Entry
Name
Endocytosis - Sarcophilus harrisii (Tasmanian devil)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Sarcophilus harrisii (Tasmanian devil) [GN:
shr ]
Gene
100913302 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
100913535 SAHAI-01; class I histocompatibility antigen, Gogo-OKO alpha chain-like precursor [KO:K06751 ]
100913669 WIPF1; WAS/WASL-interacting protein family member 1 isoform X1 [KO:K19475 ]
100914011 EPS15L1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
100914138 VPS37D; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
100914739 VPS45; vacuolar protein sorting-associated protein 45 isoform X1 [KO:K12479 ]
100914956 SMAD2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
100915284 CHMP4A; charged multivesicular body protein 4a isoform X1 [KO:K12194 ]
100915966 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 [KO:K12493 ]
100916468 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
100916663 AGAP3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
100916870 ARFGEF1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
100916915 VPS25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
100917126 RAB11FIP1; rab11 family-interacting protein 1 isoform X3 [KO:K12484 ]
100917215 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
100917238 BIN1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
100917391 ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
100917472 CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053 ]
100917718 GBF1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X5 [KO:K18443 ]
100917975 VPS26A; vacuolar protein sorting-associated protein 26A isoform X1 [KO:K18466 ]
100918370 CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
100918628 SMAP2; stromal membrane-associated protein 2 isoform X1 [KO:K12486 ]
100918672 RAB11FIP2; rab11 family-interacting protein 2 isoform X2 [KO:K12484 ]
100919556 RUFY1; RUN and FYVE domain-containing protein 1 isoform X4 [KO:K12482 ]
100919606 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
100919863 SAHAI-12; HLA class I histocompatibility antigen, A-69 alpha chain-like [KO:K06751 ]
100920329 RUFY2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
100920748 WIPF3; LOW QUALITY PROTEIN: WAS/WASL-interacting protein family member 3 [KO:K19475 ]
100920938 IQSEC2; LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 2 [KO:K12495 ]
100921038 VPS4A; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
100921182 IQSEC3; IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
100921388 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
100921577 VPS29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
100921689 ARPC2; actin-related protein 2/3 complex subunit 2 isoform X2 [KO:K05758 ]
100921854 ASAP3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12488 ]
100922002 VPS35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
100922101 ARPC1A; actin-related protein 2/3 complex subunit 1A isoform X1 [KO:K05757 ]
100922408 TSG101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
100922878 ASAP1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X6 [KO:K12488 ]
100923200 PSD; PH and SEC7 domain-containing protein 1 isoform X1 [KO:K12494 ]
100923508 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12489 ]
100923617 RAB11FIP4; rab11 family-interacting protein 4 isoform X1 [KO:K12485 ]
100924045 VTA1; vacuolar protein sorting-associated protein VTA1 homolog [KO:K12199 ]
100924661 ZFYVE9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
100924903 STAM2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
100925416 IQSEC1; IQ motif and SEC7 domain-containing protein 1 isoform X6 [KO:K12495 ]
100925480 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
100925727 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
100926429 VPS37C; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
100926656 EPS15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
100926665 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
100926742 ARAP1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
100926759 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
100926926 IGF2R; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
100927657 PARD6G; partitioning defective 6 homolog gamma isoform X1 [KO:K06093 ]
100927988 ASAP2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X3 [KO:K12488 ]
100928357 RAB11FIP3; rab11 family-interacting protein 3 isoform X2 [KO:K12485 ]
100928373 CHMP2B; charged multivesicular body protein 2b isoform X1 [KO:K12192 ]
100928917 VPS37A; vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
100928929 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
100929376 RAB11FIP5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
100929653 VPS36; vacuolar protein-sorting-associated protein 36 isoform X1 [KO:K12190 ]
100929781 IL2RG; cytokine receptor common subunit gamma isoform X2 [KO:K05070 ]
100931305 ACAP3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
100931466 VPS37B; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
100931744 CAPZB; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
100932204 STAM; signal transducing adapter molecule 1 isoform X1 [KO:K04705 ]
100932388 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X5 [KO:K17848 ]
100932601 SH3KBP1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
100932668 PSD2; PH and SEC7 domain-containing protein 2 isoform X1 [KO:K12494 ]
100934252 LDLRAP1; low density lipoprotein receptor adapter protein 1 isoform X1 [KO:K12474 ]
100934318 PSD3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
100934540 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
100934931 VPS4B; vacuolar protein sorting-associated protein 4B isoform X2 [KO:K12196 ]
100935123 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
100935197 RAB8A; LOW QUALITY PROTEIN: ras-related protein Rab-8A [KO:K07901 ]
105750698 IL2RA; interleukin-2 receptor subunit alpha isoform X1 [KO:K05068 ]
116420723 VPS28; vacuolar protein sorting-associated protein 28 homolog isoform X1 [KO:K12184 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
shr04060 Cytokine-cytokine receptor interaction
shr04070 Phosphatidylinositol signaling system
shr04130 SNARE interactions in vesicular transport
KO pathway