KEGG   PATHWAY: apla05164
Entry
apla05164                   Pathway                                
Name
Influenza A - Anas platyrhynchos (mallard)
Description
Influenza is a contagious respiratory disease caused by influenza virus infection. Influenza A virus is responsible for both annual seasonal epidemics and periodic worldwide pandemics. Novel strains that cause pandemics arise from avian influenza virus by genetic reassortment among influenza viruses and two surface glycoproteins HA and NA form the basis of serologically distinct virus types. The innate immune system recognizes invaded virus through multiple mechanisms. Viral non-structural NS1 protein is a multifunctional virulence factor that interfere IFN-mediated antiviral response. It inhibits IFN production by blocking activation of transcription factors such as NF-kappa B and IRF3. NS1 further inhibits the activation of IFN-induced antiviral genes. PB1-F2 protein is another virulence factor that induce apoptosis of infected cells, which results in life-threatening bronchiolitis.
Class
Human Diseases; Infectious disease: viral
Pathway map
apla05164  Influenza A
apla05164

Organism
Anas platyrhynchos (mallard) [GN:apla]
Gene
113839591  plasminogen [KO:K01315] [EC:3.4.21.7]
101794192  LOW QUALITY PROTEIN: plasminogen [KO:K01315] [EC:3.4.21.7]
101792988  trypsin I-P1 precursor [KO:K01312] [EC:3.4.21.4]
113842430  trypsin II-P29-like [KO:K01312] [EC:3.4.21.4]
113842431  trypsin II-P29 [KO:K01312] [EC:3.4.21.4]
113842434  trypsin II-P29-like [KO:K01312] [EC:3.4.21.4]
119718245  trypsin II-P29-like [KO:K01312] [EC:3.4.21.4]
101793783  TMPRSS2; transmembrane protease serine 2 [KO:K09633] [EC:3.4.21.122]
101795433  TMPRSS4; transmembrane protease serine 4 [KO:K09635] [EC:3.4.21.-]
101799551  PRKCB; protein kinase C beta type isoform X1 [KO:K19662] [EC:2.7.11.13]
101800595  RNASEL; 2-5A-dependent ribonuclease isoform X1 [KO:K01165]
119718226  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 1-like [KO:K09507]
101791806  DNAJC3; dnaJ homolog subfamily C member 3 [KO:K09523]
110353866  EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 [KO:K16195] [EC:2.7.11.1]
101803281  EIF2S1; eukaryotic translation initiation factor 2 subunit 1 [KO:K03237]
101791574  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 isoform X1 [KO:K10652] [EC:2.3.2.27]
101789567  DDX58; antiviral innate immune response receptor RIG-I [KO:K12646] [EC:5.6.2.6]
101800076  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
101790490  NLRX1; NLR family member X1 [KO:K12653]
101794527  MAVS; mitochondrial antiviral-signaling protein [KO:K12648]
119717337  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
101790255  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
101791396  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
101803431  NFKB1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
101797184  CALCOCO2; calcium-binding and coiled-coil domain-containing protein 2 [KO:K21348]
101790771  TLR3; toll-like receptor 3 precursor [KO:K05401]
101791305  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
101796752  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
101800085  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
101800153  IKBKE; LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
101796241  EP300; histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
101800809  LOW QUALITY PROTEIN: CREB-binding protein [KO:K04498] [EC:2.3.1.48]
101799388  TLR4; toll-like receptor 4 precursor [KO:K10160]
101797264  TLR7; toll-like receptor 7 isoform X1 [KO:K05404]
101797621  MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729]
101794110  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
101795904  IRF7; interferon regulatory factor 7 isoform X1 [KO:K09447]
101798321  IL6; interleukin-6 [KO:K05405]
113844483  IL12A; interleukin-12 subunit alpha [KO:K05406]
101800211  IL12B; LOW QUALITY PROTEIN: interleukin-12 subunit beta [KO:K05425]
101803817  interleukin-8 [KO:K10030]
106014932  interleukin-8-like isoform X1 [KO:K10030]
101804010  IL8; interleukin-8 precursor [KO:K10030]
101800620  CCL26; C-C motif chemokine 26 precursor [KO:K12499]
101798847  interferon alpha-2 [KO:K05414]
101796052  interferon-like precursor [KO:K05414]
113840164  interferon-like [KO:K05415]
113840166  interferon [KO:K05415]
101790975  IFNAR1; interferon alpha/beta receptor 1 [KO:K05130]
101804315  IFNAR2; interferon alpha/beta receptor 2 isoform X1 [KO:K05131]
101794879  JAK1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
101791200  SOCS3; suppressor of cytokine signaling 3 [KO:K04696]
101795022  STAT1; signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220]
119714613  STAT2; signal transducer and activator of transcription 2 [KO:K11221]
101793492  interferon-induced GTP-binding protein Mx [KO:K14754]
101796198  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
101796105  protein PML isoform X3 [KO:K10054] [EC:2.3.2.-]
113844857  PML; LOW QUALITY PROTEIN: protein PML [KO:K10054] [EC:2.3.2.-]
101790439  IFNG; interferon gamma precursor [KO:K04687]
101799854  IFNGR1; LOW QUALITY PROTEIN: interferon gamma receptor 1 [KO:K05132]
101790789  IFNGR2; interferon gamma receptor 2 [KO:K05133]
101799651  JAK2; tyrosine-protein kinase JAK2 [KO:K04447] [EC:2.7.10.2]
101803334  CIITA; MHC class II transactivator isoform X3 [KO:K08060] [EC:2.7.11.1]
101804125  class II histocompatibility antigen, M alpha chain [KO:K06752]
119718679  HLA class II histocompatibility antigen, DM beta chain-like isoform X1 [KO:K06752]
119715062  HLA class II histocompatibility antigen, DM beta chain-like [KO:K06752]
119718678  class II histocompatibility antigen, B-L beta chain-like isoform X1 [KO:K06752]
119718708  class II histocompatibility antigen, B-L beta chain-like isoform X1 [KO:K06752]
119718710  class II histocompatibility antigen, B-L beta chain-like isoform X1 [KO:K06752]
101789604  class II histocompatibility antigen, B-L beta chain precursor [KO:K06752]
101789899  caspase-1 isoform X1 [KO:K01370] [EC:3.4.22.36]
101802715  IL18; interleukin-18 [KO:K05482]
101803461  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
101799717  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X2 [KO:K02649]
101795759  LOW QUALITY PROTEIN: phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649]
101796183  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
101800900  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
101802796  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
101804556  AKT3; RAC-gamma serine/threonine-protein kinase isoform X2 [KO:K04456] [EC:2.7.11.1]
101800458  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
101790685  CCND3; G1/S-specific cyclin-D3 [KO:K10152]
101793324  CDK6; cyclin-dependent kinase 6 isoform X1 [KO:K02091] [EC:2.7.11.22]
101797713  TNFSF10; tumor necrosis factor ligand superfamily member 10 isoform X1 [KO:K04721]
101799861  tumor necrosis factor receptor superfamily member 10A [KO:K04722]
119713491  tumor necrosis factor receptor superfamily member 10B-like isoform X1 [KO:K04722]
101801884  FASLG; tumor necrosis factor ligand superfamily member 6 [KO:K04389]
101796331  FAS; tumor necrosis factor receptor superfamily member 6 [KO:K04390]
101801004  TNFRSF1A; tumor necrosis factor receptor superfamily member 1A [KO:K03158]
101799807  TRADD; LOW QUALITY PROTEIN: tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
101801863  FADD; FAS-associated death domain protein [KO:K02373]
101803161  caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
106014283  caspase-8 [KO:K04398] [EC:3.4.22.61]
101805365  BID; BH3-interacting domain death agonist [KO:K04726]
101789424  BAK1; bcl-2 homologous antagonist/killer [KO:K14021]
101803948  VDAC1; voltage-dependent anion-selective channel protein 1 [KO:K05862]
101794225  SLC25A4; ADP/ATP translocase 1 [KO:K05863]
101799034  ADP/ATP translocase 3 [KO:K05863]
101791414  SLC25A5; ADP/ATP translocase 2 [KO:K05863]
119716478  ADP/ATP translocase 3-like [KO:K05863]
113841161  cytochrome c [KO:K08738]
101799443  APAF1; apoptotic protease-activating factor 1 isoform X1 [KO:K02084]
101795386  CASP9; caspase-9 [KO:K04399] [EC:3.4.22.62]
101805296  CASP3; caspase-3 [KO:K02187] [EC:3.4.22.56]
101804883  CPSF4; cleavage and polyadenylation specificity factor subunit 4 [KO:K14404]
101791322  PABPN1L; LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein 2 [KO:K14396]
119715097  NXF1; nuclear RNA export factor 1 [KO:K14284]
101799293  NXT2; NTF2-related export protein 2 isoform X4 [KO:K14285]
101793929  RAE1; mRNA export factor isoform X1 [KO:K14298]
101800274  NUP98; nuclear pore complex protein Nup98-Nup96 isoform X1 [KO:K14297]
101791352  RSAD2; radical S-adenosyl methionine domain-containing protein 2 precursor [KO:K15045]
119713762  FDPS; farnesyl pyrophosphate synthase [KO:K00787] [EC:2.5.1.1 2.5.1.10]
101802546  PRKCA; protein kinase C alpha type isoform X3 [KO:K02677] [EC:2.7.11.13]
101795633  RAF1; RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
101791037  MAP2K1; LOW QUALITY PROTEIN: dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
119714201  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 isoform X1 [KO:K04369] [EC:2.7.12.2]
101800319  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
101800437  ACTB; actin, cytoplasmic 1 [KO:K05692]
119713181  ACTG1; LOW QUALITY PROTEIN: actin, cytoplasmic 2 [KO:K05692]
101792739  actin, cytoplasmic type 5 [KO:K05692]
101805319  RAB11A; ras-related protein Rab-11A [KO:K07904]
101800252  ras-related protein Rab-11A-like [KO:K07904]
101796061  RAB11B; ras-related protein Rab-11B [KO:K07905]
101802549  XPO1; exportin-1 isoform X1 [KO:K14290]
101799266  KPNA1; importin subunit alpha-5 [KO:K23940]
101805178  KPNA2; importin subunit alpha-1 [KO:K15043]
101790994  KPNA7; importin subunit alpha-8 [KO:K15043]
101790858  KPNA5; importin subunit alpha-6 [KO:K15042]
119713653  KPNA6; importin subunit alpha-7 isoform X1 [KO:K15042]
Compound
C00027  Hydrogen peroxide
C00080  H+
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Edinger TO, Pohl MO, Stertz S
  Title
Entry of influenza A virus: host factors and antiviral targets.
  Journal
J Gen Virol 95:263-77 (2014)
DOI:10.1099/vir.0.059477-0
Reference
  Authors
Kido H, Okumura Y, Takahashi E, Pan HY, Wang S, Chida J, Le TQ, Yano M
  Title
Host envelope glycoprotein processing proteases are indispensable for entry into human cells by seasonal and highly pathogenic avian influenza viruses.
  Journal
J Mol Genet Med 3:167-75 (2008)
Reference
  Authors
Ramakrishnan B, Viswanathan K, Tharakaraman K, Dancik V, Raman R, Babcock GJ, Shriver Z, Sasisekharan R
  Title
A Structural and Mathematical Modeling Analysis of the Likelihood of Antibody-Dependent Enhancement in Influenza.
  Journal
Trends Microbiol 24:933-943 (2016)
DOI:10.1016/j.tim.2016.09.003
Reference
  Authors
Thanh TT, van Doorn HR, de Jong MD
  Title
Human H5N1 influenza: current insight into pathogenesis.
  Journal
Int J Biochem Cell Biol 40:2671-4 (2008)
DOI:10.1016/j.biocel.2008.05.019
Reference
  Authors
Michael P, Brabant D, Bleiblo F, Ramana CV, Rutherford M, Khurana S, Tai TC, Kumar A, Kumar A
  Title
Influenza A induced cellular signal transduction pathways.
  Journal
J Thorac Dis 5 Suppl 2:S132-41 (2013)
DOI:10.3978/j.issn.2072-1439.2013.07.42
Reference
  Authors
Hale BG, Albrecht RA, Garcia-Sastre A
  Title
Innate immune evasion strategies of influenza viruses.
  Journal
Future Microbiol 5:23-41 (2010)
DOI:10.2217/fmb.09.108
Reference
  Authors
Sharma K, Tripathi S, Ranjan P, Kumar P, Garten R, Deyde V, Katz JM, Cox NJ, Lal RB, Sambhara S, Lal SK
  Title
Influenza A virus nucleoprotein exploits Hsp40 to inhibit PKR activation.
  Journal
PLoS One 6:e20215 (2011)
DOI:10.1371/journal.pone.0020215
Reference
  Authors
Ehrhardt C, Seyer R, Hrincius ER, Eierhoff T, Wolff T, Ludwig S
  Title
Interplay between influenza A virus and the innate immune signaling.
  Journal
Microbes Infect 12:81-7 (2010)
DOI:10.1016/j.micinf.2009.09.007
Reference
  Authors
van de Sandt CE, Kreijtz JH, Rimmelzwaan GF
  Title
Evasion of influenza A viruses from innate and adaptive immune responses.
  Journal
Viruses 4:1438-76 (2012)
DOI:10.3390/v4091438
Reference
  Authors
Long JS, Mistry B, Haslam SM, Barclay WS
  Title
Host and viral determinants of influenza A virus species specificity.
  Journal
Nat Rev Microbiol 17:67-81 (2019)
DOI:10.1038/s41579-018-0115-z
Reference
  Authors
Chen X, Liu S, Goraya MU, Maarouf M, Huang S, Chen JL
  Title
Host Immune Response to Influenza A Virus Infection.
  Journal
Front Immunol 9:320 (2018)
DOI:10.3389/fimmu.2018.00320
Reference
  Authors
Lu X, Masic A, Li Y, Shin Y, Liu Q, Zhou Y
  Title
The PI3K/Akt pathway inhibits influenza A virus-induced Bax-mediated apoptosis by negatively regulating the JNK pathway via ASK1.
  Journal
J Gen Virol 91:1439-49 (2010)
DOI:10.1099/vir.0.018465-0
Reference
  Authors
Ichinohe T, Iwasaki A, Hasegawa H
  Title
Innate sensors of influenza virus: clues to developing better intranasal vaccines.
  Journal
Expert Rev Vaccines 7:1435-45 (2008)
DOI:10.1586/14760584.7.9.1435
Reference
  Authors
Le Sage V, Cinti A, Amorim R, Mouland AJ
  Title
Adapting the Stress Response: Viral Subversion of the mTOR Signaling Pathway.
  Journal
Viruses 8:E152 (2016)
DOI:10.3390/v8060152
Reference
  Authors
Fan Y, Sanyal S, Bruzzone R
  Title
Breaking Bad: How Viruses Subvert the Cell Cycle.
  Journal
Front Cell Infect Microbiol 8:396 (2018)
DOI:10.3389/fcimb.2018.00396
Reference
  Authors
Varga ZT, Palese P
  Title
The influenza A virus protein PB1-F2: killing two birds with one stone?
  Journal
Virulence 2:542-6 (2011)
DOI:10.4161/viru.2.6.17812
Reference
  Authors
Atkin-Smith GK, Duan M, Chen W, Poon IKH
  Title
The induction and consequences of Influenza A virus-induced cell death.
  Journal
Cell Death Dis 9:1002 (2018)
DOI:10.1038/s41419-018-1035-6
Reference
  Authors
Nogales A, Martinez-Sobrido L, Topham DJ, DeDiego ML
  Title
Modulation of Innate Immune Responses by the Influenza A NS1 and PA-X Proteins.
  Journal
Viruses 10:E708 (2018)
DOI:10.3390/v10120708
Reference
  Authors
Dai X, Zhang L, Hong T
  Title
Host cellular signaling induced by influenza virus.
  Journal
Sci China Life Sci 54:68-74 (2011)
DOI:10.1007/s11427-010-4116-z
Reference
  Authors
Li J, Yu M, Zheng W, Liu W
  Title
Nucleocytoplasmic shuttling of influenza A virus proteins.
  Journal
Viruses 7:2668-82 (2015)
DOI:10.3390/v7052668
Reference
  Authors
Dou D, Revol R, Ostbye H, Wang H, Daniels R
  Title
Influenza A Virus Cell Entry, Replication, Virion Assembly and Movement.
  Journal
Front Immunol 9:1581 (2018)
DOI:10.3389/fimmu.2018.01581
Reference
  Authors
Paterson D, Fodor E
  Title
Emerging roles for the influenza A virus nuclear export protein (NEP).
  Journal
PLoS Pathog 8:e1003019 (2012)
DOI:10.1371/journal.ppat.1003019
Related
pathway
apla00900  Terpenoid backbone biosynthesis
apla03013  Nucleocytoplasmic transport
apla03015  mRNA surveillance pathway
apla04010  MAPK signaling pathway
apla04110  Cell cycle
apla04144  Endocytosis
apla04210  Apoptosis
apla04620  Toll-like receptor signaling pathway
apla04621  NOD-like receptor signaling pathway
apla04622  RIG-I-like receptor signaling pathway
KO pathway
ko05164   
LinkDB

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