SSDB Best Search Result

Entry:mav:MAV_1056 (766 a.a.)
Name:DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 213 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770     4274     0.814      774     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770     4255     0.811      774     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759     4094     0.793      758     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759     4083     0.792      758     
msm:MSMEG_5570 DNA ligase                               K01971     755     3676     0.709      762     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763     3667     0.709      769     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750     3404     0.677      758     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758     2999     0.593      757     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766     2953     0.586      758     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808     2643     0.527      819     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812     2460     0.506      797     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899     2148     0.427      894     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1050     0.406      520     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      984     0.378      529     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      975     0.378      547     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      958     0.376      543     
sno:Snov_0819 DNA ligase D                              K01971     842      936     0.368      544     
ase:ACPL_1154 DNA ligase (ATP)                          K01971     348      930     0.445      344     
phe:Phep_1702 DNA ligase D                              K01971     877      926     0.359      532     
dsy:DSY0616 hypothetical protein                        K01971     818      925     0.356      506     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      921     0.361      543     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771      901     0.359      537     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      898     0.360      525     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      890     0.490      288     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      888     0.344      585     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      879     0.339      604     
ssy:SLG_04290 putative DNA ligase                       K01971     835      878     0.345      542     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      878     0.462      301     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      871     0.500      290     
cpy:Cphy_1729 DNA ligase D                              K01971     813      870     0.332      506     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      869     0.350      532     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      868     0.349      538     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      861     0.335      585     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      861     0.357      532     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      848     0.342      547     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      847     0.346      512     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      847     0.345      537     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      846     0.325      567     
ppu:PP_3260 DNA ligase D                                K01971     833      842     0.347      519     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      840     0.335      556     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      824     0.331      550     
rle:pRL120229 putative DNA ligase family protein        K01971     881      820     0.326      552     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      814     0.450      300     
swi:Swit_3982 DNA ligase D                              K01971     837      813     0.330      542     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      803     0.391      468     
stp:Strop_3967 DNA primase, small subunit               K01971     302      799     0.442      301     
xau:Xaut_4365 DNA ligase D                              K01971     886      776     0.305      551     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      774     0.320      531     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      768     0.409      296     
sma:SAVERM_2946 putative DNA ligase                     K01971     293      760     0.421      304     
rpa:TX73_018915 DNA ligase D                            K01971     914      758     0.319      580     
sgu:SGLAU_02470 ATP-dependent DNA ligase                K01971     326      719     0.439      310     
sgr:SGR_6690 putative ATP-dependent DNA ligase          K01971     320      713     0.429      310     
sco:SCO7345 probable ATP-dependent DNA ligase.          K01971     326      709     0.420      314     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      660     0.300      709     
scl:sce3523 unnamed protein product; High confidence in K01971     762      622     0.400      315     
vg:22109413 Rhizobium phage vB_RleM_PPF1; non-homologou K01971     348      580     0.357      311     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      565     0.380      308     
afu:AF_1725 DNA ligase, putative                        K01971     313      531     0.350      317     
chy:CHY_0025 conserved hypothetical protein             K01971     293      503     0.307      280     
sro:Sros_6714 DNA primase small subunit                            334      493     0.294      333     
mac:MA_3428 conserved hypothetical protein                         156      487     0.500      154     
mma:MM_0209 hypothetical protein                                   152      484     0.497      149     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      475     0.309      282     
mba:Mbar_A2115 conserved hypothetical protein                      151      474     0.500      144     
det:DET0850 conserved hypothetical protein                         183      469     0.465      155     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      461     0.304      309     
oih:OB3034 hypothetical conserved protein               K01971     595      459     0.304      303     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      454     0.311      280     
pde:Pden_4186 conserved hypothetical protein            K01971     330      452     0.308      276     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      433     0.328      326     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      428     0.288      576     
pab:PAB2002 lig DNA ligase                              K10747     559      428     0.320      353     
pfu:PF1635 DNA ligase (lig)                             K10747     561      420     0.331      326     
ton:TON_1515 thermostable DNA ligase                    K10747     562      411     0.332      328     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      409     0.267      303     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      390     0.326      328     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      380     0.271      314     
pfl:PFL_6269 Hypothetical protein                       K01971     186      377     0.387      168     
hal:VNG_0881G DNA ligase                                K10747     561      369     0.284      415     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      347     0.289      370     
hth:HTH_1466 DNA ligase                                            572      346     0.306      284     
hma:rrnAC0463 DNA ligase                                K10747     554      339     0.289      367     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      338     0.278      284     
aae:aq_1394 DNA ligase (ATP dependent)                             585      338     0.292      325     
cne:CNI04170 DNA ligase, putative                       K10747     803      336     0.303      310     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      331     0.294      327     
cin:100181519 DNA ligase 1-like                         K10747    1060      317     0.302      311     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      312     0.298      309     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      312     0.292      315     
ncr:NCU06481 DNA ligase                                 K10747     923      309     0.279      301     
tac:Ta1148 DNA ligase related protein                   K10747     588      309     0.277      375     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      308     0.291      347     
pai:PAE0833 DNA ligase                                  K10747     584      306     0.283      307     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      305     0.276      308     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      304     0.273      326     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      302     0.282      309     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      300     0.289      311     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      300     0.276      330     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      298     0.282      308     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      297     0.250      543     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      296     0.271      292     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      296     0.275      346     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      295     0.286      311     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      293     0.293      300     
dre:556995 DNA ligase 1                                 K10747    1058      293     0.288      288     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      290     0.275      309     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      290     0.256      359     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      289     0.294      313     
yli:2908208 DNA ligase 1                                K10747     711      289     0.275      309     
bta:100124507 DNA ligase 1                              K10747     916      289     0.287      300     
ssc:100520434 DNA ligase 1                              K10747     923      288     0.290      300     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      286     0.287      300     
ola:101167483 DNA ligase 1                              K10747     993      286     0.299      288     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      286     0.285      309     
mmu:16881 DNA ligase 1                                  K10747     916      286     0.273      311     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      285     0.290      310     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      285     0.285      309     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      285     0.292      271     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      284     0.288      313     
xtr:100271763 DNA ligase 1                              K10747    1040      284     0.287      307     
cpoc:100734013 DNA ligase 1                             K10747     919      283     0.283      311     
fgr:FGSG_05453 DNA ligase                               K10747     867      283     0.266      290     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      282     0.280      311     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      282     0.263      357     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      281     0.270      300     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      280     0.273      311     
mdo:100616962 DNA ligase 1-like                                    632      280     0.291      268     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      280     0.278      281     
smo:SELMODRAFT_119719 hypothetical protein                         638      279     0.283      314     
mgr:MGG_06370 DNA ligase 1                              K10747     896      278     0.280      289     
mdm:103423359 DNA ligase 1-like                         K10747     796      276     0.283      315     
nve:5525240 DNA ligase 4                                K10777     903      276     0.261      348     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      276     0.267      307     
ksk:KSE_05320 hypothetical protein                      K01971     173      274     0.338      136     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      274     0.267      344     
rno:81513 DNA ligase 1                                  K10747     913      274     0.267      311     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      273     0.275      302     
xla:397978 DNA ligase 1                                 K10747    1070      272     0.283      307     
csv:101213447 DNA ligase 1                              K10747     801      271     0.277      314     
pti:PHATR_51005 hypothetical protein                    K10747     651      267     0.314      287     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      266     0.294      310     
sto:STK_02230 DNA ligase                                K10747     600      266     0.262      309     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      264     0.280      307     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      263     0.280      311     
xom:XOO1771 DNA ligase                                             534      263     0.287      268     
amj:102566879 DNA ligase 1                              K10747     954      261     0.280      307     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      261     0.293      270     
rcu:8275235 DNA ligase 1                                K10747     796      261     0.281      317     
vvi:100266816 DNA ligase 6 isoform X1                             1449      261     0.265      332     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      261     0.292      312     
cit:102618631 DNA ligase 6 isoform X1                             1402      260     0.273      330     
ppp:112290811 DNA ligase 1                              K10747     776      260     0.292      319     
ath:AT1G08130 DNA ligase 1                              K10747     790      260     0.283      336     
pto:PTO0672 DNA ligase                                  K10747     590      260     0.242      393     
tps:THAPSDRAFT_268404 ligase                            K10747     633      259     0.296      280     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      259     0.262      302     
dne:112995498 DNA ligase 1                              K10747     868      258     0.281      270     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      258     0.262      301     
sly:101249429 DNA ligase 6 isoform X1                             1441      258     0.264      329     
pmur:107285325 DNA ligase 1                             K10747     944      255     0.276      301     
ani:ANIA_06069 hypothetical protein                     K10747     932      254     0.257      300     
sot:102603887 DNA ligase 1                                        1441      252     0.255      329     
tva:5466150 DNA ligase 1/3 family member family                    679      252     0.277      372     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      252     0.253      300     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      252     0.279      301     
dme:Dmel_CG5602 DNA ligase 1                                       747      252     0.277      307     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      251     0.277      311     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      248     0.269      301     
mtr:25502748 DNA ligase 1                                          713      248     0.288      319     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      248     0.272      279     
gmx:100803989 DNA ligase 1                                         701      247     0.266      350     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      247     0.281      270     
nta:107828011 DNA ligase 1                              K10747     775      246     0.269      324     
bmor:101739679 DNA ligase 3                             K10776     998      244     0.266      305     
mth:MTH_1580 DNA ligase                                 K10747     561      241     0.253      387     
zma:103651343 DNA ligase 6                                        1397      237     0.275      287     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      237     0.244      315     
osa:4324149 DNA ligase 6 isoform X1                               1404      237     0.255      286     
tcr:506835.120 DNA ligase I                             K10747     701      232     0.254      311     
tgo:7896565 DNA ligase 1, putative                                1331      229     0.281      270     
pif:PITG_04614 DNA ligase, putative                                497      225     0.269      386     
tca:658633 DNA ligase                                   K10747     756      224     0.282      266     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      215     0.271      535     
ehi:EHI_111060 DNA ligase                               K10747     685      212     0.245      322     
tru:101068311 DNA ligase 3                              K10776     998      211     0.244      283     
clv:102093808 DNA ligase 4                              K10777     912      208     0.246      362     
tgu:100225693 DNA ligase 4                              K10777     911      208     0.241      361     
smm:Smp_019840.1 DNA ligase I, putative                            783      201     0.251      342     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      199     0.257      276     
zga:ZOBELLIA_2113 DNA ligase                                       554      185     0.279      208     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      164     0.313      134     
ser:SERP1534 DNA ligase, ATP-dependent                             432      156     0.243      239     
gla:GL50803_007649 DNA ligase (ATP)                                810      155     0.235      187     
vfi:VF_1450 DNA ligase                                  K26441     285      155     0.241      266     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      153     0.282      213     
vpa:VP1477 DNA ligase                                   K26441     280      147     0.253      241     
nme:NMB2048 DNA ligase                                  K26441     274      145     0.246      224     
ngo:NGO_2034 DNA ligase                                 K26441     274      143     0.250      224     
cgl:Cgl2029 Predicted Rossmann-fold nucleotide-binding  K04096     394      137     0.228      334     
cau:Caur_3404 conserved hypothetical protein                       324      133     0.254      299     
eca:ECA2875 putative ATP-binding protein                          1110      130     0.225      479     
pma:Pro_0047 Superfamily II DNA/RNA helicases, SNF2 fam           1062      127     0.220      295     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      127     0.215      237     
ava:Ava_3571 hypothetical protein                                  663      126     0.199      552     
vch:VC_1542 DNA ligase                                  K26441     282      126     0.302      86      
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      124     0.263      243     
ctt:CtCNB1_2827 CHAD domain containing protein                     239      121     0.275      189     
anb:ANA_C12637 glycosyl transferase family 2                       322      118     0.240      204     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      115     0.272      81      
afn:Acfer_0761 CRISPR-associated protein Cas1           K15342     343      112     0.267      165     
tde:TDE_2752 conserved hypothetical protein                         90       97     0.327      49      
ban:BA_1475 hypothetical protein                                    75       83     0.300      50      

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