Entry
Name
Endocytosis - Mus pahari (shrew mouse)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Mus pahari (shrew mouse) [GN:
mpah ]
Gene
110312804 Vps29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
110312875 Vps37b; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
110312934 Vps37d; vacuolar protein sorting-associated protein 37D isoform X1 [KO:K12185 ]
110313429 Iqsec2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
110313918 Il2rg; cytokine receptor common subunit gamma isoform X1 [KO:K05070 ]
110314275 Sh3kbp1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
110315931 Agap3; LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 [KO:K12491 ]
110316227 Rab11fip5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
110316323 Arpc4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
110316358 Iqsec3; IQ motif and SEC7 domain-containing protein 3 [KO:K12495 ]
110316396 Wasl; neural Wiskott-Aldrich syndrome protein isoform X1 [KO:K23612 ]
110317347 Iqsec1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
110317348 Arap1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
110318290 Arfgef2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
110318348 Stam2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
110318541 Arpc5l; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
110318858 Arfgap1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
110319501 Tsg101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
110319582 Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
110319871 Vps45; vacuolar protein sorting-associated protein 45 [KO:K12479 ]
110321305 Agap1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
110321353 Vps4b; vacuolar protein sorting-associated protein 4B [KO:K12196 ]
110321362 Arpc2; actin-related protein 2/3 complex subunit 2 isoform X1 [KO:K05758 ]
110321655 Smap1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
110321734 Arpc5; actin-related protein 2/3 complex subunit 5 isoform X1 [KO:K05754 ]
110322743 Capzb; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
110322847 Cdc42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
110322938 Dnajc6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
110323305 Zfyve9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
110323317 Vps37c; vacuolar protein sorting-associated protein 37C [KO:K12185 ]
110323380 Asap3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
110323658 Ldlrap1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
110323951 Acap3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
110324436 Asap2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
110326212 Agap2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
110326213 Vps26a; vacuolar protein sorting-associated protein 26A isoform X1 [KO:K18466 ]
110326437 Rab11fip2; rab11 family-interacting protein 2 isoform X1 [KO:K12484 ]
110326985 Gbf1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
110327298 Vps26b; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
110328625 Pdcd6ip; programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
110329047 Zfyve16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
110330039 Acap2; LOW QUALITY PROTEIN: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 [KO:K12489 ]
110330837 Arap2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 [KO:K18440 ]
110331380 Hgs; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
110331409 Rabep1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
110331722 Acap1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 [KO:K12489 ]
110331755 Vps25; vacuolar protein-sorting-associated protein 25 isoform X1 [KO:K12189 ]
110332148 Chmp6; charged multivesicular body protein 6 isoform X1 [KO:K12195 ]
110332834 Smad2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
110333052 Bin1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
110333097 Psd2; PH and SEC7 domain-containing protein 2 isoform X1 [KO:K12494 ]
110333208 Arap3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
110334587 Vps28; vacuolar protein sorting-associated protein 28 homolog isoform X1 [KO:K12184 ]
110334920 Arfgap3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
110335261 Asap1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
110336173 Vps37a; vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
110336218 Eps15l1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
110336457 Vps36; vacuolar protein-sorting-associated protein 36 isoform X1 [KO:K12190 ]
110336459 Psd3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
110336804 Rab11fip1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
110337219 Vps35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
110337228 Pard6a; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
110337232 Vps4a; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
110338103 Igf2r; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
110338163 Vta1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
110338179 Rab11fip3; rab11 family-interacting protein 3 isoform X1 [KO:K12485 ]
110338944 Arfgef1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
110339090 Arpc1b; actin-related protein 2/3 complex subunit 1B isoform X1 [KO:K05757 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
mpah04060 Cytokine-cytokine receptor interaction
mpah04070 Phosphatidylinositol signaling system
mpah04130 SNARE interactions in vesicular transport
KO pathway