KEGG   PATHWAY: tmu05135
Entry
tmu05135                    Pathway                                
Name
Yersinia infection - Trichechus manatus latirostris (Florida manatee)
Description
Pathogenic Yersinia injects virulent Yersinia outer proteins (Yops) into the host cell through a type three secretion system (T3SS) to express its pathogenicity. Through inactivation of small GTPases by YopT protease, YopE GTPase-activating protein, and YpkA/YopO sequestration of GDP-bound small GTPases, Yersinia prevents its uptake by phagocytic cells and disrupts the actin cytoskeleton. YopH phosphatase shuts down phagocytosis by dephosphorylating key host proteins as well as suppresses T cell activation. Yersinia induces macrophage pyroptosis via YopB/YopD activation of canonical and noncanonical inflammasomes and YopT/YopE-mediated activation of pyrin. These effects are counteracted by YopK and YopM. YopP/J is a member of an ubiquitin-like protein cysteine protease family and simultaneously targets signaling components of the MAPK and NF-kappaB signaling pathways following activation of Toll-like receptor4 to inhibit production of proinflammatory cytokines.
Class
Human Diseases; Infectious disease: bacterial
Pathway map
tmu05135  Yersinia infection
tmu05135

Organism
Trichechus manatus latirostris (Florida manatee) [GN:tmu]
Gene
101361092  fibronectin isoform X3 [KO:K05717]
101351755  integrin alpha-4 [KO:K06483]
101340808  integrin alpha-5 [KO:K06484]
101360881  integrin beta-1 [KO:K05719]
101348449  rho-related GTP-binding protein RhoG [KO:K07863]
101342555  proto-oncogene tyrosine-protein kinase Src [KO:K05704] [EC:2.7.10.2]
101351714  focal adhesion kinase 1 isoform X2 [KO:K05725] [EC:2.7.10.2]
101354947  protein-tyrosine kinase 2-beta isoform X3 [KO:K05871] [EC:2.7.10.2]
101355809  crk-like protein [KO:K04438]
101342748  adapter molecule crk isoform X1 [KO:K04438]
101346861  breast cancer anti-estrogen resistance protein 1 [KO:K05726]
101340853  engulfment and cell motility protein 1 [KO:K12366]
101344591  engulfment and cell motility protein 2 isoform X1 [KO:K18985]
101356962  dedicator of cytokinesis protein 1 [KO:K13708]
111820845  LOW QUALITY PROTEIN: uncharacterized protein LOC111820845 [KO:K06856]
101350744  low affinity immunoglobulin gamma Fc region receptor III-like isoform X1 [KO:K06472]
101356054  ras-related C3 botulinum toxin substrate 1 [KO:K04392]
101355428  ras-related C3 botulinum toxin substrate 2 isoform X1 [KO:K07860]
101360313  ras-related C3 botulinum toxin substrate 3 [KO:K07861]
101357217  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma [KO:K00889] [EC:2.7.1.68]
101355488  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1 [KO:K00889] [EC:2.7.1.68]
101361835  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1 [KO:K00889] [EC:2.7.1.68]
101346710  ADP-ribosylation factor 6 [KO:K07941]
101361555  neural Wiskott-Aldrich syndrome protein [KO:K23612]
101343767  actin-related protein 3 isoform X1 [KO:K18584]
101340624  actin-related protein 3B isoform X1 [KO:K18584]
101350907  actin-related protein 2/3 complex subunit 1B [KO:K05757]
101351164  actin-related protein 2/3 complex subunit 1A [KO:K05757]
101343000  actin-related protein 2/3 complex subunit 2 [KO:K05758]
101354182  actin-related protein 2/3 complex subunit 3 isoform X3 [KO:K05756]
101349743  actin-related protein 2/3 complex subunit 4 [KO:K05755]
101360925  actin-related protein 2/3 complex subunit 5-like protein [KO:K05754]
101361501  actin-related protein 2/3 complex subunit 5 [KO:K05754]
101358156  actin, cytoplasmic 1 [KO:K05692]
101344372  actin, cytoplasmic 2 [KO:K05692]
101360841  WAS/WASL-interacting protein family member 1 [KO:K19475]
101361946  WAS/WASL-interacting protein family member 2 [KO:K19475]
101354176  WAS/WASL-interacting protein family member 3 [KO:K19475]
101345102  brain-specific angiogenesis inhibitor 1-associated protein 2 isoform X1 [KO:K05627]
101340374  wiskott-Aldrich syndrome protein family member 2 [KO:K05748]
101359554  paxillin isoform X1 [KO:K05760]
101350066  LOW QUALITY PROTEIN: ARF GTPase-activating protein GIT2 [KO:K12487]
101341934  rho guanine nucleotide exchange factor 7 isoform X1 [KO:K13710]
101361943  cell division control protein 42 homolog isoform X1 [KO:K04393]
101348260  wiskott-Aldrich syndrome protein isoform X2 [KO:K05747]
101347192  guanine nucleotide-binding protein G(q) subunit alpha isoform X1 [KO:K04634]
101358090  rho guanine nucleotide exchange factor 12 isoform X1 [KO:K07532]
101360283  rho guanine nucleotide exchange factor 1 isoform X4 [KO:K12330]
101340368  rho guanine nucleotide exchange factor 28 [KO:K21072]
101356840  transforming protein RhoA [KO:K04513]
101345959  rho-associated protein kinase 2 isoform X4 [KO:K17388] [EC:2.7.11.1]
101348301  FYN-binding protein 1 isoform X1 [KO:K17698]
101342167  src kinase-associated phosphoprotein 2 [KO:K23471]
101343031  NACHT, LRR and PYD domains-containing protein 3 isoform X1 [KO:K12800]
101360631  NLR family CARD domain-containing protein 4 isoform X1 [KO:K12805]
101347479  serine/threonine-protein kinase N1 [KO:K06071] [EC:2.7.11.13]
101357807  serine/threonine-protein kinase N2 isoform X6 [KO:K23691] [EC:2.7.11.13]
101340600  ribosomal protein S6 kinase alpha-2 [KO:K04373] [EC:2.7.11.1]
101344716  ribosomal protein S6 kinase alpha-1 isoform X1 [KO:K04373] [EC:2.7.11.1]
101343514  ribosomal protein S6 kinase alpha-6 [KO:K04373] [EC:2.7.11.1]
101352388  ribosomal protein S6 kinase alpha-3 isoform X5 [KO:K04373] [EC:2.7.11.1]
101356110  pyrin isoform X1 [KO:K12803]
101340836  LIM domain kinase 1 isoform X1 [KO:K05743] [EC:2.7.11.1]
101357919  apoptosis-associated speck-like protein containing a CARD [KO:K12799]
101359297  caspase-1 [KO:K01370] [EC:3.4.22.36]
101348624  interleukin-18 [KO:K05482]
101359415  IL1B; interleukin-1 beta [KO:K04519]
101353470  toll-like receptor 4 [KO:K10160]
101341326  myeloid differentiation primary response protein MyD88 isoform X1 [KO:K04729]
101349224  interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
101350273  interleukin-1 receptor-associated kinase 1 [KO:K04730] [EC:2.7.11.1]
101345331  TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
101354911  TNF receptor-associated factor 2 [KO:K03173] [EC:2.3.2.27]
101344618  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403]
101355146  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404]
101346094  mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
101347574  NF-kappa-B essential modulator isoform X1 [KO:K07210]
101341290  inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
101351256  inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
101355353  NF-kappa-B inhibitor alpha [KO:K04734]
101351866  nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
101361706  transcription factor p65 [KO:K04735]
101343332  dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
101341078  dual specificity mitogen-activated protein kinase kinase 2 [KO:K04369] [EC:2.7.12.2]
101340589  mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
101358526  mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
101355711  dual specificity mitogen-activated protein kinase kinase 3 [KO:K04432] [EC:2.7.12.2]
101344286  dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
101352466  mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
101347350  mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
101361614  mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
101361872  mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
101349700  dual specificity mitogen-activated protein kinase kinase 4 [KO:K04430] [EC:2.7.12.2]
101346746  dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
101351734  mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
101351967  mitogen-activated protein kinase 9 isoform X2 [KO:K04440] [EC:2.7.11.24]
101343546  mitogen-activated protein kinase 8 isoform X4 [KO:K04440] [EC:2.7.11.24]
101357016  proto-oncogene c-Fos [KO:K04379]
101361653  transcription factor AP-1 [KO:K04448]
101358234  TIR domain-containing adapter molecule 1 [KO:K05842]
101345902  serine/threonine-protein kinase TBK1 isoform X3 [KO:K05410] [EC:2.7.11.10]
101348880  interferon regulatory factor 3 [KO:K05411]
101342656  TNF; tumor necrosis factor [KO:K03156]
101351590  interleukin-6 [KO:K05405]
101358515  interleukin-8 [KO:K10030]
101349610  interferon beta [KO:K05415]
101358678  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
101346849  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
101359658  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X2 [KO:K00922] [EC:2.7.1.153]
101351035  phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649]
101343804  phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
101347746  phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
101360493  RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
101356099  RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
101350197  RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
101349186  glycogen synthase kinase-3 beta isoform X1 [KO:K03083] [EC:2.7.11.26]
101358871  C-C motif chemokine 2 [KO:K14624]
101343648  T-cell surface glycoprotein CD4 isoform X3 [KO:K06454]
101343469  T-cell surface glycoprotein CD8 alpha chain isoform X1 [KO:K06458]
101358886  T-cell surface glycoprotein CD8 beta chain [KO:K06459]
101358037  tyrosine-protein kinase Lck isoform X2 [KO:K05856] [EC:2.7.10.2]
111819117  uncharacterized protein LOC111819117 [KO:K10784]
101361451  LOW QUALITY PROTEIN: uncharacterized protein LOC101361451 [KO:K10785]
105756611  uncharacterized protein LOC105756611 [KO:K10785]
101342429  uncharacterized protein LOC101342429 [KO:K10785]
101347632  tyrosine-protein kinase ZAP-70 [KO:K07360] [EC:2.7.10.2]
101356413  linker for activation of T-cells family member 1 isoform X2 [KO:K07362]
101357269  lymphocyte cytosolic protein 2 [KO:K07361]
101343550  guanine nucleotide exchange factor VAV2 [KO:K05730]
101347509  proto-oncogene vav [KO:K05730]
101353271  guanine nucleotide exchange factor VAV3 isoform X2 [KO:K05730]
101359597  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X2 [KO:K01116] [EC:3.1.4.11]
101359059  nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446]
101355751  nuclear factor of activated T-cells, cytoplasmic 2 isoform X2 [KO:K17332]
101352434  nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
101360180  interleukin-2 [KO:K05429]
101342743  interleukin-10 [KO:K05443]
Compound
C00076  Calcium cation
C00338  Lipopolysaccharide
C01245  D-myo-Inositol 1,4,5-trisphosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Pha K, Navarro L
  Title
Yersinia type III effectors perturb host innate immune responses.
  Journal
World J Biol Chem 7:1-13 (2016)
DOI:10.4331/wjbc.v7.i1.1
Reference
  Authors
Pinaud L, Sansonetti PJ, Phalipon A
  Title
Host Cell Targeting by Enteropathogenic Bacteria T3SS Effectors.
  Journal
Trends Microbiol 26:266-283 (2018)
DOI:10.1016/j.tim.2018.01.010
Reference
  Authors
Huveneers S, Danen EH
  Title
Adhesion signaling - crosstalk between integrins, Src and Rho.
  Journal
J Cell Sci 122:1059-69 (2009)
DOI:10.1242/jcs.039446
Reference
  Authors
Angot A, Vergunst A, Genin S, Peeters N
  Title
Exploitation of eukaryotic ubiquitin signaling pathways by effectors translocated by bacterial type III and type IV secretion systems.
  Journal
PLoS Pathog 3:e3 (2007)
DOI:10.1371/journal.ppat.0030003
Reference
  Authors
Bliska JB
  Title
Yop effectors of Yersinia spp. and actin rearrangements.
  Journal
Trends Microbiol 8:205-8 (2000)
DOI:10.1016/S0966-842X(00)01738-8
Reference
  Authors
Gustavsson A, Yuan M, Fallman M
  Title
Temporal dissection of beta1-integrin signaling indicates a role for p130Cas-Crk in filopodia formation.
  Journal
J Biol Chem 279:22893-901 (2004)
DOI:10.1074/jbc.M309693200
Reference
  Authors
Bruce-Staskal PJ, Weidow CL, Gibson JJ, Bouton AH
  Title
Cas, Fak and Pyk2 function in diverse signaling cascades to promote Yersinia uptake.
  Journal
J Cell Sci 115:2689-700 (2002)
Reference
  Authors
McGee K, Zettl M, Way M, Fallman M
  Title
A role for N-WASP in invasin-promoted internalisation.
  Journal
FEBS Lett 509:59-65 (2001)
DOI:10.1016/S0014-5793(01)03139-8
Reference
  Authors
Pizarro-Cerda J, Cossart P
  Title
Subversion of phosphoinositide metabolism by intracellular bacterial pathogens.
  Journal
Nat Cell Biol 6:1026-33 (2004)
DOI:10.1038/ncb1104-1026
Reference
  Authors
Chung LK, Park YH, Zheng Y, Brodsky IE, Hearing P, Kastner DL, Chae JJ, Bliska JB
  Title
The Yersinia Virulence Factor YopM Hijacks Host Kinases to Inhibit Type III Effector-Triggered Activation of the Pyrin Inflammasome.
  Journal
Cell Host Microbe 20:296-306 (2016)
DOI:10.1016/j.chom.2016.07.018
Reference
  Authors
Schotte P, Denecker G, Van Den Broeke A, Vandenabeele P, Cornelis GR, Beyaert R
  Title
Targeting Rac1 by the Yersinia effector protein YopE inhibits caspase-1-mediated maturation and release of interleukin-1beta.
  Journal
J Biol Chem 279:25134-42 (2004)
DOI:10.1074/jbc.M401245200
Reference
  Authors
Orth K, Palmer LE, Bao ZQ, Stewart S, Rudolph AE, Bliska JB, Dixon JE
  Title
Inhibition of the mitogen-activated protein kinase kinase superfamily by a Yersinia effector.
  Journal
Science 285:1920-3 (1999)
DOI:10.1126/science.285.5435.1920
Reference
  Authors
Zhou H, Monack DM, Kayagaki N, Wertz I, Yin J, Wolf B, Dixit VM
  Title
Yersinia virulence factor YopJ acts as a deubiquitinase to inhibit NF-kappa B activation.
  Journal
J Exp Med 202:1327-32 (2005)
DOI:10.1084/jem.20051194
Reference
  Authors
Haase R, Richter K, Pfaffinger G, Courtois G, Ruckdeschel K
  Title
Yersinia outer protein P suppresses TGF-beta-activated kinase-1 activity to impair innate immune signaling in Yersinia enterocolitica-infected cells.
  Journal
J Immunol 175:8209-17 (2005)
DOI:10.4049/jimmunol.175.12.8209
Reference
  Authors
Thiefes A, Wolf A, Doerrie A, Grassl GA, Matsumoto K, Autenrieth I, Bohn E, Sakurai H, Niedenthal R, Resch K, Kracht M
  Title
The Yersinia enterocolitica effector YopP inhibits host cell signalling by inactivating the protein kinase TAK1 in the IL-1 signalling pathway.
  Journal
EMBO Rep 7:838-44 (2006)
DOI:10.1038/sj.embor.7400754
Reference
  Authors
Rosadini CV, Zanoni I, Odendall C, Green ER, Paczosa MK, Philip NH, Brodsky IE, Mecsas J, Kagan JC
  Title
A Single Bacterial Immune Evasion Strategy Dismantles Both MyD88 and TRIF Signaling Pathways Downstream of TLR4.
  Journal
Cell Host Microbe 18:682-93 (2015)
DOI:10.1016/j.chom.2015.11.006
Reference
  Authors
Rolan HG, Durand EA, Mecsas J
  Title
Identifying Yersinia YopH-targeted signal transduction pathways that impair neutrophil responses during in vivo murine infection.
  Journal
Cell Host Microbe 14:306-17 (2013)
DOI:10.1016/j.chom.2013.08.013
Reference
  Authors
Alonso A, Bottini N, Bruckner S, Rahmouni S, Williams S, Schoenberger SP, Mustelin T
  Title
Lck dephosphorylation at Tyr-394 and inhibition of T cell antigen receptor signaling by Yersinia phosphatase YopH.
  Journal
J Biol Chem 279:4922-8 (2004)
DOI:10.1074/jbc.M308978200
Related
pathway
tmu04510  Focal adhesion
tmu04620  Toll-like receptor signaling pathway
tmu04621  NOD-like receptor signaling pathway
tmu04660  T cell receptor signaling pathway
tmu04666  Fc gamma R-mediated phagocytosis
tmu04810  Regulation of actin cytoskeleton
KO pathway
ko05135   
LinkDB

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