| MAPK signaling |  
| N00001    | 
EGF | → | EGFR | → | GRB2 | → | SOS | → | RAS | → | RAF | → | MEK | → | ERK | → | CCND1 | 
 
| N00540    | 
X | → | SRC | → | GRB2 | → | SOS | → | RAS | → | RAF | → | MEK | → | ERK | → | ELK1 | 
 
| N00216    | 
HGF | → | MET | → | GRB2 | → | SOS | → | RAS | → | RAF | → | MEK | → | ERK | 
 
| N00541    | 
  |   |   |   |   |   | X | → | RAS | 
 
| N00545    | 
  |   |   |   |   |   |   |   |   |   |   |   | X | → | ERK | → | AP1 | ⇒ | MMP9 | 
 
| N00542    | 
EGF | → | EGFR | → | GRB2 | → | SOS | → | RAS | → | MEKK1 | → | MKK4 | → | JNK | 
 
| N00543    | 
  |   |   |   |   |   |   |   |   |   |   |   | X | → | JNK | → | JUN | 
 
| N00538    | 
  |   |   |   | Ca2+ | → | PTK2B | → | SRC | → | GRB2 | → | SOS | → | RAS | → | RAF | → | MEK | → | ERK | 
 
| N00539    | 
X | → | VDAC3 | → | Ca2+ | 
 
|   |  |  |  
| PI3K signaling |  
| N00033    | 
EGF | → | EGFR | → | PI3K | → | PIP3 | → | AKT | ⊣ | BAD | 
 
| N00267    | 
  |   | X | → | PI3K | 
 
|   |  |  |  
| TGFB signaling |  
| N00063    | 
  |   | TGFB | → | (TGFBR2+TGFBR1) | → | (SMAD2,SMAD3) | = | SMAD4 | 
 
| N00531    | 
X | → | TGFB | → | (TGFBR2+TGFBR1) | → | (SMAD2,SMAD3) | = | SMAD4 | 
 
|   |  |  |  
| JAK-STAT signaling |  
| N00053    | 
Cytokine | → | Receptor | → | JAK | → | STAT | ⇒ | PIM1 | 
 
| N00548    | 
  |   |   |   | X | → | STAT3 | 
 
|   |  |  |  
| TLR signaling |  
| N00435    | 
  |   | (TLR1,TLR2,TLR4) | → | (TIRAP+MYD88) | → | (IRAK4+IRAK1) | → | (TRAF6+TAK1+TAB2) | → | IKK | → | NFKBIA | → | NFKB | ⇒ | (TNF,IL6,IL12A,IL1.. | 
 
| N00556    | 
C | ⊣ | TLR2 | 
 
| N00557    | 
  |   | C | ⊣ | TIRAP | 
 
| N00549    | 
  |   | C | ⊣ | MYD88 | 
 
| N00550    | 
  |   |   |   |   |   |   |   |   |   |   |   | C | ⊣ | NFKB | 
 
| N00438    | 
  |   | (TLR2,TLR4) | → | (TIRAP+MYD88) | → | (IRAK4+IRAK1) | → | (TRAF6+TAK1+TAB2) | → | (MEK,MKK3/6,MKK4/7.. | → | (ERK,p38,JNK) | → | AP1 | 
 
| N00551    | 
  |   |   |   |   |   |   |   | S | ⊣ | JNK | 
 
| N00553    | 
  |   | TLR4 | → | TICAM2 | → | TICAM1 | → | TRAF3 | → | (IKBKE+TBK1) | → | (IRF3,IRF7) | ⇒ | IFNB1 | 
 
| N00554    | 
  |   | C | ⊣ | TICAM2 | 
 
| N00555    | 
  |   |   |   | C | ⊣ | TICAM1 | 
 
| N00149    | 
  |   |   |   | TLR3 | → | TICAM1 | → | TRAF3 | → | (IKBKE+TBK1) | → | IRF3 | → | (CREBBP,EP300) | ⇒ | IFNB1 | 
 
| N00552    | 
  |   |   |   |   |   | P | ⊣ | DDX3X | = | (IKBKE+TBK1) | 
 
|   |  |  |  
| RLR signaling |  
| N00469    | 
  |   | RNA | → | RIGI | → | MAVS | → | TRAF3 | → | (TANK+NAP1+SINTBAD.. | → | (TBK1+IKBKE) | → | (IRF7,IRF3) | ⇒ | (IFNA,IFNB1) | 
 
| N00268    | 
  |   |   |   | X | ⊣ | MAVS | 
 
|   |  |  |  
| IFN signaling |  
| N00150    | 
(IFNA,IFNB1) | → | (IFNAR1+IFNAR2) | → | (JAK1,TYK2) | → | (STAT1+STAT2+IRF9) | ⇒ | (IRF7,EIF2AK2) | 
 
| N00558    | 
  |   |   |   | P | ⊣ | (STAT1+STAT2) | 
 
|   |  |  |  
| Chemokine signaling |  
| N00546    | 
CXCL12 | → | CXCR4 | → | GNAQ | → | (PLCB,PLCG) | → | IP3 | → | Ca2+ | → | PKC | → | RAF | → | MEK | → | ERK | 
 
| N00547    | 
  |   |   |   |   |   |   |   |   |   | S | → | PKC | 
 
|   |  |  |  
| Cell cycle |  
| N00536    | 
CDKN2A | ⊣ | MDM2 | ⊣ | TP53 | ⇒ | CDKN1A | ⊣ | (CCNE+CDK2) | → | RB1 | ⌿ | E2F | 
 
| N00537    | 
  |   |   |   |   |   | X | → | (CCNE+CDK2) | → | RB1 | ⌿ | E2F | 
 
|   |  |  |  
| Apoptosis |  
| N00146    | 
(FASLG,TNFSF10) | → | (FAS,TNFRSF10B) | → | FADD | → | (CASP8,CASP10) | → | BID | → | (BAX,BAK1) | → | CYCS | = | APAF1 | → | CASP9 | → | (CASP3,CASP7) | 
 
| N00534    | 
  |   |   |   |   |   |   |   | X | → | BAX | 
 
| N00533    | 
  |   |   |   |   |   |   |   |   |   |   |   | X | → | BIRC5 | ⊣ | CASP9 | 
 
|   |  |  |  
| Transcription |  
| N00532    | 
X | → | (EGR2,EGR3) | = | EP300 | ⇒ | FASLG | 
 
| N00535    | 
X | ⊣ | TP53 | ⇒ | (CDKN1A,BAX,FAS) | 
 
| N00544    | 
X | → | CREBBP | = | (CREB+ATF2) | ⇒ | (CXCL8,PCNA) | 
 
 
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