Entry
Name
NOD-like receptor signaling pathway - Callithrix jacchus (white-tufted-ear marmoset)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
cjc04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Callithrix jacchus (white-tufted-ear marmoset) [GN:
cjc ]
Gene
100389449 NOD1; nucleotide-binding oligomerization domain-containing protein 1 isoform X1 [KO:K08727 ]
100415321 NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580 ]
100414962 NOD2; nucleotide-binding oligomerization domain-containing protein 2 isoform X1 [KO:K10165 ]
100398947 TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403 ]
100414129 TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
100401610 TAB3; TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1 [KO:K12793 ]
100404267 GABARAP; gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
100393860 GABARAPL2; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
100399942 GABARAPL1; gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
100410093 gamma-aminobutyric acid receptor-associated protein-like [KO:K08341 ]
100411187 gamma-aminobutyric acid receptor-associated protein-like [KO:K08341 ]
100400974 MAP1LC3C; LOW QUALITY PROTEIN: microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
100399550 MAP1LC3A; microtubule-associated proteins 1A/1B light chain 3A isoform X1 [KO:K10435 ]
100410303 MAP1LC3B; microtubule-associated proteins 1A/1B light chain 3B [KO:K10435 ]
100409569 CARD6; caspase recruitment domain-containing protein 6 isoform X1 [KO:K12797 ]
100394418 BIRC2; baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060 ]
100399118 BIRC3; baculoviral IAP repeat-containing protein 3 isoform X1 [KO:K16060 ]
100399254 CARD9; caspase recruitment domain-containing protein 9 [KO:K12794 ]
100410549 MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648 ]
100395103 TANK; TRAF family member-associated NF-kappa-B activator isoform X4 [KO:K12650 ]
100412129 NLRP1; NACHT, LRR and PYD domains-containing protein 1 [KO:K12798 ]
100395878 PYCARD; apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
100392399 NLRP3; NACHT, LRR and PYD domains-containing protein 3 isoform X1 [KO:K12800 ]
100393989 TRPM2; transient receptor potential cation channel subfamily M member 2 isoform X1 [KO:K04977 ] [EC:3.6.1.13 ]
100401153 TRPM7; transient receptor potential cation channel subfamily M member 7 isoform X1 [KO:K04982 ] [EC:2.7.11.1 ]
100413307 TRPV2; transient receptor potential cation channel subfamily V member 2 isoform X1 [KO:K04971 ]
100412340 GPRC6A; G-protein coupled receptor family C group 6 member A [KO:K04622 ]
100400803 PLCB3; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
100386921 PLCB2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
100409716 PLCB1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
100410075 PLCB4; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X3 [KO:K05858 ] [EC:3.1.4.11 ]
118144170 ITPR2; inositol 1,4,5-trisphosphate receptor type 2 isoform X1 [KO:K04959 ]
100390843 inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
100399873 VDAC1; voltage-dependent anion-selective channel protein 1 isoform X1 [KO:K05862 ]
100399481 VDAC2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
100398162 VDAC3; voltage-dependent anion-selective channel protein 3 [KO:K15041 ]
100395618 MCU; calcium uniporter protein, mitochondrial isoform X1 [KO:K20858 ]
100395464 BRCC3; lys-63-specific deubiquitinase BRCC36 [KO:K11864 ] [EC:3.4.19.-]
100409403 LOW QUALITY PROTEIN: heat shock protein HSP 90-beta-like [KO:K04079 ]
100403265 LOW QUALITY PROTEIN: heat shock protein HSP 90-beta-like [KO:K04079 ]
100415462 CARD8; caspase recruitment domain-containing protein 8 isoform X1 [KO:K12801 ]
100406340 PSTPIP1; proline-serine-threonine phosphatase-interacting protein 1 isoform X3 [KO:K12804 ]
118145584 CARD18; caspase recruitment domain-containing protein 18 [KO:K12806 ]
100414562 NLRP6; NACHT, LRR and PYD domains-containing protein 6 isoform X1 [KO:K20863 ]
100386387 NLRP7; NACHT, LRR and PYD domains-containing protein 7 isoform X1 [KO:K20864 ]
100415673 NAIP; LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 1 [KO:K12807 ]
108589048 PYDC5; LOW QUALITY PROTEIN: pyrin domain-containing protein 5 [KO:K20916 ]
108592425 LOW QUALITY PROTEIN: guanylate-binding protein 7-like [KO:K20899 ]
100401630 STAT1; signal transducer and activator of transcription 1-alpha/beta [KO:K11220 ]
100393190 STAT2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221 ]
100413151 MYD88; myeloid differentiation primary response protein MyD88 isoform X1 [KO:K04729 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
cjc04620 Toll-like receptor signaling pathway
KO pathway
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