KEGG   PATHWAY: oor04620
Entry
oor04620                    Pathway                                
Name
Toll-like receptor signaling pathway - Orcinus orca (killer whale)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
oor04620  Toll-like receptor signaling pathway
oor04620

Organism
Orcinus orca (killer whale) [GN:oor]
Gene
101269212  MAPK13; mitogen-activated protein kinase 13 isoform X7 [KO:K04441] [EC:2.7.11.24]
101269458  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
101269575  MAP3K8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
101269870  TNF; tumor necrosis factor [KO:K03156]
101270188  CTSK; cathepsin K isoform X3 [KO:K01371] [EC:3.4.22.38]
101270190  SPP1; osteopontin isoform X1 [KO:K06250]
101270342  RELA; transcription factor p65 isoform X1 [KO:K04735]
101270607  MAP2K4; dual specificity mitogen-activated protein kinase kinase 4 isoform X1 [KO:K04430] [EC:2.7.12.2]
101271021  TLR5; toll-like receptor 5 [KO:K10168]
101271374  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
101272095  AKT2; RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
101272168  IRF3; interferon regulatory factor 3 [KO:K05411]
101272428  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
101272458  STAT1; signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220]
101272815  IRF9; interferon regulatory factor 9 isoform X1 [KO:K04693]
101272835  IL12B; interleukin-12 subunit beta [KO:K05425]
101272962  FADD; FAS-associated death domain protein isoform X1 [KO:K02373]
101273287  MAPK1; mitogen-activated protein kinase 1 isoform X1 [KO:K04371] [EC:2.7.11.24]
101273316  AKT1; RAC-alpha serine/threonine-protein kinase isoform X2 [KO:K04456] [EC:2.7.11.1]
101273673  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X4 [KO:K07211] [EC:2.7.11.10]
101273776  [KO:K12499]
101274018  RAC1; ras-related C3 botulinum toxin substrate 1 isoform X3 [KO:K04392]
101274027  [KO:K05408]
101274041  [KO:K05414]
101274262  [KO:K12964]
101274544  CXCL11; C-X-C motif chemokine 11 [KO:K12672]
101275016  [KO:K05414]
101275275  [KO:K05414]
101275383  JAK1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
101275666  MAP2K3; dual specificity mitogen-activated protein kinase kinase 3 isoform X2 [KO:K04432] [EC:2.7.12.2]
101276053  TLR2; toll-like receptor 2 [KO:K10159]
101276514  IRF5; interferon regulatory factor 5 isoform X1 [KO:K09446]
101277458  IRF7; interferon regulatory factor 7 isoform X1 [KO:K09447]
101277553  TRAF6; TNF receptor-associated factor 6 isoform X1 [KO:K03175] [EC:2.3.2.27]
101277568  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
101277656  MAPK10; mitogen-activated protein kinase 10 isoform X4 [KO:K04440] [EC:2.7.11.24]
101277992  LBP; lipopolysaccharide-binding protein isoform X2 [KO:K05399]
101278075  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
101278129  CXCL8; interleukin-8 [KO:K10030]
101278346  TYK2; non-receptor tyrosine-protein kinase TYK2 isoform X2 [KO:K11219] [EC:2.7.10.2]
101278425  MYD88; myeloid differentiation primary response protein MyD88 isoform X1 [KO:K04729]
101278583  TLR3; toll-like receptor 3 [KO:K05401]
101278974  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X2 [KO:K00922] [EC:2.7.1.153]
101278975  CD40; tumor necrosis factor receptor superfamily member 5 isoform X2 [KO:K03160]
101279088  IL12A; interleukin-12 subunit alpha [KO:K05406]
101279857  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
101280413  MAP2K6; dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
101280548  TLR1; toll-like receptor 1 [KO:K05398]
101280639  IRAK1; interleukin-1 receptor-associated kinase 1 isoform X2 [KO:K04730] [EC:2.7.11.1]
101280678  CD80; T-lymphocyte activation antigen CD80 isoform X1 [KO:K05412]
101281072  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
101281228  MAPK8; mitogen-activated protein kinase 8 isoform X2 [KO:K04440] [EC:2.7.11.24]
101281352  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta isoform X2 [KO:K02649]
101281428  TOLLIP; toll-interacting protein isoform X2 [KO:K05402]
101281591  STAT2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221]
101281780  CASP8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
101281783  IL6; LOW QUALITY PROTEIN: interleukin-6 [KO:K05405]
101282217  TLR4; toll-like receptor 4 isoform X1 [KO:K10160]
101282675  TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2 [KO:K04403]
101283011  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
101283229  [KO:K05408]
101283238  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
101283498  [KO:K05408]
101283534  CD14; monocyte differentiation antigen CD14 [KO:K04391]
101283958  IFNAR2; interferon alpha/beta receptor 2 isoform X1 [KO:K05131]
101283961  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
101284215  IFNAR1; interferon alpha/beta receptor 1 [KO:K05130]
101284365  TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404]
101284698  TIRAP; toll/interleukin-1 receptor domain-containing adapter protein [KO:K05403]
101284892  IL1B; interleukin-1 beta isoform X2 [KO:K04519]
101285437  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
101285763  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
101286388  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
101286650  FOS; protein c-Fos [KO:K04379]
101287162  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 isoform X1 [KO:K04369] [EC:2.7.12.2]
101287353  TLR7; toll-like receptor 7 isoform X1 [KO:K05404]
101287367  [KO:K05414]
101287579  [KO:K04441] [EC:2.7.11.24]
101287601  TLR8; toll-like receptor 8 [KO:K10170]
101287701  MAPK9; mitogen-activated protein kinase 9 isoform X5 [KO:K04440] [EC:2.7.11.24]
101287833  [KO:K04441] [EC:2.7.11.24]
101288079  MAP2K7; dual specificity mitogen-activated protein kinase kinase 7 isoform X3 [KO:K04431] [EC:2.7.12.2]
101288103  AKT3; RAC-gamma serine/threonine-protein kinase isoform X2 [KO:K04456] [EC:2.7.11.1]
101288184  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
101288913  JUN; transcription factor Jun [KO:K04448]
101289058  IFNB1; interferon beta [KO:K05415]
101289099  CD86; T-lymphocyte activation antigen CD86 isoform X5 [KO:K05413]
101289148  [KO:K10161]
101289273  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
101289394  MAPK3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
101289477  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
101289508  CXCL9; C-X-C motif chemokine 9 isoform X1 [KO:K05416]
101289671  LY96; lymphocyte antigen 96 isoform X2 [KO:K05400]
101289751  RIPK1; receptor-interacting serine/threonine-protein kinase 1 isoform X2 [KO:K02861] [EC:2.7.11.1]
101290315  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
105747698  TICAM2; TIR domain-containing adapter molecule 2 [KO:K05409]
125960249  TLR6; toll-like receptor 6 [KO:K10169]
125964698  [KO:K05414]
125964699  [KO:K05414]
125964701  [KO:K05414]
125964702  [KO:K05414]
125964703  [KO:K05414]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
oor04010  MAPK signaling pathway
oor04060  Cytokine-cytokine receptor interaction
oor04064  NF-kappa B signaling pathway
oor04120  Ubiquitin mediated proteolysis
oor04151  PI3K-Akt signaling pathway
oor04210  Apoptosis
oor04610  Complement and coagulation cascades
oor04630  JAK-STAT signaling pathway
KO pathway
ko04620   

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