
Reference
  Authors
Akdis M, Aab A, Altunbulakli C, Azkur K, Costa RA, Crameri R, Duan S, Eiwegger T, Eljaszewicz A, Ferstl R, Frei R, Garbani M, Globinska A, Hess L, Huitema C, Kubo T, Komlosi Z, Konieczna P, Kovacs N, Kucuksezer UC, Meyer N, Morita H, Olzhausen J, O'Mahony L, Pezer M, Prati M, Rebane A, Rhyner C, Rinaldi A, Sokolowska M, Stanic B, Sugita K, Treis A, van de Veen W, Wanke K, Wawrzyniak M, Wawrzyniak P, Wirz OF, Zakzuk JS, Akdis CA
  Title
Interleukins (from IL-1 to IL-38), interferons, transforming growth factor beta, and TNF-alpha: Receptors, functions, and roles in diseases.
  Journal
J Allergy Clin Immunol 138:984-1010 (2016)
DOI:10.1016/j.jaci.2016.06.033
Reference
  Authors
Boulanger MJ, Garcia KC
  Title
Shared cytokine signaling receptors: structural insights from the gp130 system.
  Journal
Adv Protein Chem 68:107-46 (2004)
DOI:10.1016/S0065-3233(04)68004-1
Reference
  Authors
Allan SM, Tyrrell PJ, Rothwell NJ
  Title
Interleukin-1 and neuronal injury.
  Journal
Nat Rev Immunol 5:629-40 (2005)
DOI:10.1038/nri1664
Reference
  Authors
Lopetuso LR, Chowdhry S, Pizarro TT
  Title
Opposing Functions of Classic and Novel IL-1 Family Members in Gut Health and Disease.
  Journal
Front Immunol 4:181 (2013)
DOI:10.3389/fimmu.2013.00181
Reference
  Authors
Iwakura Y, Ishigame H, Saijo S, Nakae S
  Title
Functional specialization of interleukin-17 family members.
  Journal
Immunity 34:149-62 (2011)
DOI:10.1016/j.immuni.2011.02.012
Reference
  Authors
Fischer P, Hilfiker-Kleiner D
  Title
Survival pathways in hypertrophy and heart failure: the gp130-STAT3 axis.
  Journal
Basic Res Cardiol 102:279-97 (2007)
DOI:10.1007/s00395-007-0658-z
Reference
  Authors
Richards CD
  Title
The enigmatic cytokine oncostatin m and roles in disease.
  Journal
ISRN Inflamm 2013:512103 (2013)
DOI:10.1155/2013/512103
Reference
  Authors
Zhang Q, Putheti P, Zhou Q, Liu Q, Gao W
  Title
Structures and biological functions of IL-31 and IL-31 receptors.
  Journal
Cytokine Growth Factor Rev 19:347-56 (2008)
DOI:10.1016/j.cytogfr.2008.08.003
Reference
  Authors
Meenhuis A, Verwijmeren C, Roovers O, Touw IP
  Title
The deubiquitinating enzyme DUB2A enhances CSF3 signalling by attenuating lysosomal routing of the CSF3 receptor.
  Journal
Biochem J 434:343-51 (2011)
DOI:10.1042/BJ20101628
Reference
  Authors
de Weerd NA, Nguyen T
  Title
The interferons and their receptors--distribution and regulation.
  Journal
Immunol Cell Biol 90:483-91 (2012)
DOI:10.1038/icb.2012.9
Reference
  Authors
Aggarwal BB
  Title
Signalling pathways of the TNF superfamily: a double-edged sword.
  Journal
Nat Rev Immunol 3:745-56 (2003)
DOI:10.1038/nri1184
Reference
  Authors
Ashkenazi A
  Title
Targeting death and decoy receptors of the tumour-necrosis factor superfamily.
  Journal
Nat Rev Cancer 2:420-30 (2002)
DOI:10.1038/nrc821
Reference
  Authors
Seeger P, Musso T, Sozzani S
  Title
The TGF-beta superfamily in dendritic cell biology.
  Journal
Cytokine Growth Factor Rev 26:647-57 (2015)
DOI:10.1016/j.cytogfr.2015.06.002
Reference
  Authors
Wakefield LM, Hill CS
  Title
Beyond TGFbeta: roles of other TGFbeta superfamily members in cancer.
  Journal
Nat Rev Cancer 13:328-41 (2013)
DOI:10.1038/nrc3500
Reference
  Authors
Mueller TD, Nickel J
  Title
Promiscuity and specificity in BMP receptor activation.
  Journal
FEBS Lett 586:1846-59 (2012)
DOI:10.1016/j.febslet.2012.02.043
KO pathway
ko04060   
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