KEGG   PATHWAY: shr04217
Entry
shr04217                    Pathway                                
Name
Necroptosis - Sarcophilus harrisii (Tasmanian devil)
Description
Necroptosis is a programmed form of necrosis. It can be initiated by different stimuli, such as tumor necrosis factor (TNF), TNF-related apoptosis-inducing ligand (TRAIL), Fas ligand (FasL), interferon (IFN), LPS, viral DNA or RNA, DNA-damage agent and requires the kinase activity of receptor-interacting protein 1 (RIPK1) and RIPK3. Its execution involves ROS generation, calcium overload, the opening of the mitochondrial permeability transition pore, mitochondrial fission, inflammatory response and chromatinolysis. Necroptosis participates in many pathogenesis of diseases, including neurological diseases, retinal disorders, acute kidney injury, inflammatory diseases and microbial infections.
Class
Cellular Processes; Cell growth and death
Pathway map
shr04217  Necroptosis
shr04217

Organism
Sarcophilus harrisii (Tasmanian devil) [GN:shr]
Gene
100921875  TNF; tumor necrosis factor [KO:K03156]
100919788  TNFRSF1A; tumor necrosis factor receptor superfamily member 1A [KO:K03158]
116421331  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
100934749  TRAF2; TNF receptor-associated factor 2 isoform X1 [KO:K03173] [EC:2.3.2.27]
100926831  TRAF5; TNF receptor-associated factor 5 isoform X2 [KO:K09849]
100914177  RIPK1; receptor-interacting serine/threonine-protein kinase 1 isoform X1 [KO:K02861] [EC:2.7.11.1]
100914028  baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060]
100933131  baculoviral IAP repeat-containing protein 3 isoform X1 [KO:K16060]
100928240  XIAP; E3 ubiquitin-protein ligase XIAP [KO:K04725] [EC:2.3.2.27]
100919033  RBCK1; ranBP-type and C3HC4-type zinc finger-containing protein 1 [KO:K10630] [EC:2.3.2.31]
100915026  RNF31; E3 ubiquitin-protein ligase RNF31 [KO:K11974] [EC:2.3.2.31]
100923314  sharpin [KO:K20894]
100918174  SPATA2L; spermatogenesis-associated protein 2-like protein [KO:K17595]
100921295  SPATA2; spermatogenesis-associated protein 2 [KO:K17595]
105749106  spermatogenesis-associated protein 2 [KO:K17595]
100931361  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
100925732  FADD; FAS-associated death domain protein [KO:K02373]
100931580  CASP8; caspase-8 [KO:K04398] [EC:3.4.22.61]
100927927  CFLAR; CASP8 and FADD-like apoptosis regulator [KO:K04724]
100917667  cytochrome b-245 heavy chain [KO:K21421] [EC:1.-.-.-]
100934917  CAMK2A; calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1 [KO:K04515] [EC:2.7.11.17]
100916233  CAMK2G; calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X1 [KO:K04515] [EC:2.7.11.17]
100913975  CAMK2D; calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1 [KO:K04515] [EC:2.7.11.17]
100918427  CAMK2B; calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1 [KO:K04515] [EC:2.7.11.17]
100920060  SLC25A4; ADP/ATP translocase 1 [KO:K05863]
100929945  SLC25A31; ADP/ATP translocase 4 [KO:K05863]
116422319  SLC25A6; ADP/ATP translocase 3 [KO:K05863]
100927813  VDAC1; voltage-dependent anion-selective channel protein 1 [KO:K05862]
100920408  VDAC2; voltage-dependent anion-selective channel protein 2 [KO:K15040]
100923123  VDAC3; voltage-dependent anion-selective channel protein 3 isoform X2 [KO:K15041]
100923987  GLUD1; glutamate dehydrogenase 1, mitochondrial isoform X1 [KO:K00261] [EC:1.4.1.3]
100930718  GLUL; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
100934831  PYGB; glycogen phosphorylase, brain form [KO:K00688] [EC:2.4.1.1]
100927566  PYGL; glycogen phosphorylase, liver form [KO:K00688] [EC:2.4.1.1]
100915891  PYGM; glycogen phosphorylase, muscle form [KO:K00688] [EC:2.4.1.1]
100930815  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
100928480  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
100924267  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
100921504  FTHL17; ferritin heavy polypeptide-like 17 [KO:K00522] [EC:1.16.3.1]
116419734  FTH1; ferritin heavy chain [KO:K00522] [EC:1.16.3.1]
105749379  ferritin light chain, oocyte isoform-like [KO:K00522] [EC:1.16.3.1]
100920556  FTL; ferritin light chain [KO:K13625]
100927268  PLA2G4A; cytosolic phospholipase A2 isoform X1 [KO:K16342] [EC:3.1.1.4]
100913647  PLA2G4E; cytosolic phospholipase A2 epsilon [KO:K16342] [EC:3.1.1.4]
100927005  PLA2G4C; cytosolic phospholipase A2 gamma isoform X1 [KO:K16342] [EC:3.1.1.4]
100914602  PLA2G4B; cytosolic phospholipase A2 beta [KO:K16342] [EC:3.1.1.4]
100917893  PLA2G4D; cytosolic phospholipase A2 delta [KO:K16342] [EC:3.1.1.4]
100918158  PLA2G4F; cytosolic phospholipase A2 zeta isoform X1 [KO:K16342] [EC:3.1.1.4]
100927376  CAPN1; calpain-1 catalytic subunit isoform X1 [KO:K01367] [EC:3.4.22.52]
100922649  CAPN2; calpain-2 catalytic subunit [KO:K03853] [EC:3.4.22.53]
100916633  SMPD1; sphingomyelin phosphodiesterase [KO:K12350] [EC:3.1.4.12]
100930759  PGAM5; serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1 [KO:K15637] [EC:3.1.3.16]
100928220  DNM1L; dynamin-1-like protein isoform X1 [KO:K17065] [EC:3.6.5.5]
100925851  PYCARD; apoptosis-associated speck-like protein containing a CARD [KO:K12799]
105749479  PYDC1; pyrin domain-containing protein 1 [KO:K12799]
100935043  caspase-1 isoform X1 [KO:K01370] [EC:3.4.22.36]
100922350  IL1B; interleukin-1 beta [KO:K04519]
100926829  CHMP2A; charged multivesicular body protein 2a [KO:K12191]
100928373  CHMP2B; charged multivesicular body protein 2b isoform X1 [KO:K12192]
100933274  CHMP3; charged multivesicular body protein 3 [KO:K12193]
100913726  CHMP4B; charged multivesicular body protein 4b [KO:K12194]
100915284  CHMP4A; charged multivesicular body protein 4a isoform X1 [KO:K12194]
100919831  CHMP4C; charged multivesicular body protein 4c [KO:K24782]
105750363  CHMP6; charged multivesicular body protein 6 [KO:K12195]
100921038  VPS4A; vacuolar protein sorting-associated protein 4A [KO:K12196]
100934931  VPS4B; vacuolar protein sorting-associated protein 4B isoform X2 [KO:K12196]
100917646  CHMP1A; charged multivesicular body protein 1a [KO:K12197]
100921191  charged multivesicular body protein 1b [KO:K12197]
100915119  charged multivesicular body protein 1b-2 [KO:K12197]
100928434  CHMP5; charged multivesicular body protein 5 [KO:K12198]
100917472  CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053]
100934039  TRPM7; transient receptor potential cation channel subfamily M member 7 [KO:K04982] [EC:2.7.11.1]
105749132  IL1A; interleukin-1 alpha [KO:K04383]
105749716  IL33; interleukin-33 [KO:K12967]
100932515  HMGB1; high mobility group protein B1 [KO:K10802]
105750042  TNFSF10; tumor necrosis factor ligand superfamily member 10 [KO:K04721]
105749071  tumor necrosis factor receptor superfamily member 10A isoform X1 [KO:K04722]
100919776  FASLG; tumor necrosis factor ligand superfamily member 6 isoform X1 [KO:K04389]
105749219  FAS; tumor necrosis factor receptor superfamily member 6 [KO:K04390]
100914965  interferon tau-like [KO:K05414]
100920968  interferon tau-2-like [KO:K05414]
100914703  interferon tau-2-like [KO:K05414]
116420987  interferon omega-1-like [KO:K05414]
116420989  interferon omega-1-like [KO:K05414]
100914443  interferon beta [KO:K05415]
105750683  IFNG; interferon gamma [KO:K04687]
100919064  IFNAR1; LOW QUALITY PROTEIN: interferon alpha/beta receptor 1 [KO:K05130]
105750087  IFNAR2; interferon alpha/beta receptor 2 isoform X1 [KO:K05131]
111720994  IFNGR1; interferon gamma receptor 1 [KO:K05132]
100929576  IFNGR2; interferon gamma receptor 2 [KO:K05133]
100916991  JAK1; tyrosine-protein kinase JAK1 isoform X1 [KO:K11217] [EC:2.7.10.2]
100927237  JAK2; tyrosine-protein kinase JAK2 isoform X1 [KO:K04447] [EC:2.7.10.2]
100920108  JAK3; tyrosine-protein kinase JAK3 [KO:K11218] [EC:2.7.10.2]
100927743  TYK2; non-receptor tyrosine-protein kinase TYK2 isoform X1 [KO:K11219] [EC:2.7.10.2]
105749862  STAT1; signal transducer and activator of transcription 1-alpha/beta [KO:K11220]
100933167  STAT2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221]
100933581  STAT3; signal transducer and activator of transcription 3 isoform X1 [KO:K04692]
100933645  STAT4; signal transducer and activator of transcription 4 [KO:K11222]
100920045  LOW QUALITY PROTEIN: signal transducer and activator of transcription 5A [KO:K11223]
100920307  STAT5B; signal transducer and activator of transcription 5B [KO:K11224]
100930901  STAT6; signal transducer and activator of transcription 6 isoform X1 [KO:K11225]
100916853  IRF9; interferon regulatory factor 9 isoform X3 [KO:K04693]
100931721  EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 [KO:K16195] [EC:2.7.11.1]
100927125  TLR4; toll-like receptor 4 [KO:K10160]
105749707  TICAM2; TIR domain-containing adapter molecule 2 [KO:K05409]
100921575  TICAM1; TIR domain-containing adapter molecule 1 isoform X1 [KO:K05842]
100922218  USP21; ubiquitin carboxyl-terminal hydrolase 21 isoform X1 [KO:K21634] [EC:3.4.19.12]
100924705  SQSTM1; sequestosome-1 isoform X1 [KO:K14381]
100928900  HSP90AB1; heat shock protein HSP 90-beta [KO:K04079]
100929957  HSP90AA1; heat shock protein HSP 90-alpha [KO:K04079]
100919524  TNFAIP3; tumor necrosis factor alpha-induced protein 3 isoform X2 [KO:K11859] [EC:3.4.19.12]
100933419  PARP1; poly [ADP-ribose] polymerase 1 [KO:K24070] [EC:2.4.2.30]
100929676  BID; BH3-interacting domain death agonist [KO:K04726]
100919198  AIFM1; apoptosis-inducing factor 1, mitochondrial [KO:K04727] [EC:1.-.-.-]
100924346  core histone macro-H2A.1 isoform X1 [KO:K11251]
100933193  histone H2A.V isoform X1 [KO:K11251]
100927088  histone H2A type 3 [KO:K11251]
100915930  histone H2AX [KO:K11251]
100924763  histone H2A type 1-F-like [KO:K11251]
100922659  histone H2A type 3 [KO:K11251]
100934889  histone H2A type 2-A [KO:K11251]
100917453  core histone macro-H2A.2 [KO:K11251]
100924731  histone H2A-beta, sperm-like [KO:K11251]
100929420  histone H2A type 3 [KO:K11251]
100918923  histone H2A.Z isoform X1 [KO:K11251]
100924202  histone H2A.J-like [KO:K11251]
100924990  histone H2A-beta, sperm-like [KO:K11251]
100924828  histone H2A-beta, sperm-like [KO:K11251]
100914215  histone H2A type 2-B [KO:K11251]
100928381  histone H2A type 1 [KO:K11251]
100929929  histone H2A type 1 [KO:K11251]
100932528  histone H2A type 1-D [KO:K11251]
116423223  histone H2A type 3 [KO:K11251]
100919205  PPIA; peptidyl-prolyl cis-trans isomerase A isoform X1 [KO:K03767] [EC:5.2.1.8]
100934666  BCL2; apoptosis regulator Bcl-2 [KO:K02161]
Compound
C00002  ATP
C00027  Hydrogen peroxide
C00076  Calcium cation
C00195  N-Acylsphingosine
C00219  Arachidonate
C00305  Magnesium cation
C00319  Sphingosine
C00550  Sphingomyelin
C14592  N-Methyl-N'-nitro-N-nitrosoguanidine
C16844  Hydroxyl radical
Reference
  Authors
Vandenabeele P, Galluzzi L, Vanden Berghe T, Kroemer G
  Title
Molecular mechanisms of necroptosis: an ordered cellular explosion.
  Journal
Nat Rev Mol Cell Biol 11:700-14 (2010)
DOI:10.1038/nrm2970
Reference
  Authors
Brenner D, Blaser H, Mak TW
  Title
Regulation of tumour necrosis factor signalling: live or let die.
  Journal
Nat Rev Immunol 15:362-74 (2015)
DOI:10.1038/nri3834
Reference
  Authors
Conrad M, Angeli JP, Vandenabeele P, Stockwell BR
  Title
Regulated necrosis: disease relevance and therapeutic opportunities.
  Journal
Nat Rev Drug Discov 15:348-66 (2016)
DOI:10.1038/nrd.2015.6
Reference
  Authors
Ofengeim D, Yuan J
  Title
Regulation of RIP1 kinase signalling at the crossroads of inflammation and cell death.
  Journal
Nat Rev Mol Cell Biol 14:727-36 (2013)
DOI:10.1038/nrm3683
Reference
  Authors
Murphy JM, Vince JE
  Title
Post-translational control of RIPK3 and MLKL mediated necroptotic cell death.
  Journal
F1000Res 4:F1000 Faculty Rev-1297 (2015)
DOI:10.12688/f1000research.7046.1
Reference
  Authors
Vanden Berghe T, Linkermann A, Jouan-Lanhouet S, Walczak H, Vandenabeele P
  Title
Regulated necrosis: the expanding network of non-apoptotic cell death pathways.
  Journal
Nat Rev Mol Cell Biol 15:135-47 (2014)
DOI:10.1038/nrm3737
Reference
  Authors
Dondelinger Y, Hulpiau P, Saeys Y, Bertrand MJ, Vandenabeele P
  Title
An evolutionary perspective on the necroptotic pathway.
  Journal
Trends Cell Biol 26:721-32 (2016)
DOI:10.1016/j.tcb.2016.06.004
Reference
  Authors
Thapa RJ, Ingram JP, Ragan KB, Nogusa S, Boyd DF, Benitez AA, Sridharan H, Kosoff R, Shubina M, Landsteiner VJ, Andrake M, Vogel P, Sigal LJ, tenOever BR, Thomas PG, Upton JW, Balachandran S
  Title
DAI Senses Influenza A Virus Genomic RNA and Activates RIPK3-Dependent Cell Death.
  Journal
Cell Host Microbe 20:674-681 (2016)
DOI:10.1016/j.chom.2016.09.014
Reference
  Authors
Yuan J, Najafov A, Py BF
  Title
Roles of Caspases in Necrotic Cell Death.
  Journal
Cell 167:1693-1704 (2016)
DOI:10.1016/j.cell.2016.11.047
Reference
  Authors
Jorgensen I, Rayamajhi M, Miao EA
  Title
Programmed cell death as a defence against infection.
  Journal
Nat Rev Immunol 17:151-164 (2017)
DOI:10.1038/nri.2016.147
Reference
  Authors
Vandenabeele P, Declercq W, Van Herreweghe F, Vanden Berghe T
  Title
The role of the kinases RIP1 and RIP3 in TNF-induced necrosis.
  Journal
Sci Signal 3:re4 (2010)
DOI:10.1126/scisignal.3115re4
Reference
  Authors
Vanlangenakker N, Vanden Berghe T, Vandenabeele P
  Title
Many stimuli pull the necrotic trigger, an overview.
  Journal
Cell Death Differ 19:75-86 (2012)
DOI:10.1038/cdd.2011.164
Reference
  Authors
Moriwaki K, Chan FK
  Title
RIP3: a molecular switch for necrosis and inflammation.
  Journal
Genes Dev 27:1640-9 (2013)
DOI:10.1101/gad.223321.113
Reference
  Authors
Humphries F, Yang S, Wang B, Moynagh PN
  Title
RIP kinases: key decision makers in cell death and innate immunity.
  Journal
Cell Death Differ 22:225-36 (2015)
DOI:10.1038/cdd.2014.126
Reference
  Authors
Wegner KW, Saleh D, Degterev A
  Title
Complex Pathologic Roles of RIPK1 and RIPK3: Moving Beyond Necroptosis.
  Journal
Trends Pharmacol Sci 38:202-225 (2017)
DOI:10.1016/j.tips.2016.12.005
Reference
  Authors
Kupka S, De Miguel D, Draber P, Martino L, Surinova S, Rittinger K, Walczak H
  Title
SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.
  Journal
Cell Rep 16:2271-80 (2016)
DOI:10.1016/j.celrep.2016.07.086
Reference
  Authors
Goodall ML, Fitzwalter BE, Zahedi S, Wu M, Rodriguez D, Mulcahy-Levy JM, Green DR, Morgan M, Cramer SD, Thorburn A
  Title
The Autophagy Machinery Controls Cell Death Switching between Apoptosis and Necroptosis.
  Journal
Dev Cell 37:337-49 (2016)
DOI:10.1016/j.devcel.2016.04.018
Reference
  Authors
Xu G, Tan X, Wang H, Sun W, Shi Y, Burlingame S, Gu X, Cao G, Zhang T, Qin J, Yang J
  Title
Ubiquitin-specific peptidase 21 inhibits tumor necrosis factor alpha-induced nuclear factor kappaB activation via binding to and deubiquitinating receptor-interacting protein 1.
  Journal
J Biol Chem 285:969-78 (2010)
DOI:10.1074/jbc.M109.042689
Reference
  Authors
Jacobsen AV, Silke J
  Title
The importance of being chaperoned: HSP90 and necroptosis.
  Journal
Cell Chem Biol 23:205-7 (2016)
DOI:10.1016/j.chembiol.2016.02.003
Reference
  Authors
Gurung P, Man SM, Kanneganti TD
  Title
A20 is a regulator of necroptosis.
  Journal
Nat Immunol 16:596-7 (2015)
DOI:10.1038/ni.3174
Reference
  Authors
Feng N, Anderson ME
  Title
CaMKII is a nodal signal for multiple programmed cell death pathways in heart.
  Journal
J Mol Cell Cardiol 103:102-109 (2017)
DOI:10.1016/j.yjmcc.2016.12.007
Reference
  Authors
Zhivotovsky B, Galluzzi L, Kepp O, Kroemer G
  Title
Adenine nucleotide translocase: a component of the phylogenetically conserved cell death machinery.
  Journal
Cell Death Differ 16:1419-25 (2009)
DOI:10.1038/cdd.2009.118
Reference
  Authors
Thapa RJ, Nogusa S, Chen P, Maki JL, Lerro A, Andrake M, Rall GF, Degterev A, Balachandran S
  Title
Interferon-induced RIP1/RIP3-mediated necrosis requires PKR and is licensed by FADD and caspases.
  Journal
Proc Natl Acad Sci U S A 110:E3109-18 (2013)
DOI:10.1073/pnas.1301218110
Reference
  Authors
Thapa RJ, Basagoudanavar SH, Nogusa S, Irrinki K, Mallilankaraman K, Slifker MJ, Beg AA, Madesh M, Balachandran S
  Title
NF-kappaB protects cells from gamma interferon-induced RIP1-dependent necroptosis.
  Journal
Mol Cell Biol 31:2934-46 (2011)
DOI:10.1128/MCB.05445-11
Reference
  Authors
Sridharan H, Upton JW
  Title
Programmed necrosis in microbial pathogenesis.
  Journal
Trends Microbiol 22:199-207 (2014)
DOI:10.1016/j.tim.2014.01.005
Reference
  Authors
Cabon L, Galan-Malo P, Bouharrour A, Delavallee L, Brunelle-Navas MN, Lorenzo HK, Gross A, Susin SA
  Title
BID regulates AIF-mediated caspase-independent necroptosis by promoting BAX activation.
  Journal
Cell Death Differ 19:245-56 (2012)
DOI:10.1038/cdd.2011.91
Reference
  Authors
Baritaud M, Boujrad H, Lorenzo HK, Krantic S, Susin SA
  Title
Histone H2AX: The missing link in AIF-mediated caspase-independent programmed necrosis.
  Journal
Cell Cycle 9:3166-73 (2010)
DOI:10.4161/cc.9.16.12887
Reference
  Authors
Upton JW, Kaiser WJ
  Title
DAI Another Way: Necroptotic Control of Viral Infection.
  Journal
Cell Host Microbe 21:290-293 (2017)
DOI:10.1016/j.chom.2017.01.016
Reference
  Authors
Silke J, Rickard JA, Gerlic M
  Title
The diverse role of RIP kinases in necroptosis and inflammation.
  Journal
Nat Immunol 16:689-97 (2015)
DOI:10.1038/ni.3206
Reference
  Authors
Guo H, Kaiser WJ
  Title
ESCRTing Necroptosis.
  Journal
Cell 169:186-187 (2017)
DOI:10.1016/j.cell.2017.03.030
Reference
  Authors
Gong YN, Guy C, Olauson H, Becker JU, Yang M, Fitzgerald P, Linkermann A, Green DR
  Title
ESCRT-III Acts Downstream of MLKL to Regulate Necroptotic Cell Death and Its Consequences.
  Journal
Cell 169:286-300.e16 (2017)
DOI:10.1016/j.cell.2017.03.020
Reference
  Authors
Petrie EJ, Hildebrand JM, Murphy JM
  Title
Insane in the membrane: a structural perspective of MLKL function in necroptosis.
  Journal
Immunol Cell Biol 95:152-159 (2017)
DOI:10.1038/icb.2016.125
Reference
  Authors
Cai Z, Jitkaew S, Zhao J, Chiang HC, Choksi S, Liu J, Ward Y, Wu LG, Liu ZG
  Title
Plasma membrane translocation of trimerized MLKL protein is required for TNF-induced necroptosis.
  Journal
Nat Cell Biol 16:55-65 (2014)
DOI:10.1038/ncb2883
Reference
  Authors
Lawlor KE, Khan N, Mildenhall A, Gerlic M, Croker BA, D'Cruz AA, Hall C, Kaur Spall S, Anderton H, Masters SL, Rashidi M, Wicks IP, Alexander WS, Mitsuuchi Y, Benetatos CA, Condon SM, Wong WW, Silke J, Vaux DL, Vince JE
  Title
RIPK3 promotes cell death and NLRP3 inflammasome activation in the absence of MLKL.
  Journal
Nat Commun 6:6282 (2015)
DOI:10.1038/ncomms7282
Reference
  Authors
Shlomovitz I, Zargrian S, Gerlic M
  Title
Mechanisms of RIPK3-induced inflammation.
  Journal
Immunol Cell Biol 95:166-172 (2017)
DOI:10.1038/icb.2016.124
Related
pathway
shr00250  Alanine, aspartate and glutamate metabolism
shr04210  Apoptosis
shr04668  TNF signaling pathway
shr04922  Glucagon signaling pathway
KO pathway
ko04217   
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