KEGG   PATHWAY: bom04620
Entry
bom04620                    Pathway                                
Name
Toll-like receptor signaling pathway - Bos mutus (wild yak)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
bom04620  Toll-like receptor signaling pathway
bom04620

Organism
Bos mutus (wild yak) [GN:bom]
Gene
102264358  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
102264638  CXCL9; C-X-C motif chemokine 9 [KO:K05416]
102264816  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
102264969  CCL5; C-C motif chemokine 5 [KO:K12499]
102265267  IRF5; interferon regulatory factor 5 [KO:K09446]
102265427  AKT3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
102266354  [KO:K05414]
102266371  [KO:K05399]
102266466  [KO:K05414]
102266518  LY96; lymphocyte antigen 96 isoform X1 [KO:K05400]
102266863  TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403]
102266922  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
102266960  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
102267762  [KO:K05414]
102267773  MAP2K3; dual specificity mitogen-activated protein kinase kinase 3 [KO:K04432] [EC:2.7.12.2]
102267895  JUN; transcription factor Jun [KO:K04448]
102268124  CXCL8; interleukin-8 [KO:K10030]
102268417  RELA; transcription factor p65 [KO:K04735]
102268437  TLR3; toll-like receptor 3 isoform X2 [KO:K05401]
102268835  TLR2; toll-like receptor 2 [KO:K10159]
102269461  CXCL11; C-X-C motif chemokine 11 isoform X1 [KO:K12672]
102270488  CD14; monocyte differentiation antigen CD14 isoform X1 [KO:K04391]
102270981  [KO:K05414]
102271030  MAPK13; mitogen-activated protein kinase 13 isoform X1 [KO:K04441] [EC:2.7.11.24]
102271320  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
102271506  IKBKE; LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
102271710  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 isoform X2 [KO:K04369] [EC:2.7.12.2]
102271962  FADD; FAS-associated death domain protein [KO:K02373]
102272088  TOLLIP; toll-interacting protein [KO:K05402]
102272192  [KO:K05408]
102272368  MAPK3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
102272402  TLR5; toll-like receptor 5 isoform X1 [KO:K10168]
102272421  MAPK10; mitogen-activated protein kinase 10 [KO:K04440] [EC:2.7.11.24]
102272602  CASP8; caspase-8 [KO:K04398] [EC:3.4.22.61]
102272638  MAP2K7; dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
102272762  [KO:K05408]
102272962  MAP2K6; dual specificity mitogen-activated protein kinase kinase 6 isoform X3 [KO:K04433] [EC:2.7.12.2]
102273253  RAC1; ras-related C3 botulinum toxin substrate 1 isoform X1 [KO:K04392]
102274031  IRF9; interferon regulatory factor 9 isoform X1 [KO:K04693]
102274192  CD40; tumor necrosis factor receptor superfamily member 5 isoform X2 [KO:K03160]
102274461  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
102274553  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
102274580  SPP1; osteopontin [KO:K06250]
102275053  FOS; protein c-Fos [KO:K04379]
102275218  IFNAR2; interferon alpha/beta receptor 2 isoform X1 [KO:K05131]
102275402  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
102275701  CD86; T-lymphocyte activation antigen CD86 isoform X1 [KO:K05413]
102275793  IFNAR1; interferon alpha/beta receptor 1 [KO:K05130]
102275978  IRF7; interferon regulatory factor 7 [KO:K09447]
102276392  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
102276398  IL12A; interleukin-12 subunit alpha [KO:K05406]
102277340  CD80; T-lymphocyte activation antigen CD80 isoform X1 [KO:K05412]
102277548  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
102277710  STAT2; signal transducer and activator of transcription 2 isoform X2 [KO:K11221]
102277837  IRAK1; interleukin-1 receptor-associated kinase 1 isoform X1 [KO:K04730] [EC:2.7.11.1]
102277911  TNF; tumor necrosis factor isoform X1 [KO:K03156]
102277976  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
102278504  TIRAP; toll/interleukin-1 receptor domain-containing adapter protein [KO:K05403]
102278516  TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404]
102278856  MAP3K8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
102279479  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
102279593  IRF3; interferon regulatory factor 3 [KO:K05411]
102279783  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
102279944  MYD88; myeloid differentiation primary response protein MyD88 isoform X1 [KO:K04729]
102280296  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
102280458  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
102280497  [KO:K05415]
102280670  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 isoform X1 [KO:K04368] [EC:2.7.12.2]
102281065  [KO:K05415]
102281443  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
102281602  TLR7; toll-like receptor 7 isoform X1 [KO:K05404]
102281707  LBP; lipopolysaccharide-binding protein isoform X1 [KO:K05399]
102281714  TLR1; toll-like receptor 1 [KO:K05398]
102281878  TLR8; toll-like receptor 8 isoform X2 [KO:K10170]
102281886  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
102281998  TLR6; LOW QUALITY PROTEIN: toll-like receptor 6 [KO:K10169]
102282466  [KO:K05415]
102282890  IL1B; interleukin-1 beta [KO:K04519]
102283212  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
102283508  STAT1; signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220]
102283689  IL12B; interleukin-12 subunit beta [KO:K05425]
102284148  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
102284581  [KO:K05415]
102284931  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
102285417  [KO:K05414]
102285459  [KO:K05414]
102285848  MAPK12; LOW QUALITY PROTEIN: mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
102285891  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
102286137  JAK1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
102286868  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
102286969  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
102287266  TYK2; non-receptor tyrosine-protein kinase TYK2 isoform X1 [KO:K11219] [EC:2.7.10.2]
102287278  MAP2K4; dual specificity mitogen-activated protein kinase kinase 4 isoform X1 [KO:K04430] [EC:2.7.12.2]
102287335  [KO:K12964]
102287625  [KO:K05408]
102287709  CTSK; cathepsin K [KO:K01371] [EC:3.4.22.38]
102287919  IL6; interleukin-6 [KO:K05405]
102287968  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
102288174  TLR4; LOW QUALITY PROTEIN: toll-like receptor 4 [KO:K10160]
106700928  TLR9; toll-like receptor 9 [KO:K10161]
106701244  MAPK11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
138988315  [KO:K10030]
138988994  [KO:K05414]
138992036  [KO:K05408]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
bom04010  MAPK signaling pathway
bom04060  Cytokine-cytokine receptor interaction
bom04064  NF-kappa B signaling pathway
bom04120  Ubiquitin mediated proteolysis
bom04151  PI3K-Akt signaling pathway
bom04210  Apoptosis
bom04610  Complement and coagulation cascades
bom04630  JAK-STAT signaling pathway
KO pathway
ko04620   

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