SSDB Best Search Result

Entry:afw:Anae109_0939 (847 a.a.)
Name:DNA ligase D
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 211 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     2012     0.416      862     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910     1936     0.420      880     
ssy:SLG_04290 putative DNA ligase                       K01971     835     1931     0.425      848     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851     1919     0.402      839     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866     1912     0.403      854     
phe:Phep_1702 DNA ligase D                              K01971     877     1890     0.362      894     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884     1878     0.392      869     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901     1871     0.402      889     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882     1863     0.397      868     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829     1842     0.403      842     
rle:pRL120229 putative DNA ligase family protein        K01971     881     1827     0.383      904     
xau:Xaut_4365 DNA ligase D                              K01971     886     1823     0.390      911     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829     1821     0.400      840     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900     1821     0.380      920     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843     1821     0.405      843     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868     1805     0.388      892     
swi:Swit_3982 DNA ligase D                              K01971     837     1801     0.394      857     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865     1752     0.392      854     
sno:Snov_0819 DNA ligase D                              K01971     842     1748     0.381      847     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828     1742     0.395      861     
dsy:DSY0616 hypothetical protein                        K01971     818     1741     0.384      813     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892     1733     0.365      892     
ppu:PP_3260 DNA ligase D                                K01971     833     1728     0.377      854     
pae:PA2138 multifunctional non-homologous end joining p K01971     840     1712     0.383      864     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001     1680     0.352      1016    
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123     1634     0.390      847     
rpa:TX73_018915 DNA ligase D                            K01971     914     1633     0.367      909     
cpy:Cphy_1729 DNA ligase D                              K01971     813     1631     0.368      809     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872     1615     0.367      885     
xcc:XCC2307 ATP-dependent DNA ligase                    K01971     849     1611     0.367      866     
scl:sce3523 unnamed protein product; High confidence in K01971     762     1476     0.403      687     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742     1394     0.362      849     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159     1344     0.314      1175    
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670     1116     0.353      688     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899     1063     0.400      547     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647     1044     0.318      833     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      982     0.378      527     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      945     0.367      523     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      942     0.374      529     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      941     0.374      529     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      934     0.371      539     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      922     0.360      530     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      910     0.372      541     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      909     0.358      530     
msm:MSMEG_5570 DNA ligase                               K01971     755      893     0.344      538     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      880     0.351      533     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      856     0.357      535     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      841     0.295      616     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      840     0.299      638     
mta:Moth_2082 conserved hypothetical protein            K01971     306      813     0.444      293     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      807     0.466      311     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      788     0.296      611     
sco:SCO6498 conserved hypothetical protein SC1E6.07     K01971     319      758     0.434      309     
oih:OB3034 hypothetical conserved protein               K01971     595      751     0.284      592     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      697     0.406      308     
sro:Sros_6714 DNA primase small subunit                            334      687     0.407      270     
chy:CHY_0025 conserved hypothetical protein             K01971     293      685     0.391      266     
afu:AF_1725 DNA ligase, putative                        K01971     313      683     0.429      312     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      666     0.376      335     
sgr:SGR_1023 conserved hypothetical protein                        345      657     0.390      269     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335      651     0.390      267     
ase:ACPL_7075 DNA ligase (ATP)                                     341      650     0.380      303     
sma:SAVERM_1696 putative DNA primase, small subunit                338      648     0.388      294     
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      627     0.417      309     
nca:Noca_2856 DNA primase-like protein                  K01971     455      615     0.318      440     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      587     0.348      305     
pde:Pden_4186 conserved hypothetical protein            K01971     330      571     0.368      299     
det:DET0850 conserved hypothetical protein                         183      563     0.500      194     
pfl:PFL_6269 Hypothetical protein                       K01971     186      561     0.557      149     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      521     0.312      314     
mba:Mbar_A2115 conserved hypothetical protein                      151      479     0.484      159     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      476     0.304      316     
pab:PAB2002 lig DNA ligase                              K10747     559      473     0.323      328     
mac:MA_3428 conserved hypothetical protein                         156      471     0.451      162     
mma:MM_0209 hypothetical protein                                   152      469     0.456      160     
pfu:PF1635 DNA ligase (lig)                             K10747     561      465     0.315      349     
ag:ABS72370 DNA ligase (ATP, ADP or GTP) (EC:6.5.1.7)   K10747     606      458     0.318      371     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      440     0.311      351     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      436     0.293      358     
ton:TON_1515 thermostable DNA ligase                    K10747     562      416     0.302      351     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      408     0.311      396     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      400     0.328      354     
tac:Ta1148 DNA ligase related protein                   K10747     588      400     0.312      330     
hth:HTH_1466 DNA ligase                                            572      399     0.319      307     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      399     0.308      347     
aae:aq_1394 DNA ligase (ATP dependent)                             585      397     0.321      377     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      386     0.335      337     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      384     0.290      348     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      378     0.282      347     
ksk:KSE_05320 hypothetical protein                      K01971     173      378     0.438      178     
mth:MTH_1580 DNA ligase                                 K10747     561      375     0.325      348     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      366     0.316      354     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      364     0.314      354     
hma:rrnAC0463 DNA ligase                                K10747     554      364     0.318      355     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      362     0.316      361     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      360     0.308      354     
bta:100124507 DNA ligase 1                              K10747     916      360     0.308      354     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      358     0.302      351     
cpoc:100734013 DNA ligase 1                             K10747     919      357     0.311      354     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      357     0.311      354     
sto:STK_02230 DNA ligase                                K10747     600      357     0.272      371     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      356     0.311      354     
pai:PAE0833 DNA ligase                                  K10747     584      355     0.297      377     
ssc:100520434 DNA ligase 1                              K10747     923      354     0.308      354     
pmur:107285325 DNA ligase 1                             K10747     944      353     0.307      355     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      351     0.286      423     
pto:PTO0672 DNA ligase                                  K10747     590      351     0.291      323     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      349     0.279      355     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      347     0.320      356     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      346     0.315      355     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      342     0.317      356     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      341     0.315      356     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      341     0.315      356     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      338     0.302      354     
rno:81513 DNA ligase 1                                  K10747     913      338     0.310      355     
hal:VNG_0881G DNA ligase                                K10747     561      334     0.324      306     
dne:112995498 DNA ligase 1                              K10747     868      332     0.304      355     
mmu:16881 DNA ligase 1                                  K10747     916      331     0.299      354     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      326     0.298      376     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      326     0.293      352     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      325     0.311      360     
xom:XOO1771 DNA ligase                                             534      325     0.298      315     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      325     0.283      371     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      324     0.271      391     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      323     0.301      352     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      321     0.279      330     
xtr:100271763 DNA ligase 1                              K10747    1040      321     0.287      352     
ola:101167483 DNA ligase 1                              K10747     993      320     0.288      351     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      319     0.292      384     
dre:556995 DNA ligase 1                                 K10747    1058      319     0.291      351     
ani:ANIA_06069 hypothetical protein                     K10747     932      314     0.286      384     
ncr:NCU06481 DNA ligase                                 K10747     923      312     0.292      384     
cne:CNI04170 DNA ligase, putative                       K10747     803      310     0.288      371     
amj:102566879 DNA ligase 1                              K10747     954      309     0.287      352     
cin:100181519 DNA ligase 1-like                         K10747    1060      308     0.286      350     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      308     0.281      431     
mgr:MGG_06370 DNA ligase 1                              K10747     896      305     0.292      384     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      304     0.280      443     
fgr:FGSG_05453 DNA ligase                               K10747     867      302     0.298      346     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      300     0.299      331     
xla:397978 DNA ligase 1                                 K10747    1070      300     0.283      350     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      295     0.297      347     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      292     0.292      415     
smo:SELMODRAFT_119719 hypothetical protein                         638      291     0.284      352     
tcr:506835.120 DNA ligase I                             K10747     701      291     0.277      382     
ath:AT1G08130 DNA ligase 1                              K10747     790      291     0.300      350     
dme:Dmel_CG5602 DNA ligase 1                                       747      290     0.282      351     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      286     0.286      353     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      283     0.305      367     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      282     0.290      334     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      281     0.267      352     
gmx:100803989 DNA ligase 1                                         701      280     0.293      335     
vvi:100256907 DNA ligase 1                              K10747     782      280     0.289      350     
yli:2908208 DNA ligase 1                                K10747     711      280     0.256      351     
csv:101213447 DNA ligase 1                              K10747     801      277     0.290      352     
sly:101262281 DNA ligase 1                              K10747     802      276     0.290      352     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      276     0.273      362     
tgo:7896565 DNA ligase 1, putative                                1331      275     0.283      311     
nve:5510104 DNA ligase 1                                K10747     959      274     0.274      351     
nta:107828011 DNA ligase 1                              K10747     775      273     0.283      350     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      272     0.271      340     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      269     0.277      350     
sot:102604298 DNA ligase 1-like                         K10747     802      268     0.286      350     
mdo:100616962 DNA ligase 1-like                                    632      267     0.281      327     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      267     0.276      351     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      267     0.290      359     
tva:5466150 DNA ligase 1/3 family member family                    679      264     0.280      296     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      263     0.278      352     
mdm:103423359 DNA ligase 1-like                         K10747     796      262     0.283      350     
tca:658633 DNA ligase                                   K10747     756      262     0.271      350     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      261     0.286      392     
rcu:8275235 DNA ligase 1                                K10747     796      259     0.279      362     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      259     0.277      394     
cit:102628869 DNA ligase 1                              K10747     806      258     0.280      353     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      258     0.280      350     
mtr:11410741 DNA ligase 1 isoform X1                    K10747     773      257     0.274      354     
smm:Smp_019840.1 DNA ligase I, putative                            783      256     0.277      383     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      255     0.285      351     
pif:PITG_04709 DNA ligase, putative                               3896      251     0.249      385     
ppp:112290811 DNA ligase 1                              K10747     776      246     0.291      357     
ehi:EHI_111060 DNA ligase                               K10747     685      244     0.280      350     
tps:THAPSDRAFT_268404 ligase                            K10747     633      243     0.287      355     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      241     0.259      352     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      240     0.265      340     
zga:ZOBELLIA_2113 DNA ligase                                       554      239     0.264      314     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      238     0.306      310     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      227     0.252      357     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      219     0.247      352     
gla:GL50803_007649 DNA ligase (ATP)                                810      215     0.276      351     
pti:PHATR_51005 hypothetical protein                    K10747     651      214     0.285      333     
tgu:100225693 DNA ligase 4                              K10777     911      205     0.249      349     
clv:102093808 DNA ligase 4                              K10777     912      203     0.239      347     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      202     0.285      312     
vfi:VF_1450 DNA ligase                                  K26441     285      198     0.275      240     
tru:101068311 DNA ligase 3                              K10776     998      192     0.240      366     
hel:HELO_1487 RecBCD enzyme subunit RecB                K03582    1351      188     0.236      911     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      184     0.278      302     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      182     0.266      289     
vch:VC_1542 DNA ligase                                  K26441     282      172     0.266      274     
afr:AFE_1392 L-aspartate oxidase                        K00278     529      171     0.255      486     
vpa:VP1477 DNA ligase                                   K26441     280      168     0.263      247     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      161     0.253      288     
nme:NMB2048 DNA ligase                                  K26441     274      160     0.248      286     
ngo:NGO_2034 DNA ligase                                 K26441     274      154     0.236      288     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      146     0.220      300     
cps:CPS_4404 DNA ligase, ATP-dependent                  K26441     292      140     0.232      185     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      139     0.283      166     
ecs:ECs_1305 IS-excision enhancer IEE                              786      134     0.237      279     
lcb:LCABL_24920 Glutamyl-tRNA synthetase (Glutamate--tR K09698     497      121     0.266      199     
rso:RSp0753 probable transmembrane protein                         368      116     0.246      179     
btk:BT9727_2382 acetyltransferase, GNAT family                     194       97     0.325      80      

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