KEGG   PATHWAY: shab05164
Entry
shab05164                   Pathway                                
Name
Influenza A - Strigops habroptila (Kakapo)
Description
Influenza is a contagious respiratory disease caused by influenza virus infection. Influenza A virus is responsible for both annual seasonal epidemics and periodic worldwide pandemics. Novel strains that cause pandemics arise from avian influenza virus by genetic reassortment among influenza viruses and two surface glycoproteins HA and NA form the basis of serologically distinct virus types. The innate immune system recognizes invaded virus through multiple mechanisms. Viral non-structural NS1 protein is a multifunctional virulence factor that interfere IFN-mediated antiviral response. It inhibits IFN production by blocking activation of transcription factors such as NF-kappa B and IRF3. NS1 further inhibits the activation of IFN-induced antiviral genes. PB1-F2 protein is another virulence factor that induce apoptosis of infected cells, which results in life-threatening bronchiolitis.
Class
Human Diseases; Infectious disease: viral
Pathway map
shab05164  Influenza A
shab05164

Organism
Strigops habroptila (Kakapo) [GN:shab]
Gene
115613679  plasminogen-like [KO:K01315] [EC:3.4.21.7]
115613680  plasminogen-like [KO:K01315] [EC:3.4.21.7]
115601507  trypsin I-P1-like [KO:K01312] [EC:3.4.21.4]
115603362  trypsin-like [KO:K01312] [EC:3.4.21.4]
115604218  TMPRSS2; transmembrane protease serine 2 isoform X1 [KO:K09633] [EC:3.4.21.122]
115616375  TMPRSS4; transmembrane protease serine 4 isoform X1 [KO:K09635] [EC:3.4.21.-]
115606584  PRKCB; protein kinase C beta type isoform X1 [KO:K19662] [EC:2.7.11.13]
115611871  RNASEL; 2-5A-dependent ribonuclease isoform X1 [KO:K01165]
115604609  DNAJC3; dnaJ homolog subfamily C member 3 isoform X1 [KO:K09523]
115613970  EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 [KO:K16195] [EC:2.7.11.1]
115606298  EIF2S1; eukaryotic translation initiation factor 2 subunit 1 [KO:K03237]
115616857  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 isoform X1 [KO:K10652] [EC:2.3.2.27]
115619851  DDX58; probable ATP-dependent RNA helicase DDX58 [KO:K12646] [EC:5.6.2.6]
115608507  IFIH1; interferon-induced helicase C domain-containing protein 1 isoform X1 [KO:K12647] [EC:5.6.2.6]
115616394  NLRX1; NLR family member X1 [KO:K12653]
115610309  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
115609102  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
115618527  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
115603347  NFKBIB; NF-kappa-B inhibitor beta isoform X1 [KO:K02581]
115607032  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
115610509  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
115603474  RELA; LOW QUALITY PROTEIN: transcription factor p65 [KO:K04735]
115617887  CALCOCO2; calcium-binding and coiled-coil domain-containing protein 2 isoform X1 [KO:K21348]
115610386  TLR3; toll-like receptor 3 isoform X1 [KO:K05401]
115618270  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
115606790  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
115605208  TBK1; serine/threonine-protein kinase TBK1 isoform X1 [KO:K05410] [EC:2.7.11.10]
115602454  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
115605946  EP300; histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
115607485  CREBBP; CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
115617148  TLR4; toll-like receptor 4 [KO:K10160]
115603144  TLR7; toll-like receptor 7 [KO:K05404]
115609931  MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729]
115605130  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
115607732  IRF7; interferon regulatory factor 7 [KO:K09447]
115618514  interleukin-1 beta-like isoform X1 [KO:K04519]
115607542  IL6; interleukin-6 [KO:K05405]
115612199  IL12A; interleukin-12 subunit alpha [KO:K05406]
115615709  IL12B; interleukin-12 subunit beta isoform X1 [KO:K05425]
115605011  interleukin-8-like [KO:K10030]
115605013  interleukin-8-like [KO:K10030]
115605339  interleukin-8-like [KO:K10030]
115603142  C-C motif chemokine 5-like [KO:K12499]
115600831  IFNK; LOW QUALITY PROTEIN: interferon kappa [KO:K05414]
115619639  interferon alpha-2-like [KO:K05414]
115619468  interferon-like [KO:K05415]
115619469  interferon-like [KO:K05415]
115619470  interferon-like [KO:K05415]
115619471  interferon-like [KO:K05415]
115604031  IFNAR1; LOW QUALITY PROTEIN: interferon alpha/beta receptor 1 [KO:K05130]
115603846  IFNAR2; interferon alpha/beta receptor 2 [KO:K05131]
115611271  JAK1; tyrosine-protein kinase JAK1 isoform X1 [KO:K11217] [EC:2.7.10.2]
115603418  TYK2; non-receptor tyrosine-protein kinase TYK2 isoform X1 [KO:K11219] [EC:2.7.10.2]
115616572  SOCS3; suppressor of cytokine signaling 3 [KO:K04696]
115608872  STAT1; signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220]
115618700  STAT2; LOW QUALITY PROTEIN: signal transducer and activator of transcription 2 [KO:K11221]
115603870  interferon-induced GTP-binding protein Mx-like [KO:K14754]
115602570  ADAR; double-stranded RNA-specific adenosine deaminase [KO:K12968] [EC:3.5.4.37]
115613245  protein PML-like isoform X1 [KO:K10054] [EC:2.3.2.-]
115605193  IFNG; interferon gamma [KO:K04687]
115609451  IFNGR1; interferon gamma receptor 1 isoform X1 [KO:K05132]
115601539  IFNGR2; interferon gamma receptor 2 [KO:K05133]
115601317  JAK2; tyrosine-protein kinase JAK2 isoform X1 [KO:K04447] [EC:2.7.10.2]
115607405  CIITA; LOW QUALITY PROTEIN: MHC class II transactivator [KO:K08060] [EC:2.7.11.1]
115618851  class II histocompatibility antigen, B-L beta chain-like [KO:K06752]
115618852  HLA class II histocompatibility antigen, DR alpha chain-like [KO:K06752]
115618838  class II histocompatibility antigen, M beta 1 chain-like [KO:K06752]
115607697  NLRP6; NACHT, LRR and PYD domains-containing protein 6 [KO:K12800]
115602746  PYCARD; apoptosis-associated speck-like protein containing a CARD [KO:K12799]
115603126  caspase-1-like isoform X1 [KO:K01370] [EC:3.4.22.36]
115616293  IL18; interleukin-18 isoform X1 [KO:K05482]
115611400  phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
115618216  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
115619483  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
115611164  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
115611766  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
115617305  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
115606664  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
115613872  AKT3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
115603334  AKT2; RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
115602480  CCND3; G1/S-specific cyclin-D3 isoform X1 [KO:K10152]
115614612  CDK6; cyclin-dependent kinase 6 [KO:K02091] [EC:2.7.11.22]
115611740  TNFSF10; tumor necrosis factor ligand superfamily member 10 isoform X1 [KO:K04721]
115618487  tumor necrosis factor receptor superfamily member 10B-like isoform X1 [KO:K04722]
115612049  FASLG; tumor necrosis factor ligand superfamily member 6 [KO:K04389]
115608918  FAS; tumor necrosis factor receptor superfamily member 6 [KO:K04390]
115601685  TNFRSF1A; tumor necrosis factor receptor superfamily member 1A isoform X1 [KO:K03158]
115618941  tumor necrosis factor receptor type 1-associated DEATH domain protein-like [KO:K03171]
115619674  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171]
115607147  FADD; FAS-associated death domain protein [KO:K02373]
115607876  caspase-8-like [KO:K04398] [EC:3.4.22.61]
115608040  caspase-8-like isoform X1 [KO:K04398] [EC:3.4.22.61]
115605319  BID; BH3-interacting domain death agonist [KO:K04726]
115602910  BAX; apoptosis regulator BAX [KO:K02159]
115602411  BAK1; bcl-2 homologous antagonist/killer [KO:K14021]
115615798  VDAC1; voltage-dependent anion-selective channel protein 1 [KO:K05862]
115610928  SLC25A4; ADP/ATP translocase 1 [KO:K05863]
115613083  SLC25A5; ADP/ATP translocase 2 isoform X1 [KO:K05863]
115604309  SLC25A6; ADP/ATP translocase 3 [KO:K05863]
115607984  cytochrome c [KO:K08738]
115605784  APAF1; apoptotic protease-activating factor 1 [KO:K02084]
115617332  CASP9; caspase-9 [KO:K04399] [EC:3.4.22.62]
115610967  CASP3; caspase-3 [KO:K02187] [EC:3.4.22.56]
115616839  CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein [KO:K14404]
115606810  CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 [KO:K14404]
115619724  PABPN1L; embryonic polyadenylate-binding protein 2 [KO:K14396]
115603312  PABPN1; polyadenylate-binding protein 2 [KO:K14396]
115602980  NXF1; nuclear RNA export factor 1 isoform X1 [KO:K14284]
115613253  NXT2; NTF2-related export protein 2 isoform X1 [KO:K14285]
115603254  HNRNPUL1; heterogeneous nuclear ribonucleoprotein U-like protein 1 [KO:K15047]
115615278  RAE1; mRNA export factor [KO:K14298]
115602219  NUP98; nuclear pore complex protein Nup98-Nup96 [KO:K14297]
115609532  RSAD2; radical S-adenosyl methionine domain-containing protein 2 [KO:K15045]
115602551  FDPS; farnesyl pyrophosphate synthase [KO:K00787] [EC:2.5.1.1 2.5.1.10]
115616723  PRKCA; protein kinase C alpha type [KO:K02677] [EC:2.7.11.13]
115614046  RAF1; RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
115612648  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
115618167  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 [KO:K04369] [EC:2.7.12.2]
115614282  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
115616751  ACTG1; actin, cytoplasmic 2 [KO:K05692]
115612443  actin, cytoplasmic type 5 [KO:K05692]
115606888  ACTB; actin, cytoplasmic 1 [KO:K05692]
115612681  RAB11A; ras-related protein Rab-11A [KO:K07904]
115602598  ras-related protein Rab-11A-like [KO:K07904]
115618106  RAB11B; ras-related protein Rab-11B [KO:K07905]
115609698  XPO1; exportin-1 isoform X1 [KO:K14290]
115601690  KPNA1; importin subunit alpha-5 [KO:K23940]
115616724  KPNA2; importin subunit alpha-1 isoform X1 [KO:K15043]
115606805  KPNA7; importin subunit alpha-8 [KO:K15043]
115609221  KPNA5; importin subunit alpha-6 isoform X1 [KO:K15042]
115616095  KPNA6; importin subunit alpha-7 isoform X1 [KO:K15042]
Compound
C00027  Hydrogen peroxide
C00080  H+
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Edinger TO, Pohl MO, Stertz S
  Title
Entry of influenza A virus: host factors and antiviral targets.
  Journal
J Gen Virol 95:263-77 (2014)
DOI:10.1099/vir.0.059477-0
Reference
  Authors
Kido H, Okumura Y, Takahashi E, Pan HY, Wang S, Chida J, Le TQ, Yano M
  Title
Host envelope glycoprotein processing proteases are indispensable for entry into human cells by seasonal and highly pathogenic avian influenza viruses.
  Journal
J Mol Genet Med 3:167-75 (2008)
Reference
  Authors
Ramakrishnan B, Viswanathan K, Tharakaraman K, Dancik V, Raman R, Babcock GJ, Shriver Z, Sasisekharan R
  Title
A Structural and Mathematical Modeling Analysis of the Likelihood of Antibody-Dependent Enhancement in Influenza.
  Journal
Trends Microbiol 24:933-943 (2016)
DOI:10.1016/j.tim.2016.09.003
Reference
  Authors
Thanh TT, van Doorn HR, de Jong MD
  Title
Human H5N1 influenza: current insight into pathogenesis.
  Journal
Int J Biochem Cell Biol 40:2671-4 (2008)
DOI:10.1016/j.biocel.2008.05.019
Reference
  Authors
Michael P, Brabant D, Bleiblo F, Ramana CV, Rutherford M, Khurana S, Tai TC, Kumar A, Kumar A
  Title
Influenza A induced cellular signal transduction pathways.
  Journal
J Thorac Dis 5 Suppl 2:S132-41 (2013)
DOI:10.3978/j.issn.2072-1439.2013.07.42
Reference
  Authors
Hale BG, Albrecht RA, Garcia-Sastre A
  Title
Innate immune evasion strategies of influenza viruses.
  Journal
Future Microbiol 5:23-41 (2010)
DOI:10.2217/fmb.09.108
Reference
  Authors
Sharma K, Tripathi S, Ranjan P, Kumar P, Garten R, Deyde V, Katz JM, Cox NJ, Lal RB, Sambhara S, Lal SK
  Title
Influenza A virus nucleoprotein exploits Hsp40 to inhibit PKR activation.
  Journal
PLoS One 6:e20215 (2011)
DOI:10.1371/journal.pone.0020215
Reference
  Authors
Ehrhardt C, Seyer R, Hrincius ER, Eierhoff T, Wolff T, Ludwig S
  Title
Interplay between influenza A virus and the innate immune signaling.
  Journal
Microbes Infect 12:81-7 (2010)
DOI:10.1016/j.micinf.2009.09.007
Reference
  Authors
van de Sandt CE, Kreijtz JH, Rimmelzwaan GF
  Title
Evasion of influenza A viruses from innate and adaptive immune responses.
  Journal
Viruses 4:1438-76 (2012)
DOI:10.3390/v4091438
Reference
  Authors
Long JS, Mistry B, Haslam SM, Barclay WS
  Title
Host and viral determinants of influenza A virus species specificity.
  Journal
Nat Rev Microbiol 17:67-81 (2019)
DOI:10.1038/s41579-018-0115-z
Reference
  Authors
Chen X, Liu S, Goraya MU, Maarouf M, Huang S, Chen JL
  Title
Host Immune Response to Influenza A Virus Infection.
  Journal
Front Immunol 9:320 (2018)
DOI:10.3389/fimmu.2018.00320
Reference
  Authors
Lu X, Masic A, Li Y, Shin Y, Liu Q, Zhou Y
  Title
The PI3K/Akt pathway inhibits influenza A virus-induced Bax-mediated apoptosis by negatively regulating the JNK pathway via ASK1.
  Journal
J Gen Virol 91:1439-49 (2010)
DOI:10.1099/vir.0.018465-0
Reference
  Authors
Ichinohe T, Iwasaki A, Hasegawa H
  Title
Innate sensors of influenza virus: clues to developing better intranasal vaccines.
  Journal
Expert Rev Vaccines 7:1435-45 (2008)
DOI:10.1586/14760584.7.9.1435
Reference
  Authors
Le Sage V, Cinti A, Amorim R, Mouland AJ
  Title
Adapting the Stress Response: Viral Subversion of the mTOR Signaling Pathway.
  Journal
Viruses 8:E152 (2016)
DOI:10.3390/v8060152
Reference
  Authors
Fan Y, Sanyal S, Bruzzone R
  Title
Breaking Bad: How Viruses Subvert the Cell Cycle.
  Journal
Front Cell Infect Microbiol 8:396 (2018)
DOI:10.3389/fcimb.2018.00396
Reference
  Authors
Varga ZT, Palese P
  Title
The influenza A virus protein PB1-F2: killing two birds with one stone?
  Journal
Virulence 2:542-6 (2011)
DOI:10.4161/viru.2.6.17812
Reference
  Authors
Atkin-Smith GK, Duan M, Chen W, Poon IKH
  Title
The induction and consequences of Influenza A virus-induced cell death.
  Journal
Cell Death Dis 9:1002 (2018)
DOI:10.1038/s41419-018-1035-6
Reference
  Authors
Nogales A, Martinez-Sobrido L, Topham DJ, DeDiego ML
  Title
Modulation of Innate Immune Responses by the Influenza A NS1 and PA-X Proteins.
  Journal
Viruses 10:E708 (2018)
DOI:10.3390/v10120708
Reference
  Authors
Dai X, Zhang L, Hong T
  Title
Host cellular signaling induced by influenza virus.
  Journal
Sci China Life Sci 54:68-74 (2011)
DOI:10.1007/s11427-010-4116-z
Reference
  Authors
Li J, Yu M, Zheng W, Liu W
  Title
Nucleocytoplasmic shuttling of influenza A virus proteins.
  Journal
Viruses 7:2668-82 (2015)
DOI:10.3390/v7052668
Reference
  Authors
Dou D, Revol R, Ostbye H, Wang H, Daniels R
  Title
Influenza A Virus Cell Entry, Replication, Virion Assembly and Movement.
  Journal
Front Immunol 9:1581 (2018)
DOI:10.3389/fimmu.2018.01581
Reference
  Authors
Paterson D, Fodor E
  Title
Emerging roles for the influenza A virus nuclear export protein (NEP).
  Journal
PLoS Pathog 8:e1003019 (2012)
DOI:10.1371/journal.ppat.1003019
Related
pathway
shab00900  Terpenoid backbone biosynthesis
shab03013  Nucleocytoplasmic transport
shab03015  mRNA surveillance pathway
shab04010  MAPK signaling pathway
shab04110  Cell cycle
shab04144  Endocytosis
shab04210  Apoptosis
shab04620  Toll-like receptor signaling pathway
shab04621  NOD-like receptor signaling pathway
shab04622  RIG-I-like receptor signaling pathway
KO pathway
ko05164   
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