| Entry: | efe:EFER_1278 (1148 a.a.) |
|---|---|
| Name: | transcription-repair coupling factor |
| KO: | K03723 transcription-repair coupling factor (superfamily II helicase) |
Search Result : 212 hits (reference genome only)
Entry KO len SW-score identity overlap ------------------------------------------------------------------ ------------------------------------- ecs:ECs_1492 transcription-repair coupling factor K03723 1164 7490 0.990 1148 eco:b1114 transcription-repair coupling factor K03723 1148 7486 0.989 1148 ecj:JW1100 transcription-repair coupling factor K03723 1148 7486 0.989 1148 sfl:SF1118 transcription-repair coupling factor K03723 1148 7471 0.986 1148 ece:Z1754 transcription-repair coupling factor; mutatio K03723 1148 7466 0.988 1148 seo:STM14_1391 transcription-repair coupling factor K03723 1148 7238 0.949 1148 stm:STM1216 transcription-repair coupling factor K03723 1148 7238 0.949 1148 sty:STY1256 transcription-repair coupling factor (TrcF) K03723 1148 7213 0.947 1148 cro:ROD_11811 transcription-repair coupling factor K03723 1148 7161 0.939 1148 kpn:KPN_01112 transcription-repair ATP-dependent coupli K03723 1152 6996 0.913 1148 enc:ECL_02522 transcription-repair coupling factor K03723 1148 6984 0.911 1148 eam:EAMY_1493 Transcription-repair-coupling factor K03723 1148 6435 0.833 1148 eca:ECA1821 transcription-repair coupling factor K03723 1149 6363 0.830 1148 ddd:Dda3937_03640 transcription-repair coupling factor K03723 1149 6249 0.807 1148 smar:SM39_1474 transcription-repair coupling factor K03723 1157 6241 0.810 1143 yps:YPTB2443 transcription-repair coupling factor K03723 1148 6196 0.807 1148 yen:YE1709 transcription-repair coupling factor K03723 1148 6195 0.804 1148 ypk:y1784 transcription-repair coupling factor K03723 1148 6191 0.807 1148 ype:YPO1625 transcription-repair coupling factor K03723 1148 6191 0.807 1148 pmu:PM1041 Mfd K03723 1145 5064 0.654 1143 vpa:VP0975 transcription-repair coupling factor K03723 1153 5023 0.650 1140 hin:HI_1258 transcription-repair coupling factor (mfd) K03723 1146 5016 0.639 1140 vfi:VF_A0460 transcription-repair coupling factor K03723 1151 5000 0.650 1143 vvu:VV1_2078 transcription-repair coupling factor K03723 1153 4999 0.649 1140 vch:VC_1886 transcription-repair coupling factor K03723 1155 4959 0.646 1139 apl:APL_1339 transcription-repair coupling factor K03723 1149 4845 0.621 1150 hdu:HD_0975 transcription repair coupling factor K03723 1160 4720 0.602 1157 son:SO_2255 transcription-repair coupling factor Mfd K03723 1164 4314 0.574 1147 pst:PSPTO_2101 transcription-repair coupling factor K03723 1150 4273 0.563 1150 psb:Psyr_1896 transcription-repair coupling factor K03723 1150 4272 0.563 1149 pae:PA3002 transcription-repair coupling factor K03723 1148 4270 0.573 1140 avn:Avin_14570 transcription-repair coupling factor K03723 1149 4244 0.566 1142 ppu:PP_2148 transcription-repair coupling factor K03723 1149 4172 0.555 1138 lpn:lpg0954 transcription repair coupling factor K03723 1153 3868 0.514 1143 xcc:XCC2698 transcription-repair coupling factor K03723 1155 3816 0.521 1154 xac:XAC2858 transcription-repair coupling factor K03723 1154 3808 0.521 1153 xom:XOO1373 transcription-repair coupling factor K03723 1154 3787 0.518 1153 acb:A1S_1623 transcription-repair coupling protein K03723 1153 3754 0.510 1142 mca:MCA1864 transcription-repair coupling factor K03723 1147 3718 0.502 1127 aci:ACIAD1395 transcription-repair coupling protein K03723 1171 3693 0.505 1142 xfa:XF_0045 transcription-repair coupling factor K03723 1193 3691 0.497 1193 bpe:BP0864 transcription-repair coupling factor K03723 1143 3663 0.513 1142 bma:BMA1491 transcription-repair coupling factor K03723 1157 3652 0.506 1150 bps:BPSL2100 transcription-repair coupling factor K03723 1189 3650 0.506 1150 rso:RSc1642 probable transcription-repair coupling fact K03723 1157 3585 0.507 1146 reh:H16_A1455 Transcription-repair coupling factor K03723 1149 3582 0.496 1144 bxe:Bxe_A2313 transcription-repair coupling factor K03723 1160 3581 0.496 1150 eba:ebA6555 Transcription-repair coupling protein Mfd K03723 1157 3555 0.487 1158 ngo:NGO_0623 transcription-repair coupling factor K03723 1234 3427 0.474 1204 nme:NMB1281 transcription-repair coupling factor K03723 1379 3129 0.428 1352 ftu:FTT_0644c Transcription-repair coupling factor,ATP- K03723 1141 3121 0.433 1132 buc:BU294 transcription-repair coupling factor K03723 812 2799 0.526 797 gsu:GSU0017 transcription-repair coupling factor K03723 1157 2776 0.433 1138 rpa:TX73_013805 transcription-repair coupling factor K03723 1172 2663 0.395 1151 bja:bll4601 transcription-repair coupling factor K03723 1172 2642 0.387 1151 rru:Rru_A1726 Transcription-repair coupling factor K03723 1177 2638 0.396 1158 rsp:RSP_2850 transcription-repair coupling factor K03723 1165 2564 0.391 1167 sme:SMc04450 Probable transcription-repair coupling fac K03723 1171 2558 0.388 1167 ccr:CC_1844 transcription-repair coupling factor K03723 1155 2553 0.399 1114 cau:Caur_3096 transcription-repair coupling factor K03723 1185 2527 0.414 1118 rle:RL2386 putative transcription-repair coupling facto K03723 1166 2522 0.379 1163 ret:RHE_CH02095 transcription-repair coupling factor (T K03723 1167 2499 0.379 1164 atu:Atu1778 transcription-repair coupling factor K03723 1165 2496 0.381 1160 mta:Moth_0081 transcription-repair coupling factor K03723 1183 2483 0.395 1124 mlo:mll0827 transcription repair coupling factor K03723 1165 2469 0.373 1167 pde:Pden_3811 transcription-repair coupling factor K03723 1154 2446 0.384 1154 bme:BMEII0688 transcription-repair coupling factor K03723 1170 2437 0.370 1158 lin:mfd transcription-repair coupling factor K03723 1179 2423 0.365 1165 lmo:lmo0214 transcription-repair coupling factor K03723 1179 2421 0.365 1171 bms:BRA0579 transcription-repair coupling factor K03723 1122 2399 0.371 1116 bmf:BAB2_0661 DEAD/DEAH box helicase:Helicase, C-termin K03723 1122 2391 0.370 1116 cac:CA_C3216 Transcription-repair coupling factor, MFD K03723 1171 2387 0.358 1154 bsu:BSU00550 transcription-repair-coupling factor K03723 1177 2379 0.373 1079 ser:SERP0141 transcription-repair coupling factor K03723 1169 2373 0.357 1159 sao:SAOUHSC_00477 transcription-repair coupling factor K03723 1168 2369 0.373 1095 sau:SA0461 transcription-repair coupling factor K03723 1168 2369 0.372 1095 cpe:CPE2484 transcription-repair coupling factor K03723 1162 2367 0.360 1143 cbo:CBO3539 transcription-repair coupling factor K03723 1168 2339 0.350 1138 lcb:LCABL_27140 Transcription-repair coupling factor (T K03723 1174 2333 0.366 1089 ksk:KSE_46630 putative transcription-repair-coupling fa K03723 1202 2319 0.395 1100 sgr:SGR_4422 putative transcriptional-repair coupling f K03723 1177 2316 0.381 1101 lla:L0263 transcription-repair coupling factor K03723 1161 2313 0.379 1089 gvi:gll3837 ORF_ID:gll3837 K03723 1154 2312 0.366 1134 sgu:SGLAU_14165 Transcription-repair-coupling factor K03723 1177 2311 0.371 1176 sco:SCO3109 putative transcriptional-repair coupling fa K03723 1184 2311 0.372 1180 efa:EF0257 transcription-repair coupling factor K03723 1189 2309 0.357 1119 spy:SPy_0008 putative transcription-repair coupling fac K03723 1167 2309 0.383 1074 sma:SAVERM_3549 putative transcriptional-repair couplin K03723 1176 2301 0.379 1145 btk:BT9727_0048 transcription-repair coupling factor K03723 1178 2296 0.356 1109 ban:BA_0052 transcription-repair coupling factor K03723 1176 2295 0.356 1109 bce:BC0058 Transcription-repair coupling factor K03723 1176 2288 0.355 1107 llm:llmg_0013 Transcription-repair coupling factor (TRC K03723 1180 2283 0.376 1105 ljo:LJ_0277 transcription-repair coupling factor K03723 1165 2276 0.353 1160 sct:SCAT_2123 Transcription-repair-coupling factor K03723 1200 2239 0.379 1110 blo:BL1025 transcription-repair coupling factor K03723 1194 2238 0.365 1163 amd:AMED_8219 transcription-repair coupling factor K03723 1184 2233 0.378 1135 smu:SMU_08 putative transcription-repair coupling facto K03723 1162 2232 0.357 1162 syf:Synpcc7942_1326 transcription-repair coupling facto K03723 1153 2229 0.375 1110 syn:sll0377 transcription-repair coupling factor K03723 1199 2228 0.367 1125 lil:LA_2513 transcription-repair coupling factor K03723 1186 2224 0.364 1068 syc:syc0227_c transcription-repair coupling factor K03723 1153 2217 0.374 1110 lpl:lp_0539 transcription-repair coupling factor K03723 1175 2213 0.337 1161 dvu:DVU_1903 transcription-repair coupling factor K03723 1160 2210 0.369 1074 cdi:DIP0911 transcription-repair coupling factor K03723 1264 2197 0.362 1192 mab:MAB_1157 Probable transcription-repair coupling fac K03723 1216 2193 0.379 1105 rha:RHA1_ro05760 transcription repair coupling factor K03723 1215 2186 0.383 1107 msm:MSMEG_5423 transcription-repair coupling factor K03723 1215 2183 0.367 1134 spn:SP_0006 transcription-repair coupling factor K03723 1169 2183 0.365 1094 tel:tll0952 transcription-repair coupling factor K03723 1142 2180 0.383 1056 cdf:CD630_35010 Transcription-repair coupling factor (T K03723 1128 2179 0.347 1052 cgl:Cgl0963 Transcription-repair coupling factor - supe K03723 1209 2175 0.362 1200 mle:ML0252 putative transcription-repair coupling facto K03723 1224 2169 0.379 1112 mtu:Rv1020 transcription-repair coupling factor K03723 1234 2164 0.379 1113 mtc:MT1048 transcription-repair coupling factor K03723 1234 2164 0.379 1113 spr:spr0006 Transcription-repair coupling factor K03723 1169 2161 0.362 1099 npu:Npun_R5494 transcription-repair coupling factor K03723 1170 2146 0.345 1114 tde:TDE_1287 transcription-repair coupling factor K03723 1155 2141 0.356 1142 ana:all5215 transcriptional-repair coupling factor K03723 1185 2122 0.352 1079 fps:FP0192 Transcription-repair coupling factor K03723 1117 2067 0.343 1121 pma:Pro_1000 Transcription-repair coupling factor K03723 1170 2056 0.331 1102 rco:RC0913 transcription-repair coupling factor K03723 1122 2039 0.331 1122 rpr:RP598 TRANSCRIPTION-REPAIR COUPLING FACTOR (mfd) K03723 1120 2023 0.322 1139 bfr:BF3127 transcription-repair coupling factor K03723 1125 2018 0.343 1100 tpa:TP_0344 transcription-repair coupling factor (trcF) K03723 1140 2009 0.341 1145 ctb:CTL0117 transcription-repair coupling factor K03723 1079 1979 0.355 1072 bth:BT_0252 transcription-repair coupling factor K03723 1127 1971 0.318 1188 bbu:BB_0623 transcription-repair coupling factor K03723 1125 1968 0.311 1124 ctr:CT_748 transcription-repair coupling factor K03723 1079 1967 0.353 1077 cpn:CPn_0891 Transcription-Repair Coupling K03723 1085 1951 0.346 1083 cte:CT0653 transcription-repair coupling factor K03723 1113 1924 0.361 1095 tth:TT_C0533 transcription-repair coupling factor K03723 978 1826 0.430 807 tma:TM1450 transcription-repair coupling factor, putati K03723 893 1747 0.430 639 fnu:FN0019 Transcription-repair coupling factor K03723 981 1745 0.338 994 dra:DR_1532 transcription-repair coupling factor K03723 1054 1741 0.365 968 hpy:HP_1541 transcription-repair coupling factor (trcF) K03723 999 1585 0.326 1002 hpj:jhp_1458 TRANSCRIPTION-REPAIR COUPLING FACTOR K03723 1001 1584 0.326 1002 cje:Cj1085c transcription-repair coupling factor K03723 978 1546 0.316 967 vvi:100251594 ATP-dependent DNA helicase At3g02060, chl 823 1403 0.354 701 csv:101222832 ATP-dependent DNA helicase At3g02060, chl 827 1396 0.347 706 sly:101256820 ATP-dependent DNA helicase At3g02060, chl 826 1390 0.360 678 mdm:103425758 ATP-dependent DNA helicase At3g02060, chl 826 1389 0.351 723 gmx:100791900 ATP-dependent DNA helicase At3g02060, chl 826 1372 0.336 840 mtr:11437254 ATP-dependent DNA helicase At3g02060, chlo 824 1362 0.341 760 rcu:8273068 ATP-dependent DNA helicase At3g02060, chlor 825 1361 0.328 762 cit:102609921 ATP-dependent DNA helicase At3g02060, chl 835 1359 0.347 678 ath:AT3G02060 DEAD/DEAH box helicase 823 1350 0.363 615 pti:PHATRDRAFT_30585 hypothetical protein 942 1332 0.402 577 osa:4350646 ATP-dependent DNA helicase At3g02060, chlor 832 1324 0.364 616 zma:103648038 ATP-dependent DNA helicase At3g02060, chl 825 1320 0.375 611 aae:aq_2053 ATP-dependent DNA helicase RecG K03655 792 889 0.387 385 hth:HTH_1310 ATP-dependent DNA helicase K03655 784 863 0.348 420 wol:WD_0824 ATP-dependent DNA helicase RecG K03655 673 856 0.369 426 vg:71068174 Pseudomonas phage YMC12/01/R24; hypothetica K03655 691 740 0.360 414 xtr:108645394 uncharacterized protein LOC108645394 616 579 0.290 559 cre:CHLRE_01g021850v5 uncharacterized protein 2290 523 0.298 486 tps:THAPSDRAFT_38827 predicted protein 171 410 0.431 167 mth:MTH_656 ATP-dependent RNA helicase related protein K03725 837 262 0.259 371 mja:MJ_1401 putative ATP dependent RNA helicase K03725 808 252 0.233 365 pab:PAB2313 Probable ATP-dependent RNA helicase K03725 855 239 0.230 366 bmor:101744021 ATP-dependent RNA helicase DDX42 K12835 746 236 0.244 360 ola:101174523 probable ATP-dependent RNA helicase DDX52 K14779 657 234 0.236 444 ame:724538 probable ATP-dependent RNA helicase DDX52 K14779 584 231 0.265 343 tca:663107 ATP-dependent RNA helicase DDX42 K12835 702 229 0.244 356 nmr:Nmar_0088 DEAD/DEAH box helicase domain protein K03724 913 229 0.241 448 tko:TK0566 DEAD/DEAH box RNA helicase K03725 832 227 0.230 365 mpn:MPN_211 excinuclease ABC subunit B K03702 657 227 0.242 273 sso:SSO0394 ATP-dependent helicase K03724 913 224 0.252 449 hsa:11325 DEAD-box helicase 42 K12835 938 221 0.240 491 mcc:717964 ATP-dependent RNA helicase DDX42 K12835 937 221 0.240 491 dme:Dmel_CG5589 aramis K14779 594 221 0.231 424 pfu:PF0053 putative ATP dependent RNA helicase K03725 836 220 0.227 365 ocu:100349279 ATP-dependent RNA helicase DDX42 isoform K12835 947 219 0.247 397 fca:101096859 ATP-dependent RNA helicase DDX42 isoform K12835 934 219 0.247 397 ecb:100054076 ATP-dependent RNA helicase DDX42 isoform K12835 935 219 0.247 397 cfa:480479 ATP-dependent RNA helicase DDX42 isoform X1 K12835 934 219 0.247 397 bta:100140430 LOW QUALITY PROTEIN: ATP-dependent RNA he K12835 947 219 0.247 397 ssc:100512557 LOW QUALITY PROTEIN: ATP-dependent RNA he K12835 941 219 0.247 397 mmp:MMP0727 excinuclease ABC subunit B K03702 646 219 0.220 305 mmu:72047 DEAD box helicase 42 K12835 929 218 0.247 397 mba:Mbar_A3595 ATP-dependent DNA helicase K03725 825 217 0.246 374 xla:444634 ATP-dependent RNA helicase DDX42-like K12835 952 214 0.232 426 rno:303607 ATP-dependent RNA helicase DDX42 K12835 929 214 0.247 397 tac:Ta0838 Large helicase related protein K03724 894 214 0.244 389 gga:419959 ATP-dependent RNA helicase DDX42 K12835 944 213 0.236 424 hma:rrnAC1139 ATP-dependent helicase K03724 944 213 0.217 378 hal:VNG_2390G excision nuclease chain B K03702 689 212 0.256 227 dre:407696 probable ATP-dependent RNA helicase DDX52 K14779 608 211 0.236 369 mge:MG_073 excinuclease ABC, B subunit K03702 656 206 0.222 243 sce:YGL171W RNA-dependent ATPase ROK1 K14779 564 205 0.237 329 mdo:100018382 DExD-box helicase 52 K14779 608 204 0.226 421 ddi:DDB_G0275443 DEAD/DEAH box helicase K12811 1151 200 0.218 377 aag:5568216 probable ATP-dependent RNA helicase DDX55 h K14809 607 197 0.209 344 aga:1275440 ATP-dependent RNA helicase vasa isoform X1 K13982 597 197 0.234 394 kla:KLLA0_C17424g uncharacterized protein K14779 579 196 0.227 362 hvo:HVO_1333 ATP-dependent DNA helicase K03724 946 189 0.223 341 lma:LMJF_32_0570 putative RNA helicase K14779 580 189 0.242 359 cel:CELE_F58E10.3 RNA helicase K12823 561 189 0.232 388 aor:AO090001000749 unnamed protein product; ATP-depende K14811 498 186 0.263 300 pai:PAE2362 ATP-dependent helicase K03724 928 183 0.226 390 tbr:Tb10.70.3290 ATP-dependent DEAD-box RNA helicase, p K12614 406 181 0.223 385 cal:CAALFM_C407100CA ATP-dependent RNA helicase K12854 1987 181 0.245 421 spo:2541786 ATP-dependent RNA helicase Rok1 K14779 481 181 0.224 303 cne:CNC06460 RNA helicase, putative K12614 625 180 0.222 388 mgr:MGG_03388 ATP-dependent RNA helicase DHH1 K12614 535 176 0.207 381 sai:Saci_0814 hypothetical DEAD/DEAH box helicase K03724 911 175 0.233 378 pfa:PF3D7_0320800 ATP-dependent RNA helicase DDX6 K12614 433 174 0.220 378 fgr:FGSG_12421 hypothetical protein K17679 574 174 0.225 423 ani:ANIA_10125 hypothetical protein K13181 814 174 0.229 450 afm:AFUA_2G06310 ATP-dependent RNA helicase K14811 503 174 0.266 297 ncr:NCU06149 ATP-dependent RNA helicase dhh-1 K12614 569 173 0.207 386 afu:AF_1149 large helicase-related protein (lhr-1) K03724 892 169 0.234 342 ape:APE_2188.1 putative ATP-dependent helicase K03724 948 147 0.232 319