Entry
Name
Cellular senescence - Hippoglossus stenolepis (Pacific halibut)
Description
Cellular senescence is a state of irreversible cellular arrest and can be triggered by a number of factors, such as telomere shortening, oncogene activation, irradiation, DNA damage and oxidative stress. It is characterized by enlarged flattened morphology, senescence-associated beta-galactosidase (SA-b-gal) activity, secretion of inflammatory cytokines, growth factors and matrix metalloproteinases, as part of the senescence-associated secretory phenotype (SASP). Cellular senescence is functionally associated with many biological processes including aging, tumor suppression, placental biology, embryonic development, and wound healing.
Class
Cellular Processes; Cell growth and death
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Hippoglossus stenolepis (Pacific halibut) [GN:
hsp ]
Gene
118099356 transforming growth factor beta-3 proprotein isoform X1 [KO:K13377 ]
118106261 pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922 ] [EC:2.7.1.153 ]
118111369 pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922 ] [EC:2.7.1.153 ]
118114686 phosphatidylinositol 3-kinase regulatory subunit alpha-like isoform X1 [KO:K02649 ]
118117905 phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649 ]
118117936 pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649 ]
118120979 pik3r3b; phosphoinositide-3-kinase, regulatory subunit 3b (gamma) isoform X1 [KO:K02649 ]
118125392 pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649 ]
118120902 phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649 ]
118105387 cdkn1a; cyclin-dependent kinase inhibitor 1 isoform X1 [KO:K06625 ]
118125177 BOLA class I histocompatibility antigen, alpha chain BL3-7 [KO:K06751 ]
118125178 LOW QUALITY PROTEIN: BOLA class I histocompatibility antigen, alpha chain BL3-7-like [KO:K06751 ]
118124636 BOLA class I histocompatibility antigen, alpha chain BL3-7 [KO:K06751 ]
118122338 LOW QUALITY PROTEIN: H-2 class I histocompatibility antigen, Q9 alpha chain [KO:K06751 ]
118122500 LOW QUALITY PROTEIN: H-2 class I histocompatibility antigen, Q9 alpha chain [KO:K06751 ]
124851125 LOW QUALITY PROTEIN: major histocompatibility complex class I-related gene protein [KO:K06751 ]
118124626 LOW QUALITY PROTEIN: major histocompatibility complex class I-related gene protein [KO:K06751 ]
118124642 major histocompatibility complex class I-related gene protein-like isoform X1 [KO:K06751 ]
118124682 major histocompatibility complex class I-related gene protein-like [KO:K06751 ]
124851132 major histocompatibility complex class I-related gene protein-like isoform X1 [KO:K06751 ]
118105437 mybl2b; v-myb avian myeloblastosis viral oncogene homolog-like 2b isoform X1 [KO:K21769 ]
118112053 fbxw11a; F-box and WD repeat domain-containing 11-A isoform X1 [KO:K03362 ]
118098216 gadd45gb.1; growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1 [KO:K04402 ]
118098217 growth arrest and DNA damage-inducible protein GADD45 gamma [KO:K04402 ]
118115579 gadd45ga; growth arrest and DNA-damage-inducible, gamma a [KO:K04402 ]
118115882 growth arrest and DNA damage-inducible protein GADD45 beta [KO:K04402 ]
118118323 gadd45aa; growth arrest and DNA-damage-inducible, alpha, a [KO:K04402 ]
118121000 gadd45ab; growth arrest and DNA-damage-inducible, alpha, b [KO:K04402 ]
118121018 growth arrest and DNA damage-inducible protein GADD45 beta [KO:K04402 ]
118102255 serpine1; LOW QUALITY PROTEIN: plasminogen activator inhibitor 1 [KO:K03982 ]
118115008 eukaryotic translation initiation factor 4E-binding protein 2 [KO:K07205 ]
118125727 eukaryotic translation initiation factor 4E-binding protein 1 [KO:K07205 ]
118118962 zfp36l2; mRNA decay activator protein ZFP36L2 isoform X1 [KO:K18753 ]
118111329 cacna1db; voltage-dependent L-type calcium channel subunit alpha-1D isoform X1 [KO:K04851 ]
118105190 cacna1da; calcium channel, voltage-dependent, L type, alpha 1D subunit, a [KO:K04851 ]
118115642 trpv4; transient receptor potential cation channel subfamily V member 4 [KO:K04973 ]
118105808 trpm7; transient receptor potential cation channel subfamily M member 7 isoform X1 [KO:K04982 ] [EC:2.7.11.1 ]
118121862 ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
118102577 serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
118112713 ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
118114042 nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446 ]
118125071 nfatc1; nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446 ]
118110914 nfatc2a; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332 ]
118109638 nfatc3b; nuclear factor of activated T-cells, cytoplasmic 3 [KO:K17333 ]
118110108 nfatc3a; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333 ]
118118435 nfatc4; nuclear factor of activated T-cells, cytoplasmic 4 isoform X1 [KO:K17334 ]
118104834 itpr1b; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
118105042 inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
118109898 itpr2; inositol 1,4,5-trisphosphate receptor type 2 isoform X1 [KO:K04959 ]
118122322 vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
118119002 vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
118114625 vdac3; voltage-dependent anion-selective channel protein 3 isoform X1 [KO:K15041 ]
118125628 zgc:56235; voltage-dependent anion-selective channel protein 2-like isoform X1 [KO:K15041 ]
124854553 mcu; calcium uniporter protein, mitochondrial isoform X1 [KO:K20858 ]
Compound
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Munoz-Espin D, Serrano M
Title
Cellular senescence: from physiology to pathology.
Journal
Reference
Authors
Childs BG, Durik M, Baker DJ, van Deursen JM
Title
Cellular senescence in aging and age-related disease: from mechanisms to therapy.
Journal
Reference
Authors
Sharpless NE, Sherr CJ
Title
Forging a signature of in vivo senescence.
Journal
Reference
Authors
Fridlyanskaya I, Alekseenko L, Nikolsky N
Title
Senescence as a general cellular response to stress: A mini-review.
Journal
Reference
Authors
Lujambio A
Title
To clear, or not to clear (senescent cells)? That is the question.
Journal
Reference
Authors
Di Mitri D, Alimonti A
Title
Non-Cell-Autonomous Regulation of Cellular Senescence in Cancer.
Journal
Reference
Authors
Francica P, Aebersold DM, Medova M
Title
Senescence as biologic endpoint following pharmacological targeting of receptor tyrosine kinases in cancer.
Journal
Reference
Authors
Bartling B
Title
Cellular senescence in normal and premature lung aging.
Journal
Reference
Authors
Munoz-Espin D, Canamero M, Maraver A, Gomez-Lopez G, Contreras J, Murillo-Cuesta S, Rodriguez-Baeza A, Varela-Nieto I, Ruberte J, Collado M, Serrano M
Title
Programmed cell senescence during mammalian embryonic development.
Journal
Reference
Authors
Herranz N, Gallage S, Gil J
Title
TORn about SASP regulation.
Journal
Reference
Authors
Martin N, Bernard D
Title
Calcium signaling and cellular senescence.
Journal
Reference
Authors
Farfariello V, Iamshanova O, Germain E, Fliniaux I, Prevarskaya N
Title
Calcium homeostasis in cancer: A focus on senescence.
Journal
Reference
Authors
McCarthy DA, Clark RR, Bartling TR, Trebak M, Melendez JA
Title
Redox control of the senescence regulator interleukin-1alpha and the secretory phenotype.
Journal
Reference
Authors
Donninger H, Schmidt ML, Mezzanotte J, Barnoud T, Clark GJ
Title
Ras signaling through RASSF proteins.
Journal
Reference
Authors
Barnoud T, Schmidt ML, Donninger H, Clark GJ
Title
The role of the NORE1A tumor suppressor in Oncogene-Induced Senescence.
Journal
Reference
Authors
Kang C, Xu Q, Martin TD, Li MZ, Demaria M, Aron L, Lu T, Yankner BA, Campisi J, Elledge SJ
Title
The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4.
Journal
Reference
Authors
Cao X, Li M
Title
A New Pathway for Senescence Regulation.
Journal
Reference
Authors
Gire V, Dulic V
Title
Senescence from G2 arrest, revisited.
Journal
Reference
Authors
Mowla SN, Lam EW, Jat PS
Title
Cellular senescence and aging: the role of B-MYB.
Journal
Reference
Authors
Yao H, Chung S, Hwang JW, Rajendrasozhan S, Sundar IK, Dean DA, McBurney MW, Guarente L, Gu W, Ronty M, Kinnula VL, Rahman I
Title
SIRT1 protects against emphysema via FOXO3-mediated reduction of premature senescence in mice.
Journal
Reference
Authors
Hwang JW, Yao H, Caito S, Sundar IK, Rahman I
Title
Redox regulation of SIRT1 in inflammation and cellular senescence.
Journal
Related pathway
KO pathway
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