KEGG   PATHWAY: cbrc05164
Entry
cbrc05164                   Pathway                                
Name
Influenza A - Corvus brachyrhynchos (American crow)
Description
Influenza is a contagious respiratory disease caused by influenza virus infection. Influenza A virus is responsible for both annual seasonal epidemics and periodic worldwide pandemics. Novel strains that cause pandemics arise from avian influenza virus by genetic reassortment among influenza viruses and two surface glycoproteins HA and NA form the basis of serologically distinct virus types. The innate immune system recognizes invaded virus through multiple mechanisms. Viral non-structural NS1 protein is a multifunctional virulence factor that interfere IFN-mediated antiviral response. It inhibits IFN production by blocking activation of transcription factors such as NF-kappa B and IRF3. NS1 further inhibits the activation of IFN-induced antiviral genes. PB1-F2 protein is another virulence factor that induce apoptosis of infected cells, which results in life-threatening bronchiolitis.
Class
Human Diseases; Infectious disease: viral
Pathway map
cbrc05164  Influenza A
cbrc05164

Disease
H00398  Influenza
H00399  Avian influenza
Organism
Corvus brachyrhynchos (American crow) [GN:cbrc]
Gene
103611235  FDPS; farnesyl pyrophosphate synthase [KO:K00787] [EC:2.5.1.1 2.5.1.10]
103611252  ADAR; double-stranded RNA-specific adenosine deaminase [KO:K12968] [EC:3.5.4.37]
103611306  [KO:K07904]
103611483  IL12B; interleukin-12 subunit beta [KO:K05425]
103611747  [KO:K05404]
103611748  [KO:K05404]
103611792  SLC25A6; ADP/ATP translocase 3 [KO:K05863]
103611985  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
103612136  CASP8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
103612168  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
103612190  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
103612289  CDK6; cyclin-dependent kinase 6 isoform X1 [KO:K02091] [EC:2.7.11.22]
103612443  STAT1; signal transducer and activator of transcription 1-alpha/beta [KO:K11220]
103612526  FASLG; tumor necrosis factor ligand superfamily member 6 [KO:K04389]
103612699  RNASEL; LOW QUALITY PROTEIN: 2-5A-dependent ribonuclease [KO:K01165]
103612872  [KO:K14754]
103612879  TMPRSS2; transmembrane protease serine 2 [KO:K09633] [EC:3.4.21.122]
103613130  [KO:K05414]
103613212  SOCS3; suppressor of cytokine signaling 3 [KO:K04696]
103613527  [KO:K08738]
103613552  IL6; interleukin-6 [KO:K05405]
103613742  ACTG1; LOW QUALITY PROTEIN: actin, cytoplasmic 2 [KO:K05692]
103613748  [KO:K06752]
103613942  KPNA1; importin subunit alpha-5 [KO:K23940]
103614012  [KO:K03158]
103614467  DNAJC3; dnaJ homolog subfamily C member 3 [KO:K09523]
103614598  JAK2; tyrosine-protein kinase JAK2 [KO:K04447] [EC:2.7.10.2]
103614682  VDAC1; voltage-dependent anion-selective channel protein 1 [KO:K05862]
103614707  FADD; FAS-associated death domain protein [KO:K02373]
103614801  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
103614813  IFNG; interferon gamma [KO:K04687]
103614865  IRAK4; interleukin-1 receptor-associated kinase 4 [KO:K04733] [EC:2.7.11.1]
103614954  [KO:K04722]
103615287  CHUK; LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
103615410  KPNA7; importin subunit alpha-8 [KO:K15043]
103615413  ACTB; actin, cytoplasmic 1 [KO:K05692]
103615481  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
103615493  CIITA; MHC class II transactivator [KO:K08060] [EC:2.7.11.1]
103615516  PRKCB; LOW QUALITY PROTEIN: protein kinase C beta type [KO:K19662] [EC:2.7.11.13]
103615570  CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 [KO:K14404]
103615719  IL12A; interleukin-12 subunit alpha [KO:K05406]
103616104  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
103616203  CASP9; caspase-9 [KO:K04399] [EC:3.4.22.62]
103616425  DDX58; probable ATP-dependent RNA helicase DDX58 [KO:K12646] [EC:5.6.2.6]
103616654  [KO:K01312] [EC:3.4.21.4]
103616721  RAE1; mRNA export factor [KO:K14298]
103616852  KPNA6; importin subunit alpha-7 [KO:K15042]
103617177  [KO:K01312] [EC:3.4.21.4]
103617180  [KO:K06752]
103617381  NFKB1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
103617674  IFNGR1; interferon gamma receptor 1 [KO:K05132]
103617696  RAF1; RAF proto-oncogene serine/threonine-protein kinase isoform X3 [KO:K04366] [EC:2.7.11.1]
103617983  [KO:K06752]
103618173  APAF1; apoptotic protease-activating factor 1 isoform X1 [KO:K02084]
103618244  EP300; LOW QUALITY PROTEIN: histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
103618331  [KO:K12499]
103618509  IL18; interleukin-18 isoform X3 [KO:K05482]
103618588  NLRX1; NLR family member X1 isoform X1 [KO:K12653]
103618608  TMPRSS4; transmembrane protease serine 4 isoform X2 [KO:K09635] [EC:3.4.21.-]
103619089  KPNA2; importin subunit alpha-1 [KO:K15043]
103619099  [KO:K10652] [EC:2.3.2.27]
103619281  KPNA5; importin subunit alpha-6 [KO:K15042]
103619331  [KO:K01315] [EC:3.4.21.7]
103619761  TLR4; LOW QUALITY PROTEIN: toll-like receptor 4 [KO:K10160]
103619915  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
103619943  [KO:K21348]
103620084  PRKCA; protein kinase C alpha type [KO:K02677] [EC:2.7.11.13]
103620171  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
103620337  IL1B; interleukin-1 beta [KO:K04519]
103620365  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
103620491  CREBBP; CREB-binding protein [KO:K04498] [EC:2.3.1.48]
103620620  RAB11B; ras-related protein Rab-11B [KO:K07905]
103620814  EIF2S1; eukaryotic translation initiation factor 2 subunit 1 [KO:K03237]
103620899  IRF7; interferon regulatory factor 7 [KO:K09447]
103621011  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
103621072  TYK2; non-receptor tyrosine-protein kinase TYK2 [KO:K11219] [EC:2.7.10.2]
103621121  MAVS; mitochondrial antiviral-signaling protein [KO:K12648]
103621179  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
103621191  AKT3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
103621207  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 [KO:K04369] [EC:2.7.12.2]
103621569  JAK1; tyrosine-protein kinase JAK1 isoform X1 [KO:K11217] [EC:2.7.10.2]
103621666  SLC25A5; ADP/ATP translocase 2 [KO:K05863]
103621683  NXT2; NTF2-related export protein 2 [KO:K14285]
103621834  IFNGR2; interferon gamma receptor 2 [KO:K05133]
103621835  IFNAR1; interferon alpha/beta receptor 1 isoform X1 [KO:K05130]
103621837  [KO:K05131]
103621908  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X2 [KO:K02649]
103622106  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
103622243  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
103622485  TLR3; toll-like receptor 3 [KO:K05401]
103622495  CASP3; caspase-3 [KO:K02187] [EC:3.4.22.56]
103622572  SLC25A4; ADP/ATP translocase 1 [KO:K05863]
103622845  RSAD2; radical S-adenosyl methionine domain-containing protein 2 [KO:K15045]
103622911  [KO:K05692]
103622989  XPO1; exportin-1 [KO:K14290]
103623074  [KO:K01312] [EC:3.4.21.4]
103623979  MYD88; LOW QUALITY PROTEIN: myeloid differentiation primary response protein MyD88 [KO:K04729]
103624074  NUP98; nuclear pore complex protein Nup98-Nup96 isoform X1 [KO:K14297]
103624142  EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 [KO:K16195] [EC:2.7.11.1]
103624196  [KO:K01315] [EC:3.4.21.7]
103624307  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
103624603  FAS; tumor necrosis factor receptor superfamily member 6 [KO:K04390]
103624697  BID; BH3-interacting domain death agonist isoform X3 [KO:K04726]
103624971  [KO:K10030]
103624972  [KO:K10030]
103624973  [KO:K10030]
103625029  [KO:K06752]
103625089  TNFSF10; tumor necrosis factor ligand superfamily member 10 [KO:K04721]
103625098  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
103625312  CCND3; G1/S-specific cyclin-D3 isoform X1 [KO:K10152]
103625364  BAK1; bcl-2 homologous antagonist/killer [KO:K14021]
103625573  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
103625618  [KO:K12499]
108448233  [KO:K21348]
108448446  PABPN1L; embryonic polyadenylate-binding protein 2 [KO:K14396]
108449705  [KO:K05415]
Compound
C00027  Hydrogen peroxide
C00080  H+
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Edinger TO, Pohl MO, Stertz S
  Title
Entry of influenza A virus: host factors and antiviral targets.
  Journal
J Gen Virol 95:263-77 (2014)
DOI:10.1099/vir.0.059477-0
Reference
  Authors
Kido H, Okumura Y, Takahashi E, Pan HY, Wang S, Chida J, Le TQ, Yano M
  Title
Host envelope glycoprotein processing proteases are indispensable for entry into human cells by seasonal and highly pathogenic avian influenza viruses.
  Journal
J Mol Genet Med 3:167-75 (2008)
Reference
  Authors
Ramakrishnan B, Viswanathan K, Tharakaraman K, Dancik V, Raman R, Babcock GJ, Shriver Z, Sasisekharan R
  Title
A Structural and Mathematical Modeling Analysis of the Likelihood of Antibody-Dependent Enhancement in Influenza.
  Journal
Trends Microbiol 24:933-943 (2016)
DOI:10.1016/j.tim.2016.09.003
Reference
  Authors
Thanh TT, van Doorn HR, de Jong MD
  Title
Human H5N1 influenza: current insight into pathogenesis.
  Journal
Int J Biochem Cell Biol 40:2671-4 (2008)
DOI:10.1016/j.biocel.2008.05.019
Reference
  Authors
Michael P, Brabant D, Bleiblo F, Ramana CV, Rutherford M, Khurana S, Tai TC, Kumar A, Kumar A
  Title
Influenza A induced cellular signal transduction pathways.
  Journal
J Thorac Dis 5 Suppl 2:S132-41 (2013)
DOI:10.3978/j.issn.2072-1439.2013.07.42
Reference
  Authors
Hale BG, Albrecht RA, Garcia-Sastre A
  Title
Innate immune evasion strategies of influenza viruses.
  Journal
Future Microbiol 5:23-41 (2010)
DOI:10.2217/fmb.09.108
Reference
  Authors
Sharma K, Tripathi S, Ranjan P, Kumar P, Garten R, Deyde V, Katz JM, Cox NJ, Lal RB, Sambhara S, Lal SK
  Title
Influenza A virus nucleoprotein exploits Hsp40 to inhibit PKR activation.
  Journal
PLoS One 6:e20215 (2011)
DOI:10.1371/journal.pone.0020215
Reference
  Authors
Ehrhardt C, Seyer R, Hrincius ER, Eierhoff T, Wolff T, Ludwig S
  Title
Interplay between influenza A virus and the innate immune signaling.
  Journal
Microbes Infect 12:81-7 (2010)
DOI:10.1016/j.micinf.2009.09.007
Reference
  Authors
van de Sandt CE, Kreijtz JH, Rimmelzwaan GF
  Title
Evasion of influenza A viruses from innate and adaptive immune responses.
  Journal
Viruses 4:1438-76 (2012)
DOI:10.3390/v4091438
Reference
  Authors
Long JS, Mistry B, Haslam SM, Barclay WS
  Title
Host and viral determinants of influenza A virus species specificity.
  Journal
Nat Rev Microbiol 17:67-81 (2019)
DOI:10.1038/s41579-018-0115-z
Reference
  Authors
Chen X, Liu S, Goraya MU, Maarouf M, Huang S, Chen JL
  Title
Host Immune Response to Influenza A Virus Infection.
  Journal
Front Immunol 9:320 (2018)
DOI:10.3389/fimmu.2018.00320
Reference
  Authors
Lu X, Masic A, Li Y, Shin Y, Liu Q, Zhou Y
  Title
The PI3K/Akt pathway inhibits influenza A virus-induced Bax-mediated apoptosis by negatively regulating the JNK pathway via ASK1.
  Journal
J Gen Virol 91:1439-49 (2010)
DOI:10.1099/vir.0.018465-0
Reference
  Authors
Ichinohe T, Iwasaki A, Hasegawa H
  Title
Innate sensors of influenza virus: clues to developing better intranasal vaccines.
  Journal
Expert Rev Vaccines 7:1435-45 (2008)
DOI:10.1586/14760584.7.9.1435
Reference
  Authors
Le Sage V, Cinti A, Amorim R, Mouland AJ
  Title
Adapting the Stress Response: Viral Subversion of the mTOR Signaling Pathway.
  Journal
Viruses 8:E152 (2016)
DOI:10.3390/v8060152
Reference
  Authors
Fan Y, Sanyal S, Bruzzone R
  Title
Breaking Bad: How Viruses Subvert the Cell Cycle.
  Journal
Front Cell Infect Microbiol 8:396 (2018)
DOI:10.3389/fcimb.2018.00396
Reference
  Authors
Varga ZT, Palese P
  Title
The influenza A virus protein PB1-F2: killing two birds with one stone?
  Journal
Virulence 2:542-6 (2011)
DOI:10.4161/viru.2.6.17812
Reference
  Authors
Atkin-Smith GK, Duan M, Chen W, Poon IKH
  Title
The induction and consequences of Influenza A virus-induced cell death.
  Journal
Cell Death Dis 9:1002 (2018)
DOI:10.1038/s41419-018-1035-6
Reference
  Authors
Nogales A, Martinez-Sobrido L, Topham DJ, DeDiego ML
  Title
Modulation of Innate Immune Responses by the Influenza A NS1 and PA-X Proteins.
  Journal
Viruses 10:E708 (2018)
DOI:10.3390/v10120708
Reference
  Authors
Dai X, Zhang L, Hong T
  Title
Host cellular signaling induced by influenza virus.
  Journal
Sci China Life Sci 54:68-74 (2011)
DOI:10.1007/s11427-010-4116-z
Reference
  Authors
Li J, Yu M, Zheng W, Liu W
  Title
Nucleocytoplasmic shuttling of influenza A virus proteins.
  Journal
Viruses 7:2668-82 (2015)
DOI:10.3390/v7052668
Reference
  Authors
Dou D, Revol R, Ostbye H, Wang H, Daniels R
  Title
Influenza A Virus Cell Entry, Replication, Virion Assembly and Movement.
  Journal
Front Immunol 9:1581 (2018)
DOI:10.3389/fimmu.2018.01581
Reference
  Authors
Paterson D, Fodor E
  Title
Emerging roles for the influenza A virus nuclear export protein (NEP).
  Journal
PLoS Pathog 8:e1003019 (2012)
DOI:10.1371/journal.ppat.1003019
Related
pathway
cbrc00900  Terpenoid backbone biosynthesis
cbrc03013  Nucleocytoplasmic transport
cbrc03015  mRNA surveillance pathway
cbrc04010  MAPK signaling pathway
cbrc04110  Cell cycle
cbrc04144  Endocytosis
cbrc04210  Apoptosis
cbrc04620  Toll-like receptor signaling pathway
cbrc04621  NOD-like receptor signaling pathway
cbrc04622  RIG-I-like receptor signaling pathway
KO pathway
ko05164   

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