KEGG   PATHWAY: xtr04514
Entry
xtr04514                    Pathway                                
Name
Cell adhesion molecules - Xenopus tropicalis (tropical clawed frog)
Description
Cell adhesion molecules (CAMs) are (glyco)proteins expressed on the cell surface and play a critical role in a wide array of biologic processes that include hemostasis, the immune response, inflammation, embryogenesis, and development of neuronal tissue. There are four main groups: the integrin family, the immunoglobulin superfamily, selectins, and cadherins. Membrane proteins that mediate immune cell–cell interactions fall into different categories, namely those involved in antigen recognition, costimulation and cellular adhesion. Furthermore cell-cell adhesions are important for brain morphology and highly coordinated brain functions such as memory and learning. During early development of the nervous system, neurons elongate their axons towards their targets and establish and maintain synapses through formation of cell-cell adhesions. Cell-cell adhesions also underpin axon-axon contacts and link neurons with supporting schwann cells and oligodendrocytes.
Class
Environmental Information Processing; Signaling molecules and interaction
Pathway map
xtr04514  Cell adhesion molecules
xtr04514

Other DBs
GO: 0050839
Organism
Xenopus tropicalis (tropical clawed frog) [GN:xtr]
Gene
100037844  cntnap1; contactin-associated protein 1 precursor [KO:K07379]
100038138  sdc1; syndecan-1 [KO:K06257]
100038291  ncam1; neural cell adhesion molecule 1 isoform X1 [KO:K06491]
100101669  cd276; CD276 antigen isoform X1 [KO:K06746]
100101672  vcan; versican core protein [KO:K06793]
100124734  l1cam; neural cell adhesion molecule L1 precursor [KO:K06550]
100124949  lrrc4b; leucine-rich repeat-containing protein 4B precursor [KO:K16360]
100124975  cldn15.1; claudin-15 [KO:K06087]
100124997  slitrk1; SLIT and NTRK-like protein 1 precursor [KO:K25832]
100126210  cd28; T-cell-specific surface glycoprotein CD28 precursor [KO:K06470]
100127647  nrxn1; neurexin-1 isoform X1 [KO:K07377]
100127669  slitrk3; SLIT and NTRK-like protein 3 [KO:K25834]
100127701  ptprm; receptor-type tyrosine-protein phosphatase mu [KO:K05693] [EC:3.1.3.48]
100127707  [KO:K06751]
100127725  hla-a; major histocompatibility complex, class I, A precursor [KO:K06751]
100127726  negr1; neuronal growth regulator 1 precursor [KO:K06775]
100127727  hla-dqa1; major histocompatibility complex, class II, DQ alpha 1 precursor [KO:K06752]
100134998  sdc3; syndecan-3 [KO:K16337]
100135351  cd22; B-cell receptor CD22 [KO:K06467]
100144691  itgav; integrin alpha-V [KO:K06487]
100144729  cdh4; cadherin 4 precursor [KO:K06797]
100144973  sdc4; syndecan 4 precursor [KO:K16338]
100145297  nectin1l1; uncharacterized protein LOC100145297 isoform X1 [KO:K06081]
100145356  cldn8.4; claudin 8, gene 2 [KO:K06087]
100145434  ptprd; receptor-type tyrosine-protein phosphatase delta precursor [KO:K06777] [EC:3.1.3.48]
100145508  [KO:K06752]
100145553  nectin1l2.2; nectin-1 isoform X2 [KO:K06081]
100145623  cd99l2; CD99 antigen-like protein 2 precursor [KO:K06520]
100151712  cdh2; cadherin-2 precursor [KO:K06736]
100151722  ncam2; neural cell adhesion molecule 2 precursor [KO:K06491]
100170189  neo1; neogenin [KO:K06766]
100188921  lrrc4c; leucine-rich repeat-containing protein 4C [KO:K07523]
100216067  esam; endothelial cell-selective adhesion molecule precursor [KO:K06787]
100216214  nrcam; neuronal cell adhesion molecule precursor [KO:K06756]
100270675  cd40; tumor necrosis factor receptor superfamily member 5 precursor [KO:K03160]
100329186  nlgn1; neuroligin-1 precursor [KO:K07378]
100329187  nlgn2; neuroligin-2 isoform X1 [KO:K07378]
100329188  nlgn3; neuroligin-3 precursor [KO:K07378]
100329189  nlgn4x; neuroligin-4, X-linked [KO:K07378]
100379902  nrxn3; neurexin 3 isoform X2 [KO:K07377]
100485005  selp; E-selectin [KO:K06496]
100485504  nectin1l2.1; nectin-1 isoform X1 [KO:K06081]
100485528  cldn22; putative claudin-24 [KO:K06087]
100485589  cldn8.3; claudin-8 [KO:K06087]
100485633  cdh3; blastomere cadherin [KO:K05689]
100485738  cldn8.2; claudin-8 [KO:K06087]
100485900  cldn8.1; claudin-8 [KO:K06087]
100485986  nfasc; neurofascin isoform X1 [KO:K06757]
100486332  itgb7; integrin beta-7 [KO:K06590]
100486350  cd86; T-lymphocyte activation antigen CD86 [KO:K05413]
100486430  siglec1; sialoadhesin [KO:K06548]
100486498  [KO:K06081]
100486784  [KO:K06087]
100486904  cldn17.3; claudin-8 [KO:K06087]
100487049  cntn2; contactin-2 isoform X2 [KO:K06760]
100487058  cldn17.1; claudin-8 [KO:K06087]
100487379  [KO:K06449]
100487602  cntn1; contactin-1 [KO:K06759]
100487624  itga8; integrin alpha-8 [KO:K06584]
100487740  madcam1; mucosal addressin cell adhesion molecule 1 [KO:K06779]
100487924  itga4; integrin alpha-4 [KO:K06483]
100488406  nectin1; nectin-1 isoform X2 [KO:K06081]
100488458  cdh5; cadherin-5 [KO:K06533]
100488472  [KO:K06467]
100488612  vcam1; vascular cell adhesion protein 1 [KO:K06527]
100489038  cd40lg; CD40 ligand [KO:K03161]
100489106  cdh15; cadherin-15 [KO:K06809]
100489117  [KO:K06458]
100489120  [KO:K06467]
100489170  cldn2; claudin-2 [KO:K06087]
100489577  igsf11; immunoglobulin superfamily member 11 [KO:K06791]
100489665  slitrk6; SLIT and NTRK-like protein 6 [KO:K25837]
100489740  ntng2; netrin-G2 isoform X2 [KO:K16359]
100490204  cadm3; cell adhesion molecule 3 isoform X1 [KO:K06780]
100490546  cldn19; claudin-19 [KO:K06087]
100490599  cldn23; claudin-23 [KO:K06087]
100491070  [KO:K06454]
100491218  nrxn2; neurexin-2-beta isoform X11 [KO:K07377]
100491602  cldn15.2; claudin-15 isoform X2 [KO:K06087]
100491910  cldn14; claudin-14 [KO:K06087]
100492154  selplg; P-selectin glycoprotein ligand 1 [KO:K06544]
100492474  glg1; Golgi apparatus protein 1 isoform X2 [KO:K06816]
100492659  itgb2; integrin beta-2 isoform X4 [KO:K06464]
100492817  cldn11; claudin-11 isoform X2 [KO:K06087]
100492900  cldn18; claudin-18 isoform X2 [KO:K06087]
100492957  [KO:K06087]
100493254  ptprf; receptor-type tyrosine-protein phosphatase F isoform X8 [KO:K05695] [EC:3.1.3.48]
100493413  cldn6.2; claudin-4 [KO:K06087]
100493434  ptprc; receptor-type tyrosine-protein phosphatase C [KO:K06478] [EC:3.1.3.48]
100493671  lrrc4; leucine-rich repeat-containing protein 4 [KO:K16351]
100493686  pecam1; platelet endothelial cell adhesion molecule isoform X1 [KO:K06471]
100493714  ctla4; cytotoxic T-lymphocyte protein 4 [KO:K06538]
100493997  [KO:K06713]
100494014  slitrk5; SLIT and NTRK-like protein 5 [KO:K25836]
100494090  ntng1; netrin-G1 isoform X3 [KO:K07522]
100494147  mag; myelin-associated glycoprotein isoform X1 [KO:K06771]
100494719  cd99; CD99 antigen isoform X1 [KO:K06520]
100494771  itga9; integrin alpha-9 [KO:K06585]
100494899  itgb8; integrin beta-8 [KO:K06591]
100495183  [KO:K06752]
100495225  [KO:K06751]
100495227  vsig8; coxsackievirus and adenovirus receptor [KO:K06788]
100495336  mhc2a; class II histocompatibility antigen, M alpha chain [KO:K06752]
100495488  itgal; integrin alpha-L isoform X1 [KO:K05718]
100495489  itgad; integrin alpha-M [KO:K06461]
100496024  [KO:K06751]
100496232  [KO:K06087]
100496233  nectin3; nectin-3 [KO:K06592]
100496309  cldn16; claudin-16 [KO:K06087]
100496522  cadm1; cell adhesion molecule 1 isoform X4 [KO:K06781]
100497153  slitrk2; SLIT and NTRK-like protein 2 [KO:K25833]
100497305  [KO:K06456]
100497316  slitrk4; SLIT and NTRK-like protein 4 [KO:K25835]
100497992  itga6; integrin alpha-6 isoform X1 [KO:K06485]
100498512  sell; E-selectin [KO:K06495]
101730727  pdcd1; programmed cell death protein 1 isoform X1 [KO:K06744]
101731191  [KO:K06745]
101731253  pdcd1lg2; programmed cell death 1 ligand 2 [KO:K06708]
101731682  [KO:K06087]
101731775  [KO:K06461]
101732192  cldn34; claudin-34 [KO:K06087]
101732704  icoslg; ICOS ligand isoform X1 [KO:K06710]
101733278  cd8b; T-cell surface glycoprotein CD8 beta chain [KO:K06459]
101733407  cldn10; claudin-10 isoform X1 [KO:K06087]
101733943  cd80; T-lymphocyte activation antigen CD80 [KO:K05412]
101734126  [KO:K06781]
101734270  tigit; T-cell immunoreceptor with Ig and ITIM domains [KO:K16350]
101734513  jam3; junctional adhesion molecule C [KO:K06785]
101735096  [KO:K06461]
101735289  [KO:K06747]
105947528  [KO:K06567]
116408728  [KO:K06449]
394468  cldn6.1; claudin-6 [KO:K06087]
394674  cldn7; claudin 7 precursor [KO:K06087]
394767  itgb1; integrin beta-1 precursor [KO:K05719]
448156  nectin2; nectin-2 precursor [KO:K06081]
448229  cldn3; claudin-3 [KO:K06087]
448343  cldn5; claudin-5 [KO:K06087]
493384  f11r; F11 receptor precursor [KO:K06089]
493551  vtcn1; V-set domain-containing T-cell activation inhibitor 1 [KO:K06747]
496497  cxadr; coxsackievirus and adenovirus receptor precursor [KO:K06788]
496981  vsir; platelet receptor Gi24 [KO:K23268]
548421  cldn1; claudin-1 [KO:K06087]
548702  ocln; occludin [KO:K06088]
549417  cldn4; claudin-4 [KO:K06087]
549605  cldn12; claudin-12 [KO:K06087]
549917  sdc2; syndecan-2 precursor [KO:K16336]
779546  cdh1; cadherin-1 [KO:K05689]
779603  cd34; hematopoietic progenitor cell antigen CD34 [KO:K06474]
779665  jam2; junctional adhesion molecule B [KO:K06735]
780189  cntnap2; contactin-associated protein-like 2 [KO:K07380]
780198  mpz; myelin protein P0 isoform MPZ precursor [KO:K06770]
780210  alcam; CD166 antigen precursor [KO:K06547]
780218  ocel1.2; uncharacterized protein LOC780218 [KO:K06088]
Reference
  Authors
Barclay AN.
  Title
Membrane proteins with immunoglobulin-like domains--a master superfamily of interaction molecules.
  Journal
Semin Immunol 15:215-23 (2003)
DOI:10.1016/S1044-5323(03)00047-2
Reference
  Authors
Sharpe AH, Freeman GJ.
  Title
The B7-CD28 superfamily.
  Journal
Nat Rev Immunol 2:116-26 (2002)
DOI:10.1038/nri727
Reference
PMID:9597126
  Authors
Grewal IS, Flavell RA.
  Title
CD40 and CD154 in cell-mediated immunity.
  Journal
Annu Rev Immunol 16:111-35 (1998)
DOI:10.1146/annurev.immunol.16.1.111
Reference
  Authors
Dardalhon V, Schubart AS, Reddy J, Meyers JH, Monney L, Sabatos CA, Ahuja R, Nguyen K, Freeman GJ, Greenfield EA, Sobel RA, Kuchroo VK.
  Title
CD226 is specifically expressed on the surface of Th1 cells and regulates their expansion and effector functions.
  Journal
J Immunol 175:1558-65 (2005)
DOI:10.4049/jimmunol.175.3.1558
Reference
  Authors
Montoya MC, Sancho D, Vicente-Manzanares M, Sanchez-Madrid F.
  Title
Cell adhesion and polarity during immune interactions.
  Journal
Immunol Rev 186:68-82 (2002)
DOI:10.1034/j.1600-065X.2002.18607.x
Reference
  Authors
Dejana E.
  Title
Endothelial cell-cell junctions: happy together.
  Journal
Nat Rev Mol Cell Biol 5:261-70 (2004)
DOI:10.1038/nrm1357
Reference
  Authors
Bazzoni G.
  Title
The JAM family of junctional adhesion molecules.
  Journal
Curr Opin Cell Biol 15:525-30 (2003)
DOI:10.1016/S0955-0674(03)00104-2
Reference
  Authors
Becker BF, Heindl B, Kupatt C, Zahler S.
  Title
Endothelial function and hemostasis.
  Journal
Z Kardiol 89:160-7 (2000)
DOI:10.1007/PL00007320
Reference
PMID:9150551
  Authors
Elangbam CS, Qualls CW Jr, Dahlgren RR.
  Title
Cell adhesion molecules--update.
  Journal
Vet Pathol 34:61-73 (1997)
DOI:10.1177/030098589703400113
Reference
  Authors
Muller WA.
  Title
Leukocyte-endothelial-cell interactions in leukocyte transmigration and the inflammatory response.
  Journal
Trends Immunol 24:327-34 (2003)
DOI:10.1016/S1471-4906(03)00117-0
Reference
  Authors
Yamagata M, Sanes JR, Weiner JA.
  Title
Synaptic adhesion molecules.
  Journal
Curr Opin Cell Biol 15:621-32 (2003)
DOI:10.1016/S0955-0674(03)00107-8
Reference
  Authors
Ethell IM, Pasquale EB.
  Title
Molecular mechanisms of dendritic spine development and remodeling.
  Journal
Prog Neurobiol 75:161-205 (2005)
DOI:10.1016/j.pneurobio.2005.02.003
Reference
  Authors
Benson DL, Schnapp LM, Shapiro L, Huntley GW.
  Title
Making memories stick: cell-adhesion molecules in synaptic plasticity.
  Journal
Trends Cell Biol 10:473-82 (2000)
DOI:10.1016/S0962-8924(00)01838-9
Reference
  Authors
Rosdahl JA, Mourton TL, Brady-Kalnay SM.
  Title
Protein kinase C delta (PKCdelta) is required for protein tyrosine phosphatase mu (PTPmu)-dependent neurite outgrowth.
  Journal
Mol Cell Neurosci 19:292-306 (2002)
DOI:10.1006/mcne.2001.1071
Reference
  Authors
Dunican DJ, Doherty P.
  Title
The generation of localized calcium rises mediated by cell adhesion molecules and their role in neuronal growth cone motility.
  Journal
Mol Cell Biol Res Commun 3:255-63 (2000)
DOI:10.1006/mcbr.2000.0225
Reference
  Authors
Girault JA, Peles E.
  Title
Development of nodes of Ranvier.
  Journal
Curr Opin Neurobiol 12:476-85 (2002)
DOI:10.1016/S0959-4388(02)00370-7
Reference
  Authors
Arroyo EJ, Scherer SS.
  Title
On the molecular architecture of myelinated fibers.
  Journal
Histochem Cell Biol 113:1-18 (2000)
DOI:10.1007/s004180050001
Reference
  Authors
Salzer JL.
  Title
Polarized domains of myelinated axons.
  Journal
Neuron 40:297-318 (2003)
DOI:10.1016/S0896-6273(03)00628-7
Reference
  Authors
Irie K, Shimizu K, Sakisaka T, Ikeda W, Takai Y.
  Title
Roles and modes of action of nectins in cell-cell adhesion.
  Journal
Semin Cell Dev Biol 15:643-56 (2004)
DOI:10.1016/j.semcdb.2004.09.002
Reference
  Authors
Nakanishi H, Takai Y.
  Title
Roles of nectins in cell adhesion, migration and polarization.
  Journal
Biol Chem 385:885-92 (2004)
DOI:10.1515/BC.2004.116
Reference
  Authors
Siu MK, Cheng CY.
  Title
Extracellular matrix: recent advances on its role in junction dynamics in the seminiferous epithelium during spermatogenesis.
  Journal
Biol Reprod 71:375-91 (2004)
DOI:10.1095/biolreprod.104.028225
Reference
  Authors
Lee NP, Cheng CY.
  Title
Adaptors, junction dynamics, and spermatogenesis.
  Journal
Biol Reprod 71:392-404 (2004)
DOI:10.1095/biolreprod.104.027268
Reference
  Authors
Inagaki M, Irie K, Ishizaki H, Tanaka-Okamoto M, Morimoto K, Inoue E, Ohtsuka T, Miyoshi J, Takai Y.
  Title
Roles of cell-adhesion molecules nectin 1 and nectin 3 in ciliary body development.
  Journal
Development 132:1525-37 (2005)
DOI:10.1242/dev.01697
Reference
  Authors
Marthiens V, Gavard J, Lambert M, Mege RM.
  Title
Cadherin-based cell adhesion in neuromuscular development.
  Journal
Biol Cell 94:315-26 (2002)
DOI:10.1016/S0248-4900(02)00005-9
Reference
  Authors
Krauss RS, Cole F, Gaio U, Takaesu G, Zhang W, Kang JS.
  Title
Close encounters: regulation of vertebrate skeletal myogenesis by cell-cell contact.
  Journal
J Cell Sci 118:2355-62 (2005)
DOI:10.1242/jcs.02397
Related
pathway
xtr04520  Adherens junction
xtr04530  Tight junction
KO pathway
ko04514   

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