KEGG   PATHWAY: clum04514
Entry
clum04514                   Pathway                                
Name
Cell adhesion molecules - Cyclopterus lumpus (lumpfish)
Description
Cell adhesion molecules (CAMs) are (glyco)proteins expressed on the cell surface and play a critical role in a wide array of biologic processes that include hemostasis, the immune response, inflammation, embryogenesis, and development of neuronal tissue. There are four main groups: the integrin family, the immunoglobulin superfamily, selectins, and cadherins. Membrane proteins that mediate immune cell–cell interactions fall into different categories, namely those involved in antigen recognition, costimulation and cellular adhesion. Furthermore cell-cell adhesions are important for brain morphology and highly coordinated brain functions such as memory and learning. During early development of the nervous system, neurons elongate their axons towards their targets and establish and maintain synapses through formation of cell-cell adhesions. Cell-cell adhesions also underpin axon-axon contacts and link neurons with supporting schwann cells and oligodendrocytes.
Class
Environmental Information Processing; Signaling molecules and interaction
Pathway map
clum04514  Cell adhesion molecules
clum04514

Other DBs
GO: 0050839
Organism
Cyclopterus lumpus (lumpfish) [GN:clum]
Gene
117725160  [KO:K25834]
117725227  [KO:K07523]
117725246  nrxn3a; neurexin 3a isoform X1 [KO:K07377]
117725305  si:dkey-221l4.11; claudin-23 [KO:K06087]
117725490  cd276; CD276 antigen isoform X1 [KO:K06746]
117726027  nrcama; neuronal cell adhesion molecule a isoform X1 [KO:K06756]
117726195  cntn1b; contactin 1b [KO:K06759]
117726543  lrrc4.1; leucine-rich repeat-containing protein 4 [KO:K16351]
117727147  [KO:K06087]
117727886  cdh15; cadherin-15 [KO:K06809]
117727998  mag; myelin-associated glycoprotein isoform X1 [KO:K06771]
117728286  si:dkey-24p1.1; B-cell receptor CD22 [KO:K06467]
117728714  neo1a; neogenin 1a isoform X1 [KO:K06766]
117728870  [KO:K06816]
117729165  ptprc; receptor-type tyrosine-protein phosphatase C isoform X1 [KO:K06478] [EC:3.1.3.48]
117729389  ptprsa; receptor-type tyrosine-protein phosphatase S [KO:K06778] [EC:3.1.3.48]
117729457  ptprfa; protein tyrosine phosphatase receptor type Fa isoform X1 [KO:K05695] [EC:3.1.3.48]
117729464  [KO:K06467]
117729521  nlgn1; neuroligin-1 isoform X1 [KO:K07378]
117729557  [KO:K06736]
117729650  [KO:K06496]
117729651  vcam1b; vascular cell adhesion protein 1b [KO:K06527]
117729712  [KO:K06087]
117729715  negr1; neuronal growth regulator 1 [KO:K06775]
117729798  si:ch73-61d6.3; occludin [KO:K06088]
117729814  [KO:K06087]
117729855  [KO:K06087]
117730016  cldn34a; claudin-34 [KO:K06087]
117730154  [KO:K06710]
117730178  selp; P-selectin isoform X1 [KO:K06496]
117730179  [KO:K06496]
117730182  [KO:K06495]
117730273  sdc4; syndecan-4 isoform X1 [KO:K16338]
117730399  cntn2; contactin-2 [KO:K06760]
117730405  zmp:0000001082; integrin alpha-M isoform X1 [KO:K05718]
117730574  [KO:K06752]
117730725  cd8a; T-cell surface glycoprotein CD8 alpha chain isoform X1 [KO:K06458]
117730908  [KO:K06797]
117731012  cldn19; claudin-19 [KO:K06087]
117731076  si:ch211-286o17.1; hematopoietic progenitor cell antigen CD34 [KO:K06474]
117731241  nfasca; neurofascin homolog (chicken) a [KO:K06757]
117731450  [KO:K06752]
117732088  [KO:K06756]
117732259  [KO:K06759]
117732378  [KO:K05689]
117732392  [KO:K06449]
117732554  [KO:K06467]
117732570  lrrc4.2; leucine-rich repeat-containing protein 4.2 [KO:K16351]
117732576  lrrc4ca; leucine rich repeat containing 4C, genome duplicate a [KO:K07523]
117732614  glg1a; Golgi apparatus protein 1 [KO:K06816]
117733136  cd40; tumor necrosis factor receptor superfamily member 5 isoform X1 [KO:K03160]
117733246  nfascb; neurofascin [KO:K06757]
117733386  ptprdb; LOW QUALITY PROTEIN: protein tyrosine phosphatase receptor type Db [KO:K06777] [EC:3.1.3.48]
117733546  l1cama; neural cell adhesion molecule L1.2 isoform X1 [KO:K06550]
117733567  [KO:K06087]
117733600  [KO:K06550]
117733656  si:dkey-237i9.8; platelet endothelial cell adhesion molecule isoform X1 [KO:K06471]
117734022  [KO:K06797]
117734073  si:dkey-261h17.1; uncharacterized protein si:dkey-261h17.1 isoform X1 [KO:K06474]
117734465  pecam1; platelet endothelial cell adhesion molecule [KO:K06471]
117734517  cldnk; claudin k [KO:K06087]
117734640  cldni; claudin i [KO:K06087]
117735015  cntnap1; contactin-associated protein 1 [KO:K07379]
117735152  lrrc4ba; leucine-rich repeat-containing protein 4B [KO:K16360]
117735807  [KO:K16359]
117735881  vsig8b; V-set and immunoglobulin domain-containing protein 8b [KO:K06788]
117736768  si:dkey-98f17.3; putative claudin-24 [KO:K06087]
117736939  oclnb; occludin b [KO:K06088]
117736947  cldn5a; claudin 5a [KO:K06087]
117737223  [KO:K06485]
117737383  nlgn3a; neuroligin-3a isoform X1 [KO:K07378]
117737486  slitrk2; SLIT and NTRK-like protein 2 [KO:K25833]
117737643  slitrk4; SLIT and NTRK-like protein 4 [KO:K25835]
117738560  sdc2; syndecan-2 [KO:K16336]
117738693  sdc3; syndecan-3 [KO:K16337]
117738769  [KO:K06751]
117738770  [KO:K06751]
117738771  [KO:K06751]
117738772  [KO:K06751]
117738775  [KO:K06751]
117738776  [KO:K06751]
117738777  [KO:K06751]
117739333  [KO:K06751]
117739375  [KO:K06751]
117739437  [KO:K06456]
117739460  [KO:K06087]
117739550  itgb8; integrin beta-8 isoform X1 [KO:K06591]
117740131  [KO:K06745]
117740352  cldn10a; claudin-10a [KO:K06087]
117740363  cldn5b; claudin-5b [KO:K06087]
117740509  cldn23a; claudin-23 [KO:K06087]
117740521  [KO:K06520]
117740564  slitrk6; SLIT and NTRK-like protein 6 [KO:K25837]
117740653  [KO:K16359]
117740742  [KO:K06788]
117740940  oclna; occludin [KO:K06088]
117741153  esamb; endothelial cell-selective adhesion molecule [KO:K06787]
117741265  nectin1b; nectin cell adhesion molecule 1b [KO:K06081]
117741290  [KO:K06087]
117741301  [KO:K06087]
117741325  cldnf; claudin f [KO:K06087]
117741345  [KO:K06087]
117741393  [KO:K06087]
117741394  [KO:K06087]
117741506  cadm1b; cell adhesion molecule 1b [KO:K06781]
117741511  zgc:110333; claudin-8 [KO:K06087]
117741556  cldnj; claudin j [KO:K06087]
117741565  [KO:K06087]
117741576  slitrk3a; SLIT and NTRK-like protein 3 [KO:K25834]
117741584  jam3a; junctional adhesion molecule 3B [KO:K06785]
117741669  [KO:K05413]
117741697  [KO:K06087]
117741724  nectin3a; nectin-3-like protein isoform X1 [KO:K06592]
117741764  ncam1b; neural cell adhesion molecule 1b [KO:K06491]
117741926  [KO:K06087]
117741939  [KO:K06087]
117741977  igsf11; immunoglobulin superfamily member 11 isoform X1 [KO:K06791]
117741991  [KO:K06547]
117741999  cldn8; claudin-8 [KO:K06087]
117742259  nectin3b; nectin-3-like protein isoform X1 [KO:K06592]
117742362  cd99; CD99 molecule isoform X1 [KO:K06520]
117742427  [KO:K06087]
117742522  [KO:K06087]
117742523  [KO:K06087]
117742525  [KO:K06087]
117742534  [KO:K06087]
117742558  [KO:K06087]
117742563  nlgn2b; neuroligin-2b isoform X1 [KO:K07378]
117742566  cadm1a; cell adhesion molecule 1a isoform X1 [KO:K06781]
117742613  nlgn3b; neuroligin-3b isoform X1 [KO:K07378]
117742657  [KO:K06449]
117742959  alcama; CD166 antigen homolog A isoform X1 [KO:K06547]
117742980  [KO:K06087]
117742987  nectin1a; nectin cell adhesion molecule 1a [KO:K06081]
117743008  [KO:K06087]
117743009  [KO:K06087]
117743044  esama; endothelial cell adhesion molecule a [KO:K06787]
117743103  ncam1a; neural cell adhesion molecule 1a [KO:K06491]
117743120  cxadr; coxsackievirus and adenovirus receptor homolog [KO:K06788]
117743128  zgc:165604; immunoglobulin superfamily member 11 [KO:K06791]
117743140  jam3b; junctional adhesion molecule 3B [KO:K06785]
117743143  [KO:K06087]
117743195  [KO:K06087]
117743223  [KO:K06087]
117743273  cldn2; claudin-2 [KO:K06087]
117743294  f11r.1; F11 receptor, tandem duplicate 1 [KO:K06089]
117743706  vsir; V-type immunoglobulin domain-containing suppressor of T-cell activation [KO:K23268]
117743757  cdh5; cadherin-5 [KO:K06533]
117743931  [KO:K07377]
117743986  [KO:K05689]
117744240  itga9; integrin alpha-9 [KO:K06585]
117744243  nlgn4xa; neuroligin 4 X-linked a isoform X1 [KO:K07378]
117744428  [KO:K06491]
117744932  si:ch211-181l5.2; claudin-10 [KO:K06087]
117744948  [KO:K06087]
117745017  itga8; integrin alpha-8 isoform X1 [KO:K06584]
117745039  jam2a; junctional adhesion molecule 2a isoform X1 [KO:K06735]
117745168  [KO:K06771]
117745171  [KO:K16336]
117745215  cldn12; claudin-12 [KO:K06087]
117745366  ncam3; neural cell adhesion molecule 1 isoform X1 [KO:K06491]
117745367  [KO:K25836]
117745454  si:ch73-22o12.1; nectin-2 isoform X1 [KO:K06531]
117745461  cd4-1; CD4-1 molecule isoform X1 [KO:K06454]
117745476  [KO:K03160]
117745543  [KO:K25832]
117745568  [KO:K06752]
117745569  [KO:K06752]
117745766  si:dkey-33i11.1; sialoadhesin [KO:K06467]
117745828  [KO:K06467]
117745969  [KO:K05695] [EC:3.1.3.48]
117745983  cldn18; claudin-18 [KO:K06087]
117746128  [KO:K05719]
117746162  cntnap2b; contactin-associated protein-like 2b isoform X1 [KO:K07380]
117746245  cdh2; cadherin-2 [KO:K06736]
117746248  [KO:K05693] [EC:3.1.3.48]
117746415  cadm3; cell adhesion molecule 3 [KO:K06780]
117746575  [KO:K06087]
117746583  [KO:K06087]
117746638  cldn1; claudin-1 [KO:K06087]
117746777  [KO:K07522]
117746803  zgc:154006; occludin [KO:K06088]
117746807  cldn15la; claudin 15-like a [KO:K06087]
117746882  [KO:K06778] [EC:3.1.3.48]
117746925  [KO:K06485]
117747618  [KO:K06752]
117747619  [KO:K06752]
117747716  nlgn2a; LOW QUALITY PROTEIN: neuroligin-2a [KO:K07378]
117747748  nrxn2b; neurexin 2b [KO:K07377]
117747817  cldn7a; claudin-7-A [KO:K06087]
117747858  cldn15a; claudin-15a [KO:K06087]
117747892  [KO:K06777] [EC:3.1.3.48]
117747935  cd99l2; CD99 antigen-like protein 2 isoform X1 [KO:K06520]
117748400  [KO:K06461]
117748544  nrxn1a; neurexin 1a isoform X1 [KO:K07377]
117748764  [KO:K16360]
117749412  [KO:K05693] [EC:3.1.3.48]
117749685  ntng1a; netrin-G1 [KO:K07522]
117749744  cldn11b; claudin-11b [KO:K06087]
117749806  itgb1a; integrin beta-1a [KO:K05719]
117749915  cntnap2a; contactin-associated protein-like 2a [KO:K07380]
117749939  cd226; CD226 antigen [KO:K06567]
117750071  [KO:K06081]
117750107  itga4; integrin alpha-4 isoform X1 [KO:K06483]
117750141  [KO:K06487]
117750169  [KO:K06087]
117750253  itgb2; integrin beta-2 isoform X1 [KO:K06464]
117750341  [KO:K07378]
117750486  [KO:K06087]
117750513  [KO:K06538]
117750552  jam2b; junctional adhesion molecule 2b [KO:K06735]
117750636  [KO:K06087]
117750659  [KO:K06087]
117750746  [KO:K06538]
117750771  [KO:K06538]
117750978  vtcn1; V-set domain-containing T-cell activation inhibitor 1 [KO:K06747]
117751016  slitrk5b; SLIT and NTRK-like protein 5 [KO:K25836]
117751025  itga6a; integrin alpha-6 isoform X1 [KO:K06485]
117751143  cldn11a; claudin-11a [KO:K06087]
Reference
  Authors
Barclay AN.
  Title
Membrane proteins with immunoglobulin-like domains--a master superfamily of interaction molecules.
  Journal
Semin Immunol 15:215-23 (2003)
DOI:10.1016/S1044-5323(03)00047-2
Reference
  Authors
Sharpe AH, Freeman GJ.
  Title
The B7-CD28 superfamily.
  Journal
Nat Rev Immunol 2:116-26 (2002)
DOI:10.1038/nri727
Reference
PMID:9597126
  Authors
Grewal IS, Flavell RA.
  Title
CD40 and CD154 in cell-mediated immunity.
  Journal
Annu Rev Immunol 16:111-35 (1998)
DOI:10.1146/annurev.immunol.16.1.111
Reference
  Authors
Dardalhon V, Schubart AS, Reddy J, Meyers JH, Monney L, Sabatos CA, Ahuja R, Nguyen K, Freeman GJ, Greenfield EA, Sobel RA, Kuchroo VK.
  Title
CD226 is specifically expressed on the surface of Th1 cells and regulates their expansion and effector functions.
  Journal
J Immunol 175:1558-65 (2005)
DOI:10.4049/jimmunol.175.3.1558
Reference
  Authors
Montoya MC, Sancho D, Vicente-Manzanares M, Sanchez-Madrid F.
  Title
Cell adhesion and polarity during immune interactions.
  Journal
Immunol Rev 186:68-82 (2002)
DOI:10.1034/j.1600-065X.2002.18607.x
Reference
  Authors
Dejana E.
  Title
Endothelial cell-cell junctions: happy together.
  Journal
Nat Rev Mol Cell Biol 5:261-70 (2004)
DOI:10.1038/nrm1357
Reference
  Authors
Bazzoni G.
  Title
The JAM family of junctional adhesion molecules.
  Journal
Curr Opin Cell Biol 15:525-30 (2003)
DOI:10.1016/S0955-0674(03)00104-2
Reference
  Authors
Becker BF, Heindl B, Kupatt C, Zahler S.
  Title
Endothelial function and hemostasis.
  Journal
Z Kardiol 89:160-7 (2000)
DOI:10.1007/PL00007320
Reference
PMID:9150551
  Authors
Elangbam CS, Qualls CW Jr, Dahlgren RR.
  Title
Cell adhesion molecules--update.
  Journal
Vet Pathol 34:61-73 (1997)
DOI:10.1177/030098589703400113
Reference
  Authors
Muller WA.
  Title
Leukocyte-endothelial-cell interactions in leukocyte transmigration and the inflammatory response.
  Journal
Trends Immunol 24:327-34 (2003)
DOI:10.1016/S1471-4906(03)00117-0
Reference
  Authors
Yamagata M, Sanes JR, Weiner JA.
  Title
Synaptic adhesion molecules.
  Journal
Curr Opin Cell Biol 15:621-32 (2003)
DOI:10.1016/S0955-0674(03)00107-8
Reference
  Authors
Ethell IM, Pasquale EB.
  Title
Molecular mechanisms of dendritic spine development and remodeling.
  Journal
Prog Neurobiol 75:161-205 (2005)
DOI:10.1016/j.pneurobio.2005.02.003
Reference
  Authors
Benson DL, Schnapp LM, Shapiro L, Huntley GW.
  Title
Making memories stick: cell-adhesion molecules in synaptic plasticity.
  Journal
Trends Cell Biol 10:473-82 (2000)
DOI:10.1016/S0962-8924(00)01838-9
Reference
  Authors
Rosdahl JA, Mourton TL, Brady-Kalnay SM.
  Title
Protein kinase C delta (PKCdelta) is required for protein tyrosine phosphatase mu (PTPmu)-dependent neurite outgrowth.
  Journal
Mol Cell Neurosci 19:292-306 (2002)
DOI:10.1006/mcne.2001.1071
Reference
  Authors
Dunican DJ, Doherty P.
  Title
The generation of localized calcium rises mediated by cell adhesion molecules and their role in neuronal growth cone motility.
  Journal
Mol Cell Biol Res Commun 3:255-63 (2000)
DOI:10.1006/mcbr.2000.0225
Reference
  Authors
Girault JA, Peles E.
  Title
Development of nodes of Ranvier.
  Journal
Curr Opin Neurobiol 12:476-85 (2002)
DOI:10.1016/S0959-4388(02)00370-7
Reference
  Authors
Arroyo EJ, Scherer SS.
  Title
On the molecular architecture of myelinated fibers.
  Journal
Histochem Cell Biol 113:1-18 (2000)
DOI:10.1007/s004180050001
Reference
  Authors
Salzer JL.
  Title
Polarized domains of myelinated axons.
  Journal
Neuron 40:297-318 (2003)
DOI:10.1016/S0896-6273(03)00628-7
Reference
  Authors
Irie K, Shimizu K, Sakisaka T, Ikeda W, Takai Y.
  Title
Roles and modes of action of nectins in cell-cell adhesion.
  Journal
Semin Cell Dev Biol 15:643-56 (2004)
DOI:10.1016/j.semcdb.2004.09.002
Reference
  Authors
Nakanishi H, Takai Y.
  Title
Roles of nectins in cell adhesion, migration and polarization.
  Journal
Biol Chem 385:885-92 (2004)
DOI:10.1515/BC.2004.116
Reference
  Authors
Siu MK, Cheng CY.
  Title
Extracellular matrix: recent advances on its role in junction dynamics in the seminiferous epithelium during spermatogenesis.
  Journal
Biol Reprod 71:375-91 (2004)
DOI:10.1095/biolreprod.104.028225
Reference
  Authors
Lee NP, Cheng CY.
  Title
Adaptors, junction dynamics, and spermatogenesis.
  Journal
Biol Reprod 71:392-404 (2004)
DOI:10.1095/biolreprod.104.027268
Reference
  Authors
Inagaki M, Irie K, Ishizaki H, Tanaka-Okamoto M, Morimoto K, Inoue E, Ohtsuka T, Miyoshi J, Takai Y.
  Title
Roles of cell-adhesion molecules nectin 1 and nectin 3 in ciliary body development.
  Journal
Development 132:1525-37 (2005)
DOI:10.1242/dev.01697
Reference
  Authors
Marthiens V, Gavard J, Lambert M, Mege RM.
  Title
Cadherin-based cell adhesion in neuromuscular development.
  Journal
Biol Cell 94:315-26 (2002)
DOI:10.1016/S0248-4900(02)00005-9
Reference
  Authors
Krauss RS, Cole F, Gaio U, Takaesu G, Zhang W, Kang JS.
  Title
Close encounters: regulation of vertebrate skeletal myogenesis by cell-cell contact.
  Journal
J Cell Sci 118:2355-62 (2005)
DOI:10.1242/jcs.02397
Related
pathway
clum04520  Adherens junction
clum04530  Tight junction
KO pathway
ko04514   

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