KEGG   PATHWAY: osa03440
Entry
osa03440                    Pathway                                
Name
Homologous recombination - Oryza sativa japonica (Japanese rice)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
osa03440  Homologous recombination
osa03440

Other DBs
GO: 0000724
Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
107276010  [KO:K10683]
107277028  [KO:K10875] [EC:5.6.2.-]
107277180  [KO:K10875] [EC:5.6.2.-]
112936215  [KO:K03505]
136351125  [KO:K15362] [EC:5.6.2.3]
4323853  [KO:K10870]
4324417  [KO:K08775]
4325041  [KO:K03553]
4325173  [KO:K10881]
4325837  ERCC4; crossover junction endonuclease MUS81 [KO:K08991] [EC:3.1.22.-]
4326151  [KO:K04728] [EC:2.7.11.1]
4326564  [KO:K03111]
4327080  [KO:K03504]
4327264  [KO:K10881]
4327706  OsJ_01130; replication protein A 14 kDa subunit isoform X2 [KO:K10740]
4329409  [KO:K10866] [EC:3.6.-.-]
4329686  [KO:K10880]
4330068  OsRPA32-2; replication protein A 32 kDa subunit B [KO:K10739]
4330491  [KO:K03655] [EC:5.6.2.4]
4330819  OsJ_08484; dNA repair and recombination protein RAD54 [KO:K10875] [EC:5.6.2.-]
4330902  OsJ_08582; replication protein A 70 kDa DNA-binding subunit A [KO:K07466]
4330923  [KO:K10901] [EC:5.6.2.4]
4331236  OsJ_08977; replication protein A 32 kDa subunit A [KO:K10739]
4331489  OJ1528D07.1; DNA polymerase delta small subunit [KO:K02328]
4332052  OsJ_09906; replication protein A 70 kDa DNA-binding subunit B [KO:K07466]
4332589  [KO:K10728]
4333537  [KO:K03553]
4335888  [KO:K10901] [EC:5.6.2.4]
4336384  [KO:K10683]
4337137  MRE11; double-strand break repair protein MRE11 [KO:K10865]
4337150  [KO:K02335] [EC:2.7.7.7]
4337213  EME1; crossover junction endonuclease EME1 [KO:K10882] [EC:3.1.22.-]
4337594  OsJ_16860; replication protein A 70 kDa DNA-binding subunit C [KO:K07466]
4337655  [KO:K10869]
4338690  [KO:K10875] [EC:5.6.2.-]
4339293  [KO:K10683]
4339481  [KO:K11864] [EC:3.4.19.-]
4340143  [KO:K20776]
4340671  [KO:K10875] [EC:5.6.2.-]
4342073  [KO:K12173]
4343066  [KO:K10875] [EC:5.6.2.-]
4344363  [KO:K10728]
4344376  [KO:K10875] [EC:5.6.2.-]
4344737  [KO:K03505]
4344789  OsJ_26226; DNA polymerase I A, chloroplastic [KO:K02335] [EC:2.7.7.7]
4344791  [KO:K02335] [EC:2.7.7.7]
4346376  [KO:K10871]
4347482  TOP3B; DNA topoisomerase 3-beta [KO:K03165] [EC:5.6.2.1]
4347604  P0669G04.6; uncharacterized LOC4347604 [KO:K03505]
4348951  NBS1; nibrin homolog [KO:K10867]
4349968  OspolD1; DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
4349978  [KO:K10728]
4350329  [KO:K03553]
4350923  [KO:K04482]
4352257  [KO:K04482]
9267584  [KO:K10875] [EC:5.6.2.-]
9269718  [KO:K03165] [EC:5.6.2.1]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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