SSDB Best Search Result

Entry:arr:ARUE_c02810 (852 a.a.)
Name:putative DNA ligase-like protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 210 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899     2854     0.510      907     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758     2296     0.455      852     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766     2234     0.449      851     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812     2199     0.434      861     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759     2144     0.437      842     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759     2141     0.437      842     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763     2121     0.454      852     
msm:MSMEG_5570 DNA ligase                               K01971     755     2112     0.439      843     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770     2100     0.428      849     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770     2085     0.427      848     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808     2040     0.434      862     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750     1994     0.425      840     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      963     0.372      548     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      960     0.380      505     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      953     0.358      600     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      946     0.367      540     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      931     0.373      565     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      922     0.337      656     
phe:Phep_1702 DNA ligase D                              K01971     877      921     0.361      529     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      913     0.361      545     
ppu:PP_3260 DNA ligase D                                K01971     833      912     0.377      506     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      899     0.485      301     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      897     0.359      537     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      894     0.352      545     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      891     0.347      608     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      885     0.353      532     
sno:Snov_0819 DNA ligase D                              K01971     842      882     0.349      548     
ssy:SLG_04290 putative DNA ligase                       K01971     835      880     0.353      572     
dsy:DSY0616 hypothetical protein                        K01971     818      867     0.363      496     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771      867     0.344      535     
swi:Swit_3982 DNA ligase D                              K01971     837      857     0.358      525     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      857     0.324      629     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      857     0.361      515     
xau:Xaut_4365 DNA ligase D                              K01971     886      837     0.332      582     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      831     0.339      522     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      830     0.349      533     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      828     0.344      520     
rpa:TX73_018915 DNA ligase D                            K01971     914      821     0.332      573     
rle:pRL120229 putative DNA ligase family protein        K01971     881      819     0.347      536     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      811     0.337      582     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      809     0.341      536     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      784     0.318      594     
amd:AMED_4197 ATP-dependent DNA ligase                  K01971     299      782     0.437      293     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      782     0.408      311     
cpy:Cphy_1729 DNA ligase D                              K01971     813      773     0.337      493     
stp:Strop_3967 DNA primase, small subunit               K01971     302      760     0.419      298     
ase:ACPL_520 DNA ligase (ATP)                           K01971     304      758     0.427      316     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      751     0.412      308     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      739     0.407      302     
sma:SAVERM_2946 putative DNA ligase                     K01971     293      723     0.424      295     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      720     0.309      735     
sco:SCO5308 conserved hypothetical protein              K01971     293      711     0.417      290     
sgu:SGLAU_22865 DNA polymerase LigD, polymerase domain- K01971     290      698     0.420      288     
sgr:SGR_2196 conserved hypothetical protein             K01971     296      678     0.425      299     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      668     0.330      528     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      620     0.344      358     
scl:sce3523 unnamed protein product; High confidence in K01971     762      596     0.340      430     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      596     0.361      327     
afu:AF_1725 DNA ligase, putative                        K01971     313      592     0.369      314     
sro:Sros_6714 DNA primase small subunit                            334      477     0.334      299     
ton:TON_1515 thermostable DNA ligase                    K10747     562      469     0.334      332     
chy:CHY_0025 conserved hypothetical protein             K01971     293      469     0.296      284     
pde:Pden_4186 conserved hypothetical protein            K01971     330      467     0.331      245     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      463     0.323      328     
pab:PAB2002 lig DNA ligase                              K10747     559      452     0.319      326     
pfu:PF1635 DNA ligase (lig)                             K10747     561      449     0.316      339     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      445     0.324      275     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      440     0.296      284     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      436     0.309      301     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      436     0.339      351     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      430     0.310      326     
oih:OB3034 hypothetical conserved protein               K01971     595      426     0.287      289     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      421     0.323      328     
pai:PAE0833 DNA ligase                                  K10747     584      421     0.305      377     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      417     0.293      276     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      415     0.288      302     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      408     0.299      331     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      406     0.313      367     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      402     0.314      357     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      398     0.295      356     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      397     0.289      301     
cne:CNI04170 DNA ligase, putative                       K10747     803      397     0.317      363     
mac:MA_3428 conserved hypothetical protein                         156      396     0.427      164     
tac:Ta1148 DNA ligase related protein                   K10747     588      394     0.308      357     
sto:STK_02230 DNA ligase                                K10747     600      394     0.297      374     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      393     0.296      307     
pto:PTO0672 DNA ligase                                  K10747     590      392     0.313      319     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      391     0.301      335     
mma:MM_1895 ATP-dependent DNA ligase                               579      391     0.291      395     
det:DET0850 conserved hypothetical protein                         183      388     0.455      134     
tcr:506945.80 DNA ligase I                              K10747     699      387     0.279      408     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      387     0.285      424     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      386     0.311      351     
mba:Mbar_A1899 DNA ligase (ATP)                         K10747     568      381     0.293      335     
hal:VNG_0881G DNA ligase                                K10747     561      380     0.293      324     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      379     0.314      363     
mth:MTH_1580 DNA ligase                                 K10747     561      379     0.288      337     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      374     0.305      305     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      373     0.292      384     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      369     0.301      355     
yli:2908208 DNA ligase 1                                K10747     711      367     0.290      314     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      366     0.312      314     
rcu:8265013 DNA ligase 6 isoform X1                               1394      365     0.281      331     
xom:XOO1771 DNA ligase                                             534      364     0.316      288     
hma:rrnAC0463 DNA ligase                                K10747     554      364     0.307      319     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      364     0.324      278     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      363     0.302      344     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      362     0.289      339     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      361     0.291      505     
sot:102603887 DNA ligase 1                                        1441      360     0.275      345     
aae:aq_1394 DNA ligase (ATP dependent)                             585      360     0.321      361     
cpoc:100734013 DNA ligase 1                             K10747     919      359     0.302      328     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      359     0.298      336     
sly:101249429 DNA ligase 6 isoform X1                             1441      359     0.275      345     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      359     0.312      330     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      358     0.304      326     
mmu:16881 DNA ligase 1                                  K10747     916      356     0.298      336     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      355     0.297      327     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      355     0.295      363     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      354     0.303      327     
rno:81513 DNA ligase 1                                  K10747     913      354     0.292      353     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      352     0.318      308     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      352     0.297      317     
vvi:100266816 DNA ligase 6 isoform X1                             1449      351     0.281      331     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      351     0.299      328     
nta:107805422 DNA ligase 6 isoform X1                             1426      350     0.280      329     
hth:HTH_1466 DNA ligase                                            572      350     0.294      323     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      350     0.306      327     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      349     0.302      328     
smo:SELMODRAFT_97261 hypothetical protein                          620      349     0.291      358     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      349     0.302      328     
bta:100124507 DNA ligase 1                              K10747     916      349     0.302      328     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      347     0.299      328     
ssc:100520434 DNA ligase 1                              K10747     923      347     0.303      327     
tps:THAPSDRAFT_268404 ligase                            K10747     633      345     0.287      380     
mdo:100616962 DNA ligase 1-like                                    632      344     0.251      581     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      344     0.319      317     
tgo:7896565 DNA ligase 1, putative                                1331      342     0.261      552     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      342     0.276      322     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      340     0.306      314     
dme:Dmel_CG5602 DNA ligase 1                                       747      339     0.318      327     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      334     0.316      288     
mdm:103426184 DNA ligase 6                                        1407      333     0.279      344     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      333     0.291      326     
ehi:EHI_111060 DNA ligase                               K10747     685      333     0.284      306     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      331     0.314      318     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      328     0.281      370     
cit:102618631 DNA ligase 6 isoform X1                             1402      327     0.278      327     
ncr:NCU06481 DNA ligase                                 K10747     923      325     0.295      366     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      325     0.297      357     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      323     0.286      360     
tva:5466150 DNA ligase 1/3 family member family                    679      323     0.300      313     
zma:103651343 DNA ligase 6                                        1397      322     0.280      339     
ath:AT1G66730 DNA LIGASE 6                                        1396      322     0.282      305     
xla:397978 DNA ligase 1                                 K10747    1070      317     0.298      309     
pmur:107285325 DNA ligase 1                             K10747     944      315     0.316      294     
tca:658633 DNA ligase                                   K10747     756      315     0.293      351     
mtr:11442607 DNA ligase 6 isoform X1                              1409      314     0.261      329     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      314     0.299      281     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      314     0.264      348     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      313     0.282      365     
cin:100181519 DNA ligase 1-like                         K10747    1060      313     0.305      308     
pti:PHATR_51005 hypothetical protein                    K10747     651      310     0.298      363     
xtr:100271763 DNA ligase 1                              K10747    1040      310     0.304      312     
amj:102566879 DNA ligase 1                              K10747     954      308     0.304      329     
fgr:FGSG_05453 DNA ligase                               K10747     867      308     0.274      365     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      308     0.297      290     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      307     0.259      375     
ola:101167483 DNA ligase 1                              K10747     993      307     0.295      308     
gmx:100807673 DNA ligase 6 isoform X1                             1402      307     0.273      326     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      306     0.293      297     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      305     0.261      348     
dre:556995 DNA ligase 1                                 K10747    1058      303     0.298      309     
dne:112995498 DNA ligase 1                              K10747     868      302     0.287      331     
csv:101213447 DNA ligase 1                              K10747     801      301     0.293      317     
zga:ZOBELLIA_2113 DNA ligase                                       554      301     0.273      344     
ani:ANIA_06069 hypothetical protein                     K10747     932      299     0.275      349     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      298     0.280      368     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      297     0.280      368     
mgr:MGG_06370 DNA ligase 1                              K10747     896      297     0.274      299     
nve:5510104 DNA ligase 1                                K10747     959      296     0.293      266     
pif:PITG_04709 DNA ligase, putative                               3896      291     0.270      374     
osa:4324149 DNA ligase 6 isoform X1                               1404      289     0.267      371     
pfl:PFL_6269 Hypothetical protein                       K01971     186      289     0.367      139     
ksk:KSE_05320 hypothetical protein                      K01971     173      276     0.290      162     
smm:Smp_019840.1 DNA ligase I, putative                            783      265     0.301      246     
gla:GL50803_007649 DNA ligase (ATP)                                810      259     0.255      353     
ppp:112290811 DNA ligase 1                              K10747     776      259     0.287      356     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      259     0.313      265     
vpa:VP1477 DNA ligase                                   K26441     280      258     0.302      262     
clv:102083602 DNA ligase 3                              K10776     994      249     0.243      354     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      248     0.268      351     
tru:101068311 DNA ligase 3                              K10776     998      245     0.253      320     
tgu:100220473 DNA ligase 3 isoform X1                   K10776     979      236     0.242      351     
vch:VC_1542 DNA ligase                                  K26441     282      230     0.310      242     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      220     0.315      279     
vfi:VF_1450 DNA ligase                                  K26441     285      217     0.307      274     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      204     0.306      232     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      203     0.282      266     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      198     0.263      281     
nme:NMB2048 DNA ligase                                  K26441     274      170     0.288      257     
ngo:NGO_2034 DNA ligase                                 K26441     274      166     0.284      257     
cps:CPS_4404 DNA ligase, ATP-dependent                  K26441     292      160     0.269      227     
ser:SERP1534 DNA ligase, ATP-dependent                             432      156     0.220      282     
ypk:Y1095.pl unknown                                               365      151     0.243      292     
sty:HCM2.0035c putative DNA ligase                                 440      144     0.232      336     
bvu:BVU_4134 glycoside hydrolase family 2, candidate be K01190     834      139     0.233      344     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      135     0.238      231     
syn:sll0471 unknown protein                                        684      133     0.213      492     
pgi:PG_0216 hypothetical protein                                   166      109     0.293      99      

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