KEGG   PATHWAY: mcoc04218
Entry
mcoc04218                   Pathway                                
Name
Cellular senescence - Mastomys coucha (southern multimammate mouse)
Description
Cellular senescence is a state of irreversible cellular arrest and can be triggered by a number of factors, such as telomere shortening, oncogene activation, irradiation, DNA damage and oxidative stress. It is characterized by enlarged flattened morphology, senescence-associated beta-galactosidase (SA-b-gal) activity, secretion of inflammatory cytokines, growth factors and matrix metalloproteinases, as part of the senescence-associated secretory phenotype (SASP). Cellular senescence is functionally associated with many biological processes including aging, tumor suppression, placental biology, embryonic development, and wound healing.
Class
Cellular Processes; Cell growth and death
Pathway map
mcoc04218  Cellular senescence
mcoc04218

Other DBs
GO: 0090398
Organism
Mastomys coucha (southern multimammate mouse) [GN:mcoc]
Gene
116067942  Lin54; protein lin-54 homolog isoform X1 [KO:K21776]
116068035  [KO:K05863]
116068107  Capn2; calpain-2 catalytic subunit [KO:K03853] [EC:3.4.22.53]
116068143  Chek2; serine/threonine-protein kinase Chk2 isoform X1 [KO:K06641] [EC:2.7.11.1]
116068227  Trpv4; transient receptor potential cation channel subfamily V member 4 [KO:K04973]
116068356  Rad9b; cell cycle checkpoint control protein RAD9B isoform X1 [KO:K10995]
116068447  Tgfb2; transforming growth factor beta-2 proprotein [KO:K13376]
116068749  [KO:K05863]
116068873  Hus1; checkpoint protein HUS1 isoform X1 [KO:K10903]
116069012  Vdac3; voltage-dependent anion-selective channel protein 3 isoform X1 [KO:K15041]
116069093  Eif4ebp1; eukaryotic translation initiation factor 4E-binding protein 1 [KO:K07205]
116069234  Slc25a4; ADP/ATP translocase 1 [KO:K05863]
116069491  Pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
116069845  Rbl2; retinoblastoma-like protein 2 [KO:K16332]
116069997  [KO:K02183]
116070042  E2f4; transcription factor E2F4 [KO:K04682]
116070090  Nfatc3; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
116070218  Igfbp3; insulin-like growth factor-binding protein 3 [KO:K10138]
116070958  Serpine1; plasminogen activator inhibitor 1 [KO:K03982]
116071362  Ppp3r1; calcineurin subunit B type 1 isoform X1 [KO:K06268]
116071915  Chek1; serine/threonine-protein kinase Chk1 isoform X1 [KO:K02216] [EC:2.7.11.1]
116072079  Mre11; double-strand break repair protein MRE11 [KO:K10865]
116072312  Mras; ras-related protein M-Ras [KO:K07831]
116072586  Atr; serine/threonine-protein kinase ATR [KO:K06640] [EC:2.7.11.1]
116072801  Cdc25a; M-phase inducer phosphatase 1 isoform X1 [KO:K06645] [EC:3.1.3.48]
116073048  Ccnb2; G2/mitotic-specific cyclin-B2 [KO:K21770]
116073193  Smad3; mothers against decapentaplegic homolog 3 [KO:K23605]
116073222  Atm; serine-protein kinase ATM isoform X1 [KO:K04728] [EC:2.7.11.1]
116073523  Calml4; calmodulin-like protein 4 isoform X1 [KO:K02183]
116073579  Tgfbr2; TGF-beta receptor type-2 isoform X1 [KO:K04388] [EC:2.7.11.30]
116073648  Mapk6; mitogen-activated protein kinase 6 [KO:K04371] [EC:2.7.11.24]
116073764  Map2k1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
116073851  Ets1; protein C-ets-1 isoform X1 [KO:K02678]
116073929  Pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
116074338  [KO:K06751]
116074448  [KO:K06751]
116074449  [KO:K06751]
116074450  [KO:K06751]
116074451  [KO:K06751]
116074620  [KO:K06751]
116074623  [KO:K06751]
116074625  [KO:K06751]
116074627  [KO:K06751]
116074637  [KO:K06751]
116074638  [KO:K06751]
116074642  [KO:K06751]
116074645  [KO:K06751]
116074664  [KO:K06751]
116074873  Cdk1; cyclin-dependent kinase 1 [KO:K02087] [EC:2.7.11.22 2.7.11.23]
116075017  [KO:K06751]
116075067  Ccnd3; G1/S-specific cyclin-D3 [KO:K10152]
116075078  [KO:K06751]
116075101  Mapk13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
116075178  Cdkn1a; cyclin-dependent kinase inhibitor 1 [KO:K06625]
116075265  Sirt1; NAD-dependent protein deacetylase sirtuin-1 isoform X1 [KO:K11411] [EC:2.3.1.286]
116075282  Mcu; calcium uniporter protein, mitochondrial isoform X1 [KO:K20858]
116075286  Foxo3; forkhead box protein O3 [KO:K09408]
116075357  Traf3ip2; adapter protein CIKS isoform X1 [KO:K21124]
116075380  [KO:K06751]
116075381  [KO:K06751]
116075516  Mapk14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
116075536  Itpr3; inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960]
116075684  Cdk4; cyclin-dependent kinase 4 [KO:K02089] [EC:2.7.11.22]
116075868  Gadd45b; growth arrest and DNA damage-inducible protein GADD45 beta [KO:K04402]
116075923  Mdm2; E3 ubiquitin-protein ligase Mdm2 isoform X1 [KO:K06643] [EC:2.3.2.27]
116076013  Map2k2; dual specificity mitogen-activated protein kinase kinase 2 isoform X1 [KO:K04369] [EC:2.7.12.2]
116076163  Cdk2; cyclin-dependent kinase 2 isoform X1 [KO:K02206] [EC:2.7.11.22]
116077040  Sqstm1; sequestosome-1 isoform X1 [KO:K14381]
116077116  Tp53; cellular tumor antigen p53 isoform X1 [KO:K04451]
116077478  Rad50; DNA repair protein RAD50 [KO:K10866] [EC:3.6.-.-]
116077765  Mapk11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
116077791  Mapk12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
116077938  Map2k3; dual specificity mitogen-activated protein kinase kinase 3 isoform X1 [KO:K04432] [EC:2.7.12.2]
116078562  Tsc2; tuberin isoform X1 [KO:K07207]
116078655  Vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862]
116078965  Fbxw11; F-box/WD repeat-containing protein 11 isoform X1 [KO:K03362]
116079135  Map2k6; dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
116079572  Lin52; protein lin-52 homolog isoform X1 [KO:K21775]
116079614  Ppp1cb; serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 [KO:K06269] [EC:3.1.3.16]
116079684  Zfp36l2; mRNA decay activator protein ZFP36L2 [KO:K18753]
116079779  Akt1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
116079808  Calm1; calmodulin-1 [KO:K02183]
116079993  Calm2; calmodulin-2 [KO:K02183]
116080093  Zfp36l1; mRNA decay activator protein ZFP36L1 [KO:K18753]
116080097  Tgfb3; transforming growth factor beta-3 proprotein [KO:K13377]
116081717  E2f3; transcription factor E2F3 isoform X1 [KO:K06620]
116081743  Gadd45g; growth arrest and DNA damage-inducible protein GADD45 gamma [KO:K04402]
116081777  [KO:K02183]
116082253  Myc; myc proto-oncogene protein [KO:K04377]
116082411  [KO:K02183]
116083170  Rad1; cell cycle checkpoint protein RAD1 isoform X1 [KO:K02830] [EC:3.1.11.2]
116083582  Ccnb1; G2/mitotic-specific cyclin-B1 [KO:K05868]
116083721  Pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
116084124  Ppp3cc; serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
116084337  Cacna1d; voltage-dependent L-type calcium channel subunit alpha-1D isoform X1 [KO:K04851]
116084380  Vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040]
116084618  Nfatc4; nuclear factor of activated T-cells, cytoplasmic 4 isoform X1 [KO:K17334]
116084832  Ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
116084938  Gata4; transcription factor GATA-4 isoform X1 [KO:K09183]
116085075  Rb1; retinoblastoma-associated protein [KO:K06618]
116085641  Mapk1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
116087365  Smad2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500]
116087416  Nfatc1; nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446]
116088044  Nbn; nibrin [KO:K10867]
116088079  Ccne2; G1/S-specific cyclin-E2 isoform X1 [KO:K06626]
116089904  Tsc1; hamartin isoform X1 [KO:K07206]
116090583  Hipk3; homeodomain-interacting protein kinase 3 isoform X1 [KO:K08826] [EC:2.7.11.1]
116090864  Trpm7; transient receptor potential cation channel subfamily M member 7 isoform X1 [KO:K04982] [EC:2.7.11.1]
116090915  Il1a; interleukin-1 alpha [KO:K04383]
116091213  E2f1; transcription factor E2F1 [KO:K17454]
116091233  Slc25a5; ADP/ATP translocase 2 [KO:K05863]
116091283  Rbl1; retinoblastoma-like protein 1 isoform X1 [KO:K04681]
116091337  Mybl2; myb-related protein B [KO:K21769]
116091445  Nfatc2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332]
116091552  Ccnb3; G2/mitotic-specific cyclin-B3 [KO:K21771]
116092673  [KO:K18753]
116092877  Ccna1; cyclin-A1 isoform X1 [KO:K06627]
116093017  Ppid; peptidyl-prolyl cis-trans isomerase D isoform X1 [KO:K05864] [EC:5.2.1.8]
116093530  Nras; GTPase NRas [KO:K07828]
116093536  Hipk1; homeodomain-interacting protein kinase 1 isoform X1 [KO:K08826] [EC:2.7.11.1]
116093825  Nfkb1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
116093830  Ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
116094452  Foxo1; forkhead box protein O1 [KO:K07201]
116094815  Slc25a31; ADP/ATP translocase 4 [KO:K05863]
116094951  E2f5; transcription factor E2F5 isoform X1 [KO:K04682]
116095058  Pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
116095103  Ccna2; cyclin-A2 [KO:K06627]
116095785  E2f2; transcription factor E2F2 [KO:K09389]
116095983  Tgfbr1; TGF-beta receptor type-1 isoform X1 [KO:K04674] [EC:2.7.11.30]
116096012  Ppp3r2; calcineurin subunit B type 2 [KO:K06268]
116096224  [KO:K06621]
116096225  Cdkn2b; cyclin-dependent kinase 4 inhibitor B isoform X1 [KO:K04685]
116096465  Pik3r3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
116096700  Rbbp4; histone-binding protein RBBP4 [KO:K10752]
116097015  Mtor; serine/threonine-protein kinase mTOR isoform X1 [KO:K07203] [EC:2.7.11.1]
116097037  Pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
116097436  Il6; interleukin-6 [KO:K05405]
116097440  Cdk6; cyclin-dependent kinase 6 [KO:K02091] [EC:2.7.11.22]
116097567  Rheb; GTP-binding protein Rheb [KO:K07208]
116098760  Hipk2; homeodomain-interacting protein kinase 2 isoform X1 [KO:K08826] [EC:2.7.11.1]
116098772  Mapkapk2; MAP kinase-activated protein kinase 2 [KO:K04443] [EC:2.7.11.1]
116098819  Rassf5; ras association domain-containing protein 5 isoform X1 [KO:K08015]
116099018  Gadd45a; growth arrest and DNA damage-inducible protein GADD45 alpha [KO:K04402]
116099029  [KO:K05862]
116099362  Itpr1; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958]
116099433  Raf1; RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
116099629  Ccnd2; G1/S-specific cyclin-D2 [KO:K10151]
116099642  Foxm1; forkhead box protein M1 isoform X1 [KO:K09406]
116099791  Kras; GTPase KRas isoform X1 [KO:K07827]
116099798  Itpr2; inositol 1,4,5-trisphosphate receptor type 2 [KO:K04959]
116101711  Calm3; calmodulin-3 [KO:K02183]
116101857  Tgfb1; transforming growth factor beta-1 proprotein [KO:K13375]
116101886  Hipk4; homeodomain-interacting protein kinase 4 [KO:K08826] [EC:2.7.11.1]
116101889  Akt2; RAC-beta serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
116101981  Lin37; protein lin-37 homolog isoform X1 [KO:K21774]
116102054  Ccne1; G1/S-specific cyclin-E1 [KO:K06626]
116102164  Rras; ras-related protein R-Ras isoform X1 [KO:K07829]
116102663  [KO:K02183]
116102825  Rras2; ras-related protein R-Ras2 isoform X1 [KO:K07830]
116102969  Mapk3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
116103285  Ccnd1; G1/S-specific cyclin-D1 isoform X1 [KO:K04503]
116103325  Rad9a; cell cycle checkpoint control protein RAD9A isoform X1 [KO:K10994] [EC:3.1.11.2]
116103326  Ppp1ca; serine/threonine-protein phosphatase PP1-alpha catalytic subunit [KO:K06269] [EC:3.1.3.16]
116103403  Rela; transcription factor p65 isoform X1 [KO:K04735]
116103425  Capn1; calpain-1 catalytic subunit [KO:K01367] [EC:3.4.22.52]
116103746  Pten; phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
116103918  Btrc; F-box/WD repeat-containing protein 1A isoform X1 [KO:K03362]
116104026  Akt3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
116104586  [KO:K10030]
116104637  Ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit [KO:K06269] [EC:3.1.3.16]
116104715  Lin9; protein lin-9 homolog isoform X1 [KO:K21773]
Compound
C00027  Hydrogen peroxide
C00076  Calcium cation
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C07909  Sirolimus
C16844  Hydroxyl radical
Reference
  Authors
Munoz-Espin D, Serrano M
  Title
Cellular senescence: from physiology to pathology.
  Journal
Nat Rev Mol Cell Biol 15:482-96 (2014)
DOI:10.1038/nrm3823
Reference
  Authors
Childs BG, Durik M, Baker DJ, van Deursen JM
  Title
Cellular senescence in aging and age-related disease: from mechanisms to therapy.
  Journal
Nat Med 21:1424-35 (2015)
DOI:10.1038/nm.4000
Reference
  Authors
Sharpless NE, Sherr CJ
  Title
Forging a signature of in vivo senescence.
  Journal
Nat Rev Cancer 15:397-408 (2015)
DOI:10.1038/nrc3960
Reference
  Authors
Fridlyanskaya I, Alekseenko L, Nikolsky N
  Title
Senescence as a general cellular response to stress: A mini-review.
  Journal
Exp Gerontol 72:124-8 (2015)
DOI:10.1016/j.exger.2015.09.021
Reference
  Authors
Lujambio A
  Title
To clear, or not to clear (senescent cells)? That is the question.
  Journal
Bioessays 38 Suppl 1:S56-64 (2016)
DOI:10.1002/bies.201670910
Reference
  Authors
Di Mitri D, Alimonti A
  Title
Non-Cell-Autonomous Regulation of Cellular Senescence in Cancer.
  Journal
Trends Cell Biol 26:215-26 (2016)
DOI:10.1016/j.tcb.2015.10.005
Reference
  Authors
Francica P, Aebersold DM, Medova M
  Title
Senescence as biologic endpoint following pharmacological targeting of receptor tyrosine kinases in cancer.
  Journal
Biochem Pharmacol 126:1-12 (2017)
DOI:10.1016/j.bcp.2016.08.022
Reference
  Authors
Bartling B
  Title
Cellular senescence in normal and premature lung aging.
  Journal
Z Gerontol Geriatr 46:613-22 (2013)
DOI:10.1007/s00391-013-0543-3
Reference
  Authors
Munoz-Espin D, Canamero M, Maraver A, Gomez-Lopez G, Contreras J, Murillo-Cuesta S, Rodriguez-Baeza A, Varela-Nieto I, Ruberte J, Collado M, Serrano M
  Title
Programmed cell senescence during mammalian embryonic development.
  Journal
Cell 155:1104-18 (2013)
DOI:10.1016/j.cell.2013.10.019
Reference
  Authors
Herranz N, Gallage S, Gil J
  Title
TORn about SASP regulation.
  Journal
Cell Cycle 14:3771-2 (2015)
DOI:10.1080/15384101.2015.1105694
Reference
  Authors
Martin N, Bernard D
  Title
Calcium signaling and cellular senescence.
  Journal
Cell Calcium S0143-4160(17)30049-0 (2017)
DOI:10.1016/j.ceca.2017.04.001
Reference
  Authors
Farfariello V, Iamshanova O, Germain E, Fliniaux I, Prevarskaya N
  Title
Calcium homeostasis in cancer: A focus on senescence.
  Journal
Biochim Biophys Acta 1853:1974-9 (2015)
DOI:10.1016/j.bbamcr.2015.03.005
Reference
  Authors
McCarthy DA, Clark RR, Bartling TR, Trebak M, Melendez JA
  Title
Redox control of the senescence regulator interleukin-1alpha and the secretory phenotype.
  Journal
J Biol Chem 288:32149-59 (2013)
DOI:10.1074/jbc.M113.493841
Reference
  Authors
Donninger H, Schmidt ML, Mezzanotte J, Barnoud T, Clark GJ
  Title
Ras signaling through RASSF proteins.
  Journal
Semin Cell Dev Biol 58:86-95 (2016)
DOI:10.1016/j.semcdb.2016.06.007
Reference
  Authors
Barnoud T, Schmidt ML, Donninger H, Clark GJ
  Title
The role of the NORE1A tumor suppressor in Oncogene-Induced Senescence.
  Journal
Cancer Lett 400:30-36 (2017)
DOI:10.1016/j.canlet.2017.04.030
Reference
  Authors
Kang C, Xu Q, Martin TD, Li MZ, Demaria M, Aron L, Lu T, Yankner BA, Campisi J, Elledge SJ
  Title
The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4.
  Journal
Science 349:aaa5612 (2015)
DOI:10.1126/science.aaa5612
Reference
  Authors
Cao X, Li M
  Title
A New Pathway for Senescence Regulation.
  Journal
Genomics Proteomics Bioinformatics 13:333-5 (2015)
DOI:10.1016/j.gpb.2015.11.002
Reference
  Authors
Gire V, Dulic V
  Title
Senescence from G2 arrest, revisited.
  Journal
Cell Cycle 14:297-304 (2015)
DOI:10.1080/15384101.2014.1000134
Reference
  Authors
Mowla SN, Lam EW, Jat PS
  Title
Cellular senescence and aging: the role of B-MYB.
  Journal
Aging Cell 13:773-9 (2014)
DOI:10.1111/acel.12242
Reference
  Authors
Yao H, Chung S, Hwang JW, Rajendrasozhan S, Sundar IK, Dean DA, McBurney MW, Guarente L, Gu W, Ronty M, Kinnula VL, Rahman I
  Title
SIRT1 protects against emphysema via FOXO3-mediated reduction of premature senescence in mice.
  Journal
J Clin Invest 122:2032-45 (2012)
DOI:10.1172/JCI60132
Reference
  Authors
Hwang JW, Yao H, Caito S, Sundar IK, Rahman I
  Title
Redox regulation of SIRT1 in inflammation and cellular senescence.
  Journal
Free Radic Biol Med 61:95-110 (2013)
DOI:10.1016/j.freeradbiomed.2013.03.015
Related
pathway
mcoc04020  Calcium signaling pathway
mcoc04068  FoxO signaling pathway
mcoc04110  Cell cycle
mcoc04115  p53 signaling pathway
mcoc04150  mTOR signaling pathway
KO pathway
ko04218   

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