KEGG   PATHWAY: schu04512
Entry
schu04512                   Pathway                                
Name
ECM-receptor interaction - Siniperca chuatsi (mandarin fish)
Description
The extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell and tissue structure and function. Specific interactions between cells and the ECM are mediated by transmembrane molecules, mainly integrins and perhaps also proteoglycans, CD36, or other cell-surface-associated components. These interactions lead to a direct or indirect control of cellular activities such as adhesion, migration, differentiation, proliferation, and apoptosis. In addition, integrins function as mechanoreceptors and provide a force-transmitting physical link between the ECM and the cytoskeleton. Integrins are a family of glycosylated, heterodimeric transmembrane adhesion receptors that consist of noncovalently bound alpha- and beta-subunits.
Class
Environmental Information Processing; Signaling molecules and interaction
Pathway map
schu04512  ECM-receptor interaction
schu04512

Other DBs
GO: 0005201
Organism
Siniperca chuatsi (mandarin fish) [GN:schu]
Gene
122861455  [KO:K16857]
122862938  lama2; laminin subunit alpha-2 isoform X1 [KO:K05637]
122863142  thbs1b; thrombospondin-1 [KO:K16857]
122863248  col2a1b; collagen, type II, alpha 1b isoform X1 [KO:K19719]
122863273  lama4; laminin subunit alpha-4 [KO:K06241]
122863449  [KO:K16338]
122864000  itgb8; integrin beta-8 [KO:K06591]
122864026  col9a2; collagen alpha-2(IX) chain isoform X1 [KO:K08131]
122864481  [KO:K06252]
122864504  [KO:K08131]
122864951  col1a2; collagen alpha-2(I) chain isoform X1 [KO:K06236]
122864986  [KO:K06258]
122865532  thbs4b; thrombospondin-4-B [KO:K04659]
122865554  itga1; integrin alpha-1 isoform X1 [KO:K06480]
122865582  tnca; tenascin isoform X1 [KO:K06252]
122865752  [KO:K06258]
122866155  lamc3; laminin subunit gamma-3 [KO:K06247]
122866600  lama1; laminin subunit alpha-1 isoform X1 [KO:K05637]
122866790  itgb1a; integrin beta-1a isoform X1 [KO:K05719]
122867154  col1a1b; collagen, type I, alpha 1b [KO:K06236]
122867200  [KO:K06493]
122867644  [KO:K04659]
122867923  itgb4; integrin beta-4 isoform X1 [KO:K06525]
122868106  itga3b; integrin alpha-3b isoform X1 [KO:K06482]
122868221  chad; chondroadherin [KO:K06248]
122868580  col1a1a; collagen, type I, alpha 1a isoform X1 [KO:K06236]
122868677  itgb3a; integrin beta-3a [KO:K06493]
122869156  [KO:K06482]
122869338  itga2b; integrin alpha-IIb [KO:K06476]
122869684  sdc4; syndecan-4 isoform X1 [KO:K16338]
122869975  col4a6; collagen alpha-6(IV) chain isoform X1 [KO:K06237]
122869976  col4a5; collagen alpha-5(IV) chain isoform X1 [KO:K06237]
122870123  [KO:K06824]
122870715  frem1a; LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1a [KO:K23380]
122871270  lamb1b; laminin subunit beta-1b isoform X1 [KO:K05636]
122871391  cd36; platelet glycoprotein 4 [KO:K06259]
122873178  col9a1a; collagen, type IX, alpha 1a [KO:K08131]
122873374  itga11a; integrin alpha-11a isoform X1 [KO:K06587]
122873447  npnta; nephronectin a isoform X1 [KO:K06824]
122874570  itga11b; integrin alpha-11 isoform X1 [KO:K06587]
122874655  fn1b; fibronectin 1b isoform X1 [KO:K05717]
122874852  cd44b; CD44 antigen [KO:K06256]
122874974  reln; reelin isoform X1 [KO:K06249] [EC:3.4.21.-]
122875011  vwf; von Willebrand factor isoform X1 [KO:K03900]
122875014  lamb1a; laminin subunit beta-1a isoform X1 [KO:K05636]
122875310  lamb4; laminin subunit beta-4 [KO:K06245]
122875336  sv2; synaptic vesicle glycoprotein 2C isoform X1 [KO:K06258]
122875687  gp1bb; platelet glycoprotein Ib beta chain [KO:K06262]
122875761  fras1; extracellular matrix protein FRAS1 isoform X1 [KO:K23379]
122876284  tncb; tenascin isoform X1 [KO:K06252]
122876375  itga2.2; integrin alpha-2 [KO:K06481]
122876415  thbs4a; thrombospondin-4a [KO:K04659]
122876565  sv2ca; synaptic vesicle glycoprotein 2Ca [KO:K06258]
122876996  itgb6; integrin beta-6 [KO:K06589]
122877431  frem1b; FRAS1-related extracellular matrix protein 1b isoform X1 [KO:K23380]
122877911  [KO:K06260]
122878156  [KO:K04659]
122878594  frem2b; FRAS1-related extracellular matrix protein 2b isoform X1 [KO:K23380]
122879247  col4a3; collagen alpha-5(IV) chain [KO:K06237]
122879249  col4a4; collagen alpha-4(IV) chain [KO:K06237]
122879430  vtna; vitronectin a [KO:K06251]
122879868  sv2ba; synaptic vesicle glycoprotein 2Ba [KO:K06258]
122880878  hmmr; hyaluronan mediated motility receptor [KO:K06267]
122880881  [KO:K06485]
122881071  thbs3a; thrombospondin-3a [KO:K04659]
122881113  [KO:K06238]
122881114  [KO:K06238]
122881217  sv2a; synaptic vesicle glycoprotein 2A [KO:K06258]
122881279  itga10; integrin alpha-10 [KO:K06586]
122881323  itga8; integrin alpha-8 [KO:K06584]
122881403  tnxba; tenascin isoform X1 [KO:K06252]
122882489  agrn; agrin isoform X1 [KO:K06254]
122882608  lama5; LOW QUALITY PROTEIN: laminin subunit alpha-5 [KO:K06240]
122882844  col2a1a; collagen, type II, alpha 1a isoform X1 [KO:K19719]
122883124  lamb2; laminin subunit beta-2 isoform X1 [KO:K06243]
122883160  lamb2l; laminin subunit beta-2 isoform X1 [KO:K06243]
122883212  itga7; integrin alpha-7 isoform X1 [KO:K06583]
122883316  [KO:K06265]
122883574  gp9; glycoprotein IX (platelet) [KO:K06263]
122883591  col9a3; collagen alpha-3(IX) chain [KO:K08131]
122883630  lamb3; laminin subunit beta-3 isoform X1 [KO:K06244]
122883672  itga5; integrin alpha-5 [KO:K06484]
122883689  hspg2; basement membrane-specific heparan sulfate proteoglycan core protein isoform X1 [KO:K06255]
122883982  itga9; integrin alpha-9 [KO:K06585]
122884583  thbs2a; thrombospondin-2 isoform X1 [KO:K04659]
122884683  col9a1b; collagen, type IX, alpha 1b [KO:K08131]
122885133  itgav; integrin alpha-V [KO:K06487]
122885458  col4a2; collagen alpha-2(IV) chain isoform X1 [KO:K06237]
122885459  col4a1; collagen alpha-1(IV) chain [KO:K06237]
122885510  itgb5; integrin beta-5 [KO:K06588]
122885529  itga6a; integrin alpha-6 isoform X1 [KO:K06485]
122885588  fn1a; fibronectin 1a [KO:K05717]
122885668  itga4; integrin alpha-4 [KO:K06483]
122885913  col6a3; LOW QUALITY PROTEIN: uncharacterized protein col6a3 [KO:K06238]
122886132  [KO:K06238]
122886328  [KO:K06485]
122886354  col6a1; collagen alpha-1(VI) chain [KO:K06238]
122886630  tnn; tenascin-N isoform X1 [KO:K06252]
122886692  [KO:K06237]
122886693  [KO:K06237]
122886764  col6a2; collagen alpha-2(VI) chain isoform X1 [KO:K06238]
122886829  lamc2; laminin subunit gamma-2 [KO:K06246]
122886947  lamc1; laminin subunit gamma-1 [KO:K05635]
122886970  dag1; dystroglycan [KO:K06265]
122887084  tnr; tenascin-R isoform X1 [KO:K06252]
122887132  [KO:K06240]
122887601  [KO:K05719]
122888504  [KO:K06484]
122888524  [KO:K23380]
122888576  vtnb; vitronectin b [KO:K06251]
Compound
G10505  Hyaluronic acid
Reference
  Authors
van der Flier A, Sonnenberg A.
  Title
Function and interactions of integrins.
  Journal
Cell Tissue Res 305:285-98 (2001)
DOI:10.1007/s004410100417
Reference
  Authors
Reddy KV, Mangale SS.
  Title
Integrin receptors: the dynamic modulators of endometrial function.
  Journal
Tissue Cell 35:260-73 (2003)
DOI:10.1016/S0040-8166(03)00039-9
Reference
  Authors
Milner R, Campbell IL.
  Title
The integrin family of cell adhesion molecules has multiple functions within the CNS.
  Journal
J Neurosci Res 69:286-91 (2002)
DOI:10.1002/jnr.10321
Reference
  Authors
Cichy J, Pure E.
  Title
The liberation of CD44.
  Journal
J Cell Biol 161:839-43 (2003)
DOI:10.1083/jcb.200302098
Reference
PMID:7698997
  Authors
Elenius K, Jalkanen M.
  Title
Function of the syndecans--a family of cell surface proteoglycans.
  Journal
J Cell Sci 107 ( Pt 11):2975-82 (1994)
Reference
  Authors
Son YJ, Scranton TW, Sunderland WJ, Baek SJ, Miner JH, Sanes JR, Carlson SS.
  Title
The synaptic vesicle protein SV2 is complexed with an alpha5-containing laminin on the nerve terminal surface.
  Journal
J Biol Chem 275:451-60 (2000)
DOI:10.1074/jbc.275.1.451
Reference
  Authors
Sid B, Sartelet H, Bellon G, El Btaouri H, Rath G, Delorme N, Haye B, Martiny L.
  Title
Thrombospondin 1: a multifunctional protein implicated in the regulation of tumor growth.
  Journal
Crit Rev Oncol Hematol 49:245-58 (2004)
DOI:10.1016/j.critrevonc.2003.09.009
Reference
  Authors
Canobbio I, Balduini C, Torti M.
  Title
Signalling through the platelet glycoprotein Ib-V-IX complex.
  Journal
Cell Signal 16:1329-44 (2004)
DOI:10.1016/j.cellsig.2004.05.008
Reference
  Authors
Nieswandt B, Brakebusch C, Bergmeier W, Schulte V, Bouvard D, Mokhtari-Nejad R, Lindhout T, Heemskerk JW, Zirngibl H, Fassler R.
  Title
Glycoprotein VI but not alpha2beta1 integrin is essential for platelet interaction with collagen.
  Journal
EMBO J 20:2120-30 (2001)
DOI:10.1093/emboj/20.9.2120
Reference
  Authors
Martin PT.
  Title
Dystroglycan glycosylation and its role in matrix binding in skeletal muscle.
  Journal
Glycobiology 13:55R-66R (2003)
DOI:10.1093/glycob/cwg076
Reference
  Authors
Toole BP.
  Title
Hyaluronan: from extracellular glue to pericellular cue.
  Journal
Nat Rev Cancer 4:528-39 (2004)
DOI:10.1038/nrc1391
Reference
  Authors
Bosman FT, Stamenkovic I.
  Title
Functional structure and composition of the extracellular matrix.
  Journal
J Pathol 200:423-8 (2003)
DOI:10.1002/path.1437
Reference
  Authors
van der Ven AT, Vivante A, Hildebrandt F
  Title
Novel Insights into the Pathogenesis of Monogenic Congenital Anomalies of the Kidney and Urinary Tract.
  Journal
J Am Soc Nephrol 29:36-50 (2018)
DOI:10.1681/ASN.2017050561
Related
pathway
schu04510  Focal adhesion
KO pathway
ko04512   

DBGET integrated database retrieval system