KEGG   PATHWAY: bfo04820
Entry
bfo04820                    Pathway                                
Name
Cytoskeleton in muscle cells - Branchiostoma floridae (Florida lancelet)
Class
Cellular Processes; Cell motility
Pathway map
bfo04820  Cytoskeleton in muscle cells
bfo04820

Organism
Branchiostoma floridae (Florida lancelet) [GN:bfo]
Gene
118420599  collagen alpha-1(V) chain-like isoform X1 [KO:K19721]
118421184  collagen alpha-1(I) chain-like [KO:K19721]
118421785  collagen alpha-1(I) chain-like [KO:K19721]
118410107  collagen alpha-3(IX) chain-like isoform X1 [KO:K08131]
118425044  decorin-like [KO:K04660]
118421862  decorin-like [KO:K04660]
118404151  collagen alpha-3(VI) chain-like [KO:K06238]
118404159  collagen alpha-1(XII) chain-like [KO:K06238]
118404170  uncharacterized protein LOC118404170 [KO:K06238]
118404179  uncharacterized protein LOC118404179 [KO:K06238]
118432772  uncharacterized protein LOC118432772 [KO:K06238]
118427034  collagen alpha-3(VI) chain-like [KO:K06238]
118427036  collagen alpha-3(VI) chain-like [KO:K06238]
118427037  uncharacterized protein LOC118427037 [KO:K06238]
118423864  thrombospondin-2-like isoform X1 [KO:K04659]
118406477  cartilage oligomeric matrix protein-like [KO:K04659]
118406912  cartilage oligomeric matrix protein-like isoform X1 [KO:K04659]
118407973  cartilage oligomeric matrix protein-like [KO:K04659]
118424189  cartilage oligomeric matrix protein-like [KO:K04659]
118424195  neurogenic locus notch homolog protein 1-like [KO:K04659]
118424933  uncharacterized protein LOC118424933 [KO:K04659]
118428513  mucin-like protein [KO:K06825]
118420963  fibrillin-1-like [KO:K06825]
118409491  fibrillin-2-like isoform X1 [KO:K23342]
118410575  kielin/chordin-like protein isoform X1 [KO:K23342]
118412003  collagen alpha-5(IV) chain-like isoform X1 [KO:K06237]
118405341  collagen alpha-2(IV) chain-like [KO:K06237]
118427234  collagen alpha-5(IV) chain-like isoform X1 [KO:K06237]
118427235  collagen alpha-2(IV) chain-like isoform X1 [KO:K06237]
118427287  nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X1 [KO:K06237]
118415766  fibulin-2-like isoform X1 [KO:K17307]
118411583  hemicentin-1-like [KO:K17307]
118424891  fibrillin-1-like [KO:K17307]
118423076  neurogenic locus Notch protein-like [KO:K17307]
118431007  basement membrane-specific heparan sulfate proteoglycan core protein-like isoform X1 [KO:K06255]
118405168  syndecan-2-B-like isoform X1 [KO:K16336]
118430198  agrin-like [KO:K06254]
118409117  non-neuronal cytoplasmic intermediate filament protein-like [KO:K07606]
118409400  vimentin-like isoform X1 [KO:K07606]
118432767  non-neuronal cytoplasmic intermediate filament protein-like [KO:K07606]
118423047  low molecular weight neuronal intermediate filament-like isoform X1 [KO:K07606]
118409118  non-neuronal cytoplasmic intermediate filament protein-like [KO:K07610]
118408193  laminin subunit alpha-2-like [KO:K05637]
118408556  laminin subunit alpha-2-like [KO:K05637]
118422698  integrin alpha-6-like isoform X1 [KO:K06483]
118424962  integrin alpha-5-like [KO:K06484]
118424626  integrin alpha-6-like isoform X1 [KO:K06485]
118424694  integrin alpha-6-like [KO:K06583]
118424834  integrin alpha-8-like [KO:K06584]
118424961  integrin alpha-5-like [KO:K06584]
118423986  integrin beta-1-like [KO:K05719]
118409649  integrin beta-1-like [KO:K05719]
118411994  talin-1-like [KO:K06271]
118418041  vinculin-like isoform X1 [KO:K05700]
118412592  actin, muscle-like [KO:K05692]
118404043  actin-2-like [KO:K05692]
118424559  actin, cytoplasmic A3a isoform X1 [KO:K05692]
118424560  actin CyI, cytoplasmic-like [KO:K05692]
118428830  actin, cytoplasmic [KO:K05692]
118428928  actin-3-like [KO:K05692]
118428930  actin, adductor muscle-like [KO:K05692]
118428931  actin-1-like [KO:K05692]
118428932  actin-3-like [KO:K05692]
118428933  actin-3-like [KO:K05692]
118428934  actin, cytoplasmic-like [KO:K05692]
118428935  actin, cytoplasmic-like [KO:K05692]
118429842  actin-5-like isoform X1 [KO:K05692]
118421789  actin-2-like [KO:K05692]
118430578  actin-2-like [KO:K05692]
118430581  actin, cytoplasmic-like [KO:K05692]
118430584  actin-2-like [KO:K05692]
118431028  actin, cytoskeletal 3-like isoform X1 [KO:K05692]
118415977  dystroglycan-like isoform X1 [KO:K06265]
118415982  dystroglycan-like [KO:K06265]
118405734  epsilon-sarcoglycan-like isoform X1 [KO:K27061]
118419302  beta-sarcoglycan-like [KO:K12566]
118419985  zeta-sarcoglycan-like [KO:K12563]
118415995  sarcospan-like isoform X1 [KO:K22194]
118422915  dystrophin-like isoform X1 [KO:K10366]
118417301  beta-2-syntrophin-like isoform X1 [KO:K24064]
118416663  filamin-C-like [KO:K27393]
118424338  sodium/potassium-transporting ATPase subunit alpha-3-like [KO:K01539] [EC:7.2.2.13]
118427323  sodium/potassium-transporting ATPase subunit beta-1-like [KO:K01540]
118421631  spectrin alpha chain, non-erythrocytic 1-like isoform X1 [KO:K06114]
118416618  spectrin beta chain, non-erythrocytic 1-like isoform X1 [KO:K06115]
118422378  dystrophin-like [KO:K06115]
118423381  spectrin beta chain, non-erythrocytic 5-like [KO:K06115]
118414497  cysteine and glycine-rich protein 2-like isoform X1 [KO:K09377]
118415379  myosin-7-like [KO:K24220]
118415479  myosin-7-like [KO:K24220]
118415480  myosin-7-like isoform X1 [KO:K24220]
118415484  myosin-7-like [KO:K24220]
118416239  myosin-7-like [KO:K24220]
118416241  myosin-7-like [KO:K24220]
118428943  myosin-16-like isoform X1 [KO:K24220]
118422853  myosin-6-like [KO:K24220]
118422854  myosin-16-like isoform X1 [KO:K24220]
118422855  myosin-7-like [KO:K24220]
118422858  myosin-7-like [KO:K24220]
118422859  myosin-7-like [KO:K24220]
118422860  myosin-7-like [KO:K24220]
118422863  myosin-7-like [KO:K24220]
118423035  myosin-7-like [KO:K24220]
118423444  myosin-16-like isoform X1 [KO:K24220]
118423446  myosin-16-like [KO:K24220]
118422862  myosin-7-like [KO:K17751]
118422861  myosin-7-like [KO:K17751]
118429641  myosin-11-like isoform X1 [KO:K10352]
118403151  myosin, essential light chain isoform X1 [KO:K05738]
118409548  myosin regulatory light chain 12B-like isoform X1 [KO:K12755]
118429843  actin, muscle isoform X1 [KO:K12314]
118429844  actin, muscle-like [KO:K12314]
118429845  actin, muscle-like [KO:K12314]
118429846  actin, muscle-like [KO:K12314]
118429849  actin, alpha cardiac muscle 2 [KO:K12314]
118429855  actin, muscle-like [KO:K12314]
118414897  troponin T, fast skeletal muscle-like [KO:K10372]
118430703  troponin C, skeletal muscle-like isoform X1 [KO:K12042]
118430704  troponin C, skeletal muscle-like [KO:K12042]
118430742  troponin C isoform X1 [KO:K12042]
118430743  troponin C-like [KO:K12042]
118430744  troponin C-like isoform X1 [KO:K12042]
118430507  troponin I, fast skeletal muscle-like [KO:K12043]
118413375  troponin T, fast skeletal muscle-like isoform X1 [KO:K12045]
118407653  tropomyosin-1-like isoform X1 [KO:K09290]
118410327  tropomyosin isoform X1 [KO:K09290]
118405513  titin-like [KO:K12567] [EC:2.7.11.1]
118405877  titin-like [KO:K12567] [EC:2.7.11.1]
118403155  nebulin-like isoform X1 [KO:K18267]
118432830  nebulin-like [KO:K18267]
118415165  PDZ and LIM domain protein 3-like isoform X1 [KO:K23353]
118408732  PDZ and LIM domain protein 3-like [KO:K23353]
118409879  PDZ and LIM domain protein 4-like [KO:K23353]
118415290  F-actin-capping protein subunit alpha-1-like isoform X1 [KO:K10364]
118430429  F-actin-capping protein subunit beta isoform X1 [KO:K10365]
118412353  PDZ and LIM domain protein 7-like isoform X1 [KO:K19867]
118412377  PDZ and LIM domain protein 7-like isoform X1 [KO:K19867]
118411196  tropomodulin-1-like isoform X1 [KO:K10370]
118406768  ankyrin repeat domain-containing protein 2-like isoform X1 [KO:K21434]
118424824  formin-like protein 2 [KO:K23957]
118428925  formin-like protein 3 isoform X1 [KO:K23957]
118418763  formin-J-like isoform X1 [KO:K23958]
118419076  inverted formin-2-like isoform X1 [KO:K23958]
118421655  disheveled-associated activator of morphogenesis 2-like isoform X1 [KO:K04512]
118418906  protein diaphanous homolog 2-like isoform X1 [KO:K05741]
118430643  enolase-like [KO:K01689] [EC:4.2.1.11]
118410758  titin homolog isoform X1 [KO:K09255]
118415728  creatine kinase M-type-like isoform X1 [KO:K27382] [EC:2.7.3.2]
118421855  tripartite motif-containing protein 54-like [KO:K10653]
118404222  tripartite motif-containing protein 55-like isoform X1 [KO:K10654]
118405574  AMP deaminase 1-like isoform X1 [KO:K01490] [EC:3.5.4.6]
118424815  AMP deaminase 2-like isoform X1 [KO:K01490] [EC:3.5.4.6]
118405652  LOW QUALITY PROTEIN: muscle M-line assembly protein unc-89-like [KO:K17531] [EC:2.7.11.1]
118430052  calpain-9-like isoform X1 [KO:K08573] [EC:3.4.22.54]
118411261  LOW QUALITY PROTEIN: nesprin-1-like [KO:K19326]
118429719  SUN domain-containing protein 2-like isoform X1 [KO:K19347]
118416775  transmembrane protein 43-like isoform X1 [KO:K27488]
118414075  delta(14)-sterol reductase TM7SF2-like isoform X1 [KO:K19532] [EC:1.3.1.70]
118409698  lamin-B1-like isoform X1 [KO:K07611]
Reference
PMID:12142273
  Authors
Clark KA, McElhinny AS, Beckerle MC, Gregorio CC
  Title
Striated muscle cytoarchitecture: an intricate web of form and function.
  Journal
Annu Rev Cell Dev Biol 18:637-706 (2002)
DOI:10.1146/annurev.cellbio.18.012502.105840
Reference
PMID:31407867
  Authors
Mukund K, Subramaniam S
  Title
Skeletal muscle: A review of molecular structure and function, in health and disease.
  Journal
Wiley Interdiscip Rev Syst Biol Med 12:e1462 (2020)
DOI:10.1002/wsbm.1462
Reference
PMID:24481844
  Authors
Stroud MJ, Banerjee I, Veevers J, Chen J
  Title
Linker of nucleoskeleton and cytoskeleton complex proteins in cardiac structure, function, and disease.
  Journal
Circ Res 114:538-48 (2014)
DOI:10.1161/CIRCRESAHA.114.301236
Reference
PMID:28640448
  Authors
Henderson CA, Gomez CG, Novak SM, Mi-Mi L, Gregorio CC
  Title
Overview of the Muscle Cytoskeleton.
  Journal
Compr Physiol 7:891-944 (2017)
DOI:10.1002/cphy.c160033
Reference
PMID:32265741
  Authors
Csapo R, Gumpenberger M, Wessner B
  Title
Skeletal Muscle Extracellular Matrix - What Do We Know About Its Composition, Regulation, and Physiological Roles? A Narrative Review.
  Journal
Front Physiol 11:253 (2020)
DOI:10.3389/fphys.2020.00253
Reference
PMID:27114860
  Authors
Pinch M, Guth R, Samanta MP, Chaidez A, Unguez GA
  Title
The myogenic electric organ of Sternopygus macrurus: a non-contractile tissue with a skeletal muscle transcriptome.
  Journal
PeerJ 4:e1828 (2016)
DOI:10.7717/peerj.1828
Reference
PMID:23860255
  Authors
Sequeira V, Nijenkamp LL, Regan JA, van der Velden J
  Title
The physiological role of cardiac cytoskeleton and its alterations in heart failure.
  Journal
Biochim Biophys Acta 1838:700-22 (2014)
DOI:10.1016/j.bbamem.2013.07.011
Reference
PMID:36960155
  Authors
Zhang B, Powers JD, McCulloch AD, Chi NC
  Title
Nuclear mechanosignaling in striated muscle diseases.
  Journal
Front Physiol 14:1126111 (2023)
DOI:10.3389/fphys.2023.1126111
Reference
PMID:21464301
  Authors
Al-Amoudi A, Castano-Diez D, Devos DP, Russell RB, Johnson GT, Frangakis AS
  Title
The three-dimensional molecular structure of the desmosomal plaque.
  Journal
Proc Natl Acad Sci U S A 108:6480-5 (2011)
DOI:10.1073/pnas.1019469108
Reference
PMID:33067392
  Authors
Sikora M, Ermel UH, Seybold A, Kunz M, Calloni G, Reitz J, Vabulas RM, Hummer G, Frangakis AS
  Title
Desmosome architecture derived from molecular dynamics simulations and cryo-electron tomography.
  Journal
Proc Natl Acad Sci U S A 117:27132-27140 (2020)
DOI:10.1073/pnas.2004563117
Reference
PMID:26910421
  Authors
Xu XP, Kim E, Swift M, Smith JW, Volkmann N, Hanein D
  Title
Three-Dimensional Structures of Full-Length, Membrane-Embedded Human alpha(IIb)beta(3) Integrin Complexes.
  Journal
Biophys J 110:798-809 (2016)
DOI:10.1016/j.bpj.2016.01.016
Reference
PMID:22945352
  Authors
Wang W, Shi Z, Jiao S, Chen C, Wang H, Liu G, Wang Q, Zhao Y, Greene MI, Zhou Z
  Title
Structural insights into SUN-KASH complexes across the nuclear envelope.
  Journal
Cell Res 22:1440-52 (2012)
DOI:10.1038/cr.2012.126
Reference
PMID:23597672
  Authors
Sosa BA, Kutay U, Schwartz TU
  Title
Structural insights into LINC complexes.
  Journal
Curr Opin Struct Biol 23:285-91 (2013)
DOI:10.1016/j.sbi.2013.03.005
Reference
PMID:33058875
  Authors
Cruz VE, Esra Demircioglu F, Schwartz TU
  Title
Structural Analysis of Different LINC Complexes Reveals Distinct Binding Modes.
  Journal
J Mol Biol 432:6028-6041 (2020)
DOI:10.1016/j.jmb.2020.09.019
Reference
PMID:36523505
  Authors
Schuler SC, Liu Y, Dumontier S, Grandbois M, Le Moal E, Cornelison D, Bentzinger CF
  Title
Extracellular matrix: Brick and mortar in the skeletal muscle stem cell niche.
  Journal
Front Cell Dev Biol 10:1056523 (2022)
DOI:10.3389/fcell.2022.1056523
Reference
PMID:30425656
  Authors
Brull A, Morales Rodriguez B, Bonne G, Muchir A, Bertrand AT
  Title
The Pathogenesis and Therapies of Striated Muscle Laminopathies.
  Journal
Front Physiol 9:1533 (2018)
DOI:10.3389/fphys.2018.01533
Reference
PMID:36552829
  Authors
Storey EC, Fuller HR
  Title
Genotype-Phenotype Correlations in Human Diseases Caused by Mutations of LINC Complex-Associated Genes: A Systematic Review and Meta-Summary.
  Journal
Cells 11:cells11244065 (2022)
DOI:10.3390/cells11244065
Related
pathway
bfo04512  ECM-receptor interaction
bfo04814  Motor proteins
KO pathway
ko04820   
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