KEGG   PATHWAY: ko04668
Entry
ko04668                     Pathway                                
Name
TNF signaling pathway
Description
Tumor necrosis factor (TNF), as a critical cytokine, can induce a wide range of intracellular signal pathways including apoptosis and cell survival as well as inflammation and immunity. Activated TNF is assembled to a homotrimer and binds to its receptors (TNFR1, TNFR2) resulting in the trimerization of TNFR1 or TNFR2. TNFR1 is expressed by nearly all cells and is the major receptor for TNF (also called TNF-alpha). In contrast, TNFR2 is expressed in limited cells such as CD4 and CD8 T lymphocytes, endothelial cells, microglia, oligodendrocytes, neuron subtypes, cardiac myocytes, thymocytes and human mesenchymal stem cells. It is the receptor for both TNF and LTA (also called TNF-beta). Upon binding of the ligand, TNFR mediates the association of some adaptor proteins such as TRADD or TRAF2, which in turn initiate recruitment of signal transducers. TNFR1 signaling induces activation of many genes, primarily controlled by two distinct pathways, NF-kappa B pathway and the MAPK cascade, or apoptosis and necroptosis. TNFR2 signaling activates NF-kappa B pathway including PI3K-dependent NF-kappa B pathway and JNK pathway leading to survival.
Class
Environmental Information Processing; Signal transduction
Pathway map
ko04668  TNF signaling pathway
ko04668

Other DBs
GO: 0033209
Orthology
K00922  PIK3CA_B_D; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha/beta/delta [EC:2.7.1.153]
K01394  MMP3; matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:3.4.24.17]
K01403  MMP9; matrix metalloproteinase-9 (gelatinase B) [EC:3.4.24.35]
K02187  CASP3; caspase 3 [EC:3.4.22.56]
K02373  FADD; FAS-associated death domain protein
K02580  NFKB1; nuclear factor NF-kappa-B p105 subunit
K02649  PIK3R1_2_3; phosphoinositide-3-kinase regulatory subunit alpha/beta/delta
K02861  RIPK1, RIP1; receptor-interacting serine/threonine-protein kinase 1 [EC:2.7.11.1]
K03156  TNF, TNFA; tumor necrosis factor superfamily, member 2
K03158  TNFRSF1A, TNFR1, CD120a; tumor necrosis factor receptor superfamily member 1A
K03171  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein
K03172  TRAF1; TNF receptor-associated factor 1
K03173  TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
K03174  TRAF3; TNF receptor-associated factor 3
K04368  MAP2K1, MEK1; mitogen-activated protein kinase kinase 1 [EC:2.7.12.2]
K04371  ERK, MAPK1_3; mitogen-activated protein kinase 1/3 [EC:2.7.11.24]
K04374  ATF4, CREB2; cyclic AMP-dependent transcription factor ATF-4
K04379  FOS; proto-oncogene protein c-fos
K04390  TNFRSF6, FAS, CD95; tumor necrosis factor receptor superfamily member 6
K04397  CASP7; caspase 7 [EC:3.4.22.60]
K04398  CASP8; caspase 8 [EC:3.4.22.61]
K04400  CASP10; caspase 10 [EC:3.4.22.63]
K04403  MAP3K7IP1, TAB1; TAK1-binding protein 1
K04404  MAP3K7IP2, TAB2; TAK1-binding protein 2
K04415  MAP3K8, COT; mitogen-activated protein kinase kinase kinase 8 [EC:2.7.11.25]
K04426  MAP3K5, ASK1; mitogen-activated protein kinase kinase kinase 5 [EC:2.7.11.25]
K04427  MAP3K7, TAK1; mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25]
K04430  MAP2K4, MKK4; mitogen-activated protein kinase kinase 4 [EC:2.7.12.2]
K04431  MAP2K7, MKK7; mitogen-activated protein kinase kinase 7 [EC:2.7.12.2]
K04432  MAP2K3, MKK3; mitogen-activated protein kinase kinase 3 [EC:2.7.12.2]
K04433  MAP2K6, MKK6; mitogen-activated protein kinase kinase 6 [EC:2.7.12.2]
K04440  JNK; mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase) [EC:2.7.11.24]
K04441  P38; p38 MAP kinase [EC:2.7.11.24]
K04445  RPS6KA5, MSK1; ribosomal protein S6 kinase alpha-5 [EC:2.7.11.1]
K04448  JUN; transcription factor AP-1
K04450  ATF2, CREBP1; cyclic AMP-dependent transcription factor ATF-2
K04456  AKT; RAC serine/threonine-protein kinase [EC:2.7.11.1]
K04466  MAP3K14, NIK; mitogen-activated protein kinase kinase kinase 14 [EC:2.7.11.25]
K04467  IKBKA, IKKA, CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [EC:2.7.11.10]
K04519  IL1B; interleukin 1 beta
K04696  SOCS3, CIS3; suppressor of cytokine signaling 3
K04724  CFLAR, FLIP; CASP8 and FADD-like apoptosis regulator
K04725  XIAP, BIRC4; E3 ubiquitin-protein ligase XIAP [EC:2.3.2.27]
K04734  NFKBIA; NF-kappa-B inhibitor alpha
K04735  RELA; transcription factor p65
K05141  TNFRSF1B, TNFR2, CD120b; tumor necrosis factor receptor superfamily member 1B
K05173  IL18R1, IL1RRP, CD218a; interleukin 18 receptor 1
K05405  IL6; interleukin 6
K05415  IFNB; interferon beta
K05419  LIF; leukemia inhibitory factor
K05427  CSF2, GMCSF; granulocyte-macrophage colony-stimulating factor
K05433  IL15; interleukin 15
K05449  VEGFC_D; vascular endothelial growth factor C/D
K05453  CSF1, MCSF; macrophage colony-stimulating factor 1
K05468  LTA, TNFB; lymphotoxin alpha (TNF superfamily, member 1)
K05505  CXCL1_2_3, GRO; C-X-C motif chemokine 1/2/3
K05506  CXCL5_6, SCYB5_6; C-X-C motif chemokine 5/6
K05508  CX3CL1, NTT; C-X3-C motif chemokine 1
K05632  ITCH, AIP4; E3 ubiquitin-protein ligase Itchy [EC:2.3.2.26]
K05870  CREB1; cyclic AMP-responsive element-binding protein 1
K06052  JAG1, CD339; jagged-1
K06059  ADAM17, TACE, CD156b; disintegrin and metalloproteinase domain-containing protein 17 [EC:3.4.24.86]
K06490  ICAM1, CD54; intercellular adhesion molecule 1
K06494  SELE, CD62E; selectin, endothelial cell
K06527  VCAM1, CD106; vascular cell adhesion molecule 1
K07209  IKBKB, IKKB; inhibitor of nuclear factor kappa-B kinase subunit beta [EC:2.7.11.10]
K07210  IKBKG, IKKG, NEMO; inhibitor of nuclear factor kappa-B kinase subunit gamma
K07763  MMP14; matrix metalloproteinase-14 (membrane-inserted) [EC:3.4.24.80]
K08601  CYLD, USLP2; ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
K08847  RIPK3; receptor-interacting serine/threonine-protein kinase 3 [EC:2.7.11.1]
K08849  MLKL; mixed lineage kinase domain-like [EC:2.7.11.1]
K09028  JUNB; transcription factor jun-B
K09047  CREB5, CREBPA; cyclic AMP-responsive element-binding protein 5
K09048  CREB3; cyclic AMP-responsive element-binding protein 3
K09049  ATF6B, CREBL1; cyclic AMP-dependent transcription factor ATF-6 beta
K09258  BCL3; B-cell CLL/lymphoma 3 protein
K09444  IRF1; interferon regulatory factor 1
K09558  BAG4; BCL2-associated athanogene 4
K09849  TRAF5; TNF receptor-associated factor 5
K10048  CEBPB; CCAAT/enhancer binding protein (C/EBP), beta
K10165  NOD2, CARD15; nucleotide-binding oligomerization domain-containing protein 2
K11859  TNFAIP3, A20, OTUD7C; tumor necrosis factor, alpha-induced protein 3 [EC:3.4.19.12]
K11987  PTGS2, COX2; prostaglandin-endoperoxide synthase 2 [EC:1.14.99.1]
K12499  CCL5; C-C motif chemokine 5
K12671  CXCL10, IP10; C-X-C motif chemokine 10
K12793  MAP3K7IP3, TAB3; TAK1-binding protein 3
K14624  CCL2, MCP1; C-C motif chemokine 2
K14625  CCL20; C-C motif chemokine 20
K15637  PGAM5; serine/threonine-protein phosphatase PGAM5 [EC:3.1.3.16]
K16060  BIRC2_3; baculoviral IAP repeat-containing protein 2/3
K16366  EDN1; endothelin-1
K16510  RPS6KA4, MSK2; ribosomal protein S6 kinase alpha-4 [EC:2.7.11.1]
K17065  DNM1L; dynamin 1-like protein [EC:3.6.5.5]
K17072  IFI47; interferon gamma inducible protein 47
K19901  DAB2IP, AIP1; disabled homolog 2-interacting protein
K23972  FRMD8; FERM domain-containing protein 8
K27588  RHBDF; inactive rhomboid protein
Reference
  Authors
Chu WM
  Title
Tumor necrosis factor.
  Journal
Cancer Lett 328:222-5 (2013)
DOI:10.1016/j.canlet.2012.10.014
Reference
  Authors
Shuh M, Bohorquez H, Loss GE Jr, Cohen AJ
  Title
Tumor Necrosis Factor-alpha: Life and Death of Hepatocytes During Liver Ischemia/Reperfusion Injury.
  Journal
Ochsner J 13:119-30 (2013)
Reference
  Authors
MacEwan DJ
  Title
TNF receptor subtype signalling: differences and cellular consequences.
  Journal
Cell Signal 14:477-92 (2002)
DOI:10.1016/S0898-6568(01)00262-5
Reference
  Authors
Newton K, Dixit VM
  Title
Signaling in innate immunity and inflammation.
  Journal
Cold Spring Harb Perspect Biol 4:a006049 (2012)
DOI:10.1101/cshperspect.a006049
Reference
  Authors
Pomerantz JL, Baltimore D
  Title
NF-kappaB activation by a signaling complex containing TRAF2, TANK and TBK1, a novel IKK-related kinase.
  Journal
EMBO J 18:6694-704 (1999)
DOI:10.1093/emboj/18.23.6694
Reference
  Authors
Naude PJ, den Boer JA, Luiten PG, Eisel UL
  Title
Tumor necrosis factor receptor cross-talk.
  Journal
FEBS J 278:888-98 (2011)
DOI:10.1111/j.1742-4658.2011.08017.x
Reference
  Authors
Faustman D, Davis M
  Title
TNF receptor 2 pathway: drug target for autoimmune diseases.
  Journal
Nat Rev Drug Discov 9:482-93 (2010)
DOI:10.1038/nrd3030
Reference
  Authors
Chan FK, Shisler J, Bixby JG, Felices M, Zheng L, Appel M, Orenstein J, Moss B, Lenardo MJ
  Title
A role for tumor necrosis factor receptor-2 and receptor-interacting protein in programmed necrosis and antiviral responses.
  Journal
J Biol Chem 278:51613-21 (2003)
DOI:10.1074/jbc.M305633200
Reference
  Authors
Lee MY, Nam KH, Choi KC
  Title
iRhoms; Its Functions and Essential Roles.
  Journal
Biomol Ther (Seoul) 24:109-14 (2016)
DOI:10.4062/biomolther.2015.149
Related
pathway
ko04010  MAPK signaling pathway
ko04064  NF-kappa B signaling pathway
ko04120  Ubiquitin mediated proteolysis
ko04151  PI3K-Akt signaling pathway
ko04210  Apoptosis

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