Entry
Name
NOD-like receptor signaling pathway - Cololabis saira (Pacific saury)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
csai04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Cololabis saira (Pacific saury) [GN:
csai ]
Gene
133424272 nucleotide-binding oligomerization domain-containing protein 1-like [KO:K08727 ]
133424393 nucleotide-binding oligomerization domain-containing protein 1-like [KO:K08727 ]
133462483 nfkbiab; nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [KO:K04734 ]
133461206 tnfa; tumor necrosis factor a (TNF superfamily, member 2) [KO:K03156 ]
133421499 nod2; nucleotide-binding oligomerization domain-containing protein 2 [KO:K10165 ]
133442583 tab1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403 ]
133418574 tab2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
133458448 tab3; TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 [KO:K12793 ]
133434362 zgc:92606; gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
133443914 gabarapl2; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
133446126 map1lc3c; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
133447593 map1lc3cl; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
133449202 map1lc3a; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435 ]
133443856 map1lc3b; microtubule-associated proteins 1A/1B light chain 3B [KO:K10435 ]
133420005 trip6; thyroid receptor-interacting protein 6 isoform X1 [KO:K12792 ]
133459634 birc2; baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060 ]
133451200 card9; caspase recruitment domain-containing protein 9 [KO:K12794 ]
133445975 tank; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650 ]
133438568 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
133438586 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
133440453 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
133440648 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
133440649 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
133441137 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
133446011 trpm2; transient receptor potential cation channel subfamily M member 2 isoform X1 [KO:K04977 ] [EC:3.6.1.13 ]
133464448 LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 7-like [KO:K04982 ] [EC:2.7.11.1 ]
133424446 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
133418496 G-protein coupled receptor family C group 6 member A-like isoform X1 [KO:K04622 ]
133440839 G-protein coupled receptor family C group 6 member A-like isoform X1 [KO:K04622 ]
133418720 LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like [KO:K05858 ] [EC:3.1.4.11 ]
133448733 itpr1a; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
133448914 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
133460033 vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
133464017 vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
133419146 voltage-dependent anion-selective channel protein 2-like [KO:K15040 ]
133455117 zgc:56235; voltage-dependent anion-selective channel protein 2-like [KO:K15041 ]
133450691 vdac3; voltage-dependent anion-selective channel protein 3 isoform X1 [KO:K15041 ]
133424888 LOW QUALITY PROTEIN: cytochrome b-245 heavy chain [KO:K21421 ] [EC:1.-.-.-]
133418505 hsp90aa1.2; heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [KO:K04079 ]
133456525 proline-serine-threonine phosphatase-interacting protein 1-like [KO:K12804 ]
133444237 pstpip1a; proline-serine-threonine phosphatase-interacting protein 1a isoform X1 [KO:K12804 ]
133448371 rho-related GTP-binding protein RhoA-D-like isoform X1 [KO:K04513 ]
133425311 stat1a; signal transducer and activator of transcription 1a isoform X1 [KO:K11220 ]
133448749 stat2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221 ]
133423093 myd88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
csai04620 Toll-like receptor signaling pathway
KO pathway
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