KEGG   PATHWAY: lcm04510
Entry
lcm04510                    Pathway                                
Name
Focal adhesion - Latimeria chalumnae (coelacanth)
Description
Cell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the cell-extracellular matrix contact points, specialized structures are formed and termed focal adhesions, where bundles of actin filaments are anchored to transmembrane receptors of the integrin family through a multi-molecular complex of junctional plaque proteins. Some of the constituents of focal adhesions participate in the structural link between membrane receptors and the actin cytoskeleton, while others are signalling molecules, including different protein kinases and phosphatases, their substrates, and various adapter proteins. Integrin signaling is dependent upon the non-receptor tyrosine kinase activities of the FAK and src proteins as well as the adaptor protein functions of FAK, src and Shc to initiate downstream signaling events. These signalling events culminate in reorganization of the actin cytoskeleton; a prerequisite for changes in cell shape and motility, and gene expression. Similar morphological alterations and modulation of gene expression are initiated by the binding of growth factors to their respective receptors, emphasizing the considerable crosstalk between adhesion- and growth factor-mediated signalling.
Class
Cellular Processes; Cellular community - eukaryotes
Pathway map
lcm04510  Focal adhesion
lcm04510

Other DBs
GO: 0005925
Organism
Latimeria chalumnae (coelacanth) [GN:lcm]
Gene
102349893  COL1A1; collagen type I alpha 1 chain [KO:K06236]
102345189  COL1A2; collagen type I alpha 2 chain [KO:K06236]
102359526  COL2A1; collagen type II alpha 1 chain [KO:K19719]
102345734  collagen alpha-2(V) chain-like [KO:K19719]
102348817  COL4A3; collagen alpha-3(IV) chain [KO:K06237]
102349091  collagen alpha-4(IV) chain-like [KO:K06237]
102346118  COL4A5; collagen type IV alpha 5 chain [KO:K06237]
102346381  COL4A6; collagen type IV alpha 6 chain [KO:K06237]
102351071  COL4A2; collagen type IV alpha 2 chain [KO:K06237]
102351330  COL4A1; collagen type IV alpha 1 chain [KO:K06237]
102350204  COL6A6; collagen type VI alpha 6 chain [KO:K06238]
102348142  COL6A1; collagen type VI alpha 1 chain [KO:K06238]
102346628  COL6A2; collagen type VI alpha 2 chain [KO:K06238]
102362500  COL6A3; collagen type VI alpha 3 chain [KO:K06238]
102365826  collagen alpha-1(VI) chain-like [KO:K06238]
102347619  collagen alpha-6(VI) chain-like [KO:K06238]
102351679  collagen alpha-2(VI) chain-like [KO:K06238]
102355648  COL9A3; collagen type IX alpha 3 chain [KO:K08131]
102355403  uncharacterized LOC102355403 [KO:K08131]
102360658  COL9A2; collagen type IX alpha 2 chain [KO:K08131]
102365808  collagen alpha-1(IX) chain-like [KO:K08131]
102353402  LAMA2; laminin subunit alpha 2 [KO:K05637]
102367012  LAMA1; laminin subunit alpha 1 [KO:K05637]
102366759  LAMA3; laminin subunit alpha-3 [KO:K06240]
102355038  LAMA5; laminin subunit alpha 5 [KO:K06240]
102359744  LAMA4; laminin subunit alpha 4 [KO:K06241]
102357660  LAMB1; laminin subunit beta 1 [KO:K05636]
102357973  LAMB2; laminin subunit beta 2 [KO:K06243]
102357703  laminin subunit beta-1-like [KO:K06243]
102358013  LAMB3; laminin subunit beta 3 [KO:K06244]
102356245  LAMB4; laminin subunit beta 4 [KO:K06245]
102359639  LAMC1; laminin subunit gamma 1 [KO:K05635]
102359091  LAMC2; laminin subunit gamma 2 [KO:K06246]
102355446  LAMC3; laminin subunit gamma 3 [KO:K06247]
102361099  CHAD; chondroadherin [KO:K06248]
102348401  RELN; reelin [KO:K06249] [EC:3.4.21.-]
102358103  THBS1; thrombospondin 1 [KO:K16857]
102360244  COMP; cartilage oligomeric matrix protein [KO:K04659]
102345222  THBS4; thrombospondin 4 [KO:K04659]
102363612  THBS2; thrombospondin 2 [KO:K04659]
102349677  THBS3; thrombospondin 3 [KO:K04659]
102367537  FN1; fibronectin 1 [KO:K05717]
102353922  SPP1; osteopontin [KO:K06250]
102362370  VTN; vitronectin [KO:K06251]
102345859  TNXB; tenascin XB [KO:K06252]
102351342  TNN; tenascin N [KO:K06252]
102366554  TNC; tenascin C [KO:K06252]
102366423  TNR; tenascin R [KO:K06252]
102356867  VWF; von Willebrand factor [KO:K03900]
102365285  ITGA1; integrin subunit alpha 1 [KO:K06480]
102355132  ITGA2; integrin subunit alpha 2 [KO:K06481]
102347243  ITGA3; integrin subunit alpha 3 [KO:K06482]
102348836  ITGA4; integrin subunit alpha 4 [KO:K06483]
102364268  integrin alpha-5-like [KO:K06484]
102345625  ITGA6; integrin subunit alpha 6 [KO:K06485]
102365385  ITGA7; integrin subunit alpha 7 [KO:K06583]
102354617  integrin alpha-8 [KO:K06584]
102349376  ITGA9; integrin subunit alpha 9 [KO:K06585]
102352016  ITGA10; integrin subunit alpha 10 [KO:K06586]
102358961  ITGA11; integrin subunit alpha 11 [KO:K06587]
102367090  ITGAV; integrin subunit alpha V [KO:K06487]
102348482  ITGB1; integrin subunit beta 1 [KO:K05719]
102349935  ITGB3; integrin subunit beta 3 [KO:K06493]
102353222  ITGB4; integrin subunit beta 4 [KO:K06525]
102360569  ITGB5; integrin subunit beta 5 [KO:K06588]
102346959  ITGB6; integrin subunit beta 6 [KO:K06589]
102367083  ITGB7; integrin subunit beta 7 [KO:K06590]
102345380  ITGB8; integrin beta-8 [KO:K06591]
102363606  EMP2; epithelial membrane protein 2 [KO:K26256]
102352946  PDGFA; platelet derived growth factor subunit A [KO:K04359]
102355435  PDGFB; platelet derived growth factor subunit B [KO:K17386]
102356509  PDGFC; platelet derived growth factor C [KO:K05450]
102351685  PDGFD; platelet derived growth factor D [KO:K05450]
102348800  pro-epidermal growth factor-like [KO:K04357]
102356822  EGF; epidermal growth factor [KO:K04357]
102365620  insulin-like growth factor I [KO:K05459]
102361051  IGF1; insulin like growth factor 1 [KO:K05459]
102347582  VEGFB; vascular endothelial growth factor B [KO:K05448]
102367264  VEGFA; vascular endothelial growth factor A [KO:K05448]
102359260  PGF; placental growth factor [KO:K16859]
102361405  placenta growth factor-like [KO:K16859]
102360711  vascular endothelial growth factor C-like [KO:K05449]
102361433  VEGFD; vascular endothelial growth factor D [KO:K05449]
102367077  VEGFC; vascular endothelial growth factor C [KO:K05449]
102354206  HGF; hepatocyte growth factor [KO:K05460]
102353753  PDGFRA; platelet derived growth factor receptor alpha [KO:K04363] [EC:2.7.10.1]
102361386  PDGFRB; platelet derived growth factor receptor beta [KO:K05089] [EC:2.7.10.1]
102367342  IGF1R; insulin like growth factor 1 receptor [KO:K05087] [EC:2.7.10.1]
102362684  KDR; kinase insert domain receptor [KO:K05098] [EC:2.7.10.1]
102345121  FLT1; fms related tyrosine kinase 1 [KO:K05096] [EC:2.7.10.1]
102365485  vascular endothelial growth factor receptor kdr-like [KO:K05096] [EC:2.7.10.1]
102359993  FLT4; fms related tyrosine kinase 4 [KO:K05097] [EC:2.7.10.1]
102366006  MET; MET proto-oncogene, receptor tyrosine kinase [KO:K05099] [EC:2.7.10.1]
102348821  ERBB2; erb-b2 receptor tyrosine kinase 2 [KO:K05083] [EC:2.7.10.1]
102345691  EMP1; epithelial membrane protein 1 [KO:K26255]
102360542  SRC; SRC proto-oncogene, non-receptor tyrosine kinase [KO:K05704] [EC:2.7.10.2]
102359039  ARHGAP35; Rho GTPase activating protein 35 [KO:K05732]
102361826  ARHGAP5; Rho GTPase activating protein 5 [KO:K13709]
102351192  RHOC; ras homolog family member C [KO:K04513]
102363105  RHOA; ras homolog family member A [KO:K04513]
102348524  rho-related GTP-binding protein RhoC [KO:K04513]
102365487  DIAPH1; diaphanous related formin 1 [KO:K05740]
102350260  ROCK1; Rho associated coiled-coil containing protein kinase 1 [KO:K04514] [EC:2.7.11.1]
102354777  ROCK2; Rho associated coiled-coil containing protein kinase 2 [KO:K17388] [EC:2.7.11.1]
102362592  MYL2; myosin light chain 2 [KO:K10351]
102348633  MYL5; myosin light chain 5 [KO:K12753]
102364976  MYL7; myosin light chain 7 [KO:K12754]
102365825  MYL9; myosin light chain 9 [KO:K12755]
102366316  MYL10; myosin light chain 10 [KO:K12756]
102346545  myosin regulatory light chain 2, smooth muscle minor isoform [KO:K12757]
102348776  MYLPF; myosin light chain, phosphorylatable, fast skeletal muscle [KO:K12758]
102361180  PPP1CA; protein phosphatase 1 catalytic subunit alpha [KO:K06269] [EC:3.1.3.16]
102359594  serine/threonine-protein phosphatase PP1-beta catalytic subunit-like [KO:K06269] [EC:3.1.3.16]
102359947  PPP1CB; protein phosphatase 1 catalytic subunit beta [KO:K06269] [EC:3.1.3.16]
102362859  PPP1CC; protein phosphatase 1 catalytic subunit gamma [KO:K06269] [EC:3.1.3.16]
102361284  serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like [KO:K06269] [EC:3.1.3.16]
102356119  PPP1R12A; protein phosphatase 1 regulatory subunit 12A [KO:K06270]
102356480  PPP1R12C; protein phosphatase 1 regulatory subunit 12C [KO:K17457]
102346967  MYLK3; myosin light chain kinase 3 [KO:K00907] [EC:2.7.11.18]
102352251  myosin light chain kinase 3-like [KO:K00907] [EC:2.7.11.18]
102351676  PIP5K1C; phosphatidylinositol-4-phosphate 5-kinase type 1 gamma [KO:K00889] [EC:2.7.1.68]
102355241  PIP5K1A; phosphatidylinositol-4-phosphate 5-kinase type 1 alpha [KO:K00889] [EC:2.7.1.68]
102353988  PIP5K1B; phosphatidylinositol-4-phosphate 5-kinase type 1 beta [KO:K00889] [EC:2.7.1.68]
102366223  actin, cytoplasmic type 5-like [KO:K05692]
102362654  ACTB; actin beta [KO:K05692]
102363413  RASGRF1; Ras protein specific guanine nucleotide releasing factor 1 [KO:K04349]
102347065  CAPN2; calpain-2 catalytic subunit [KO:K03853] [EC:3.4.22.53]
102358724  ACTN1; actinin alpha 1 [KO:K05699]
102356889  ACTN4; actinin alpha 4 [KO:K05699]
102363984  TLN2; talin 2 [KO:K06271]
102361992  TLN1; talin 1 [KO:K06271]
102345455  FLNA; filamin A [KO:K04437]
102360310  FLNB; filamin B [KO:K27392]
102361125  PXN; paxillin [KO:K05760]
102365370  ILK; integrin linked kinase [KO:K06272] [EC:2.7.11.1]
102349526  ZYX; zyxin [KO:K06273]
102351560  VASP; vasodilator-stimulated phosphoprotein [KO:K06274]
102356727  VCL; vinculin [KO:K05700]
102348293  PARVG; parvin gamma [KO:K06275]
106706648  PARVB; parvin beta [KO:K06275]
102364292  PARVA; parvin alpha [KO:K06275]
102346160  PDPK1; 3-phosphoinositide dependent protein kinase 1 [KO:K06276] [EC:2.7.11.1]
102359797  AKT1; AKT serine/threonine kinase 1 [KO:K04456] [EC:2.7.11.1]
102359272  AKT2; AKT serine/threonine kinase 2 [KO:K04456] [EC:2.7.11.1]
102346546  AKT3; AKT serine/threonine kinase 3 [KO:K04456] [EC:2.7.11.1]
102350787  GSK3B; glycogen synthase kinase 3 beta [KO:K03083] [EC:2.7.11.26]
102351770  CTNNB1; catenin beta 1 [KO:K02105]
102361415  PRKCA; protein kinase C alpha [KO:K02677] [EC:2.7.11.13]
102364971  PRKCB; protein kinase C beta [KO:K19662] [EC:2.7.11.13]
102352260  PRKCG; protein kinase C gamma [KO:K19663] [EC:2.7.11.13]
102356941  PTK2; protein tyrosine kinase 2 [KO:K05725] [EC:2.7.10.2]
102351622  PIK3CD; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [KO:K00922] [EC:2.7.1.153]
102350948  PIK3CA; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha [KO:K00922] [EC:2.7.1.153]
102351332  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [KO:K00922] [EC:2.7.1.153]
102359335  PIK3CB; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta [KO:K00922] [EC:2.7.1.153]
102353218  PIK3R1; phosphoinositide-3-kinase regulatory subunit 1 [KO:K02649]
102348007  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649]
102348548  PTEN; phosphatase and tensin homolog [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
102346335  VAV2; vav guanine nucleotide exchange factor 2 [KO:K05730]
102361280  VAV1; vav guanine nucleotide exchange factor 1 [KO:K05730]
102345898  VAV3; vav guanine nucleotide exchange factor 3 [KO:K05730]
102367135  RAC1; ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [KO:K04392]
102352006  ras-related C3 botulinum toxin substrate 1-like [KO:K04392]
102351732  RAC2; ras-related C3 botulinum toxin substrate 2 [KO:K07860]
102364586  RAC3; ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) [KO:K07861]
102349047  PAK1; p21 (RAC1) activated kinase 1 [KO:K04409] [EC:2.7.11.1]
102367003  PAK2; p21 (RAC1) activated kinase 2 [KO:K04410] [EC:2.7.11.1]
102367518  PAK3; p21 (RAC1) activated kinase 3 [KO:K05733] [EC:2.7.11.1]
102367182  PAK4; p21 (RAC1) activated kinase 4 [KO:K05734] [EC:2.7.11.1]
102347021  PAK5; p21 (RAC1) activated kinase 5 [KO:K05736] [EC:2.7.11.1]
102355098  serine/threonine-protein kinase PAK 6-like [KO:K05735] [EC:2.7.11.1]
102358869  CDC42; cell division cycle 42 [KO:K04393]
102362517  BCAR1; BCAR1, Cas family scaffolding protein [KO:K05726]
102355909  breast cancer anti-estrogen resistance protein 1-like [KO:K05726]
102345797  crk-like protein [KO:K04438]
102350481  CRK; CRK proto-oncogene, adaptor protein [KO:K04438]
102352845  crk-like protein [KO:K04438]
102364341  crk-like protein [KO:K04438]
102349010  DOCK1; dedicator of cytokinesis 1 [KO:K13708]
102362033  RAPGEF1; Rap guanine nucleotide exchange factor 1 [KO:K06277]
102354992  RAP1A; RAP1A, member of RAS oncogene family [KO:K04353]
102354357  RAP1B; RAP1B, member of RAS oncogene family [KO:K07836]
102357573  MAPK8; mitogen-activated protein kinase 8 [KO:K04440] [EC:2.7.11.24]
102351693  MAPK9; mitogen-activated protein kinase 9 [KO:K04440] [EC:2.7.11.24]
102351958  MAPK10; mitogen-activated protein kinase 10 [KO:K04440] [EC:2.7.11.24]
102350279  JUN; Jun proto-oncogene, AP-1 transcription factor subunit [KO:K04448]
102358101  transcription factor AP-1-like [KO:K04448]
102365161  BRAF; B-Raf proto-oncogene, serine/threonine kinase [KO:K04365] [EC:2.7.11.1]
102365573  CAV1; caveolin 1 [KO:K06278]
102362627  caveolin-2-like [KO:K12958]
102365324  CAV2; caveolin 2 [KO:K12958]
102354291  caveolin-2-like [KO:K12958]
102362893  CAV3; caveolin 3 [KO:K12959]
102354564  caveolin-3-like [KO:K12959]
102354666  FYN; FYN proto-oncogene, Src family tyrosine kinase [KO:K05703] [EC:2.7.10.2]
102356771  SHC1; SHC adaptor protein 1 [KO:K06279]
102355047  SHC2; SHC adaptor protein 2 [KO:K17447]
102362793  SHC3; SHC adaptor protein 3 [KO:K17448]
102354432  SHC4; SHC adaptor protein 4 [KO:K17449]
102353904  GRB2; growth factor receptor bound protein 2 [KO:K04364]
102347108  SOS1; SOS Ras/Rac guanine nucleotide exchange factor 1 [KO:K03099]
102348404  SOS2; SOS Ras/Rho guanine nucleotide exchange factor 2 [KO:K03099]
102355427  HRAS; HRas proto-oncogene, GTPase [KO:K02833]
102357545  RAF1; Raf-1 proto-oncogene, serine/threonine kinase [KO:K04366] [EC:2.7.11.1]
102358560  MAP2K1; mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
102355992  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
102354262  mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
102363355  ETS domain-containing protein Elk-1-like [KO:K04375]
102351917  ELK1; ELK1, ETS transcription factor [KO:K04375]
102361167  CCND1; cyclin D1 [KO:K04503]
102367471  G1/S-specific cyclin-D1-like [KO:K04503]
102351286  CCND2; cyclin D2 [KO:K10151]
102345953  G1/S-specific cyclin-D2-like [KO:K10151]
102364182  BIRC2; baculoviral IAP repeat containing 2 [KO:K16060]
102349446  XIAP; X-linked inhibitor of apoptosis [KO:K04725] [EC:2.3.2.27]
102363793  BAD; BCL2 associated agonist of cell death [KO:K02158]
Compound
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Berman AE, Kozlova NI, Morozevich GE.
  Title
Integrins: structure and signaling.
  Journal
Biochemistry (Mosc) 68:1284-99 (2003)
DOI:10.1023/b:biry.0000011649.03634.74
Reference
  Authors
Lee JW, Juliano R.
  Title
Mitogenic signal transduction by integrin- and growth factor receptor-mediated pathways.
  Journal
Mol Cells 17:188-202 (2004)
Reference
  Authors
Danen EH, Yamada KM.
  Title
Fibronectin, integrins, and growth control.
  Journal
J Cell Physiol 189:1-13 (2001)
DOI:10.1002/jcp.1137
Reference
  Authors
Guo W, Giancotti FG.
  Title
Integrin signalling during tumour progression.
  Journal
Nat Rev Mol Cell Biol 5:816-26 (2004)
DOI:10.1038/nrm1490
Reference
  Authors
Petit V, Thiery JP.
  Title
Focal adhesions: structure and dynamics.
  Journal
Biol Cell 92:477-94 (2000)
DOI:10.1016/S0248-4900(00)01101-1
Reference
  Authors
Stupack DG, Cheresh DA.
  Title
Get a ligand, get a life: integrins, signaling and cell survival.
  Journal
J Cell Sci 115:3729-38 (2002)
DOI:10.1242/jcs.00071
Reference
  Authors
Parsons JT.
  Title
Focal adhesion kinase: the first ten years.
  Journal
J Cell Sci 116:1409-16 (2003)
DOI:10.1242/jcs.00373
Reference
  Authors
Mitra SK, Hanson DA, Schlaepfer DD.
  Title
Focal adhesion kinase: in command and control of cell motility.
  Journal
Nat Rev Mol Cell Biol 6:56-68 (2005)
DOI:10.1038/nrm1549
Reference
  Authors
Comoglio PM, Boccaccio C, Trusolino L.
  Title
Interactions between growth factor receptors and adhesion molecules: breaking the rules.
  Journal
Curr Opin Cell Biol 15:565-71 (2003)
DOI:10.1016/S0955-0674(03)00096-6
Reference
  Authors
Schlaepfer DD, Mitra SK.
  Title
Multiple connections link FAK to cell motility and invasion.
  Journal
Curr Opin Genet Dev 14:92-101 (2004)
DOI:10.1016/j.gde.2003.12.002
Reference
  Authors
Burridge K, Wennerberg K.
  Title
Rho and Rac take center stage.
  Journal
Cell 116:167-79 (2004)
DOI:10.1016/S0092-8674(04)00003-0
Reference
  Authors
Schmitz AA, Govek EE, Bottner B, Van Aelst L.
  Title
Rho GTPases: signaling, migration, and invasion.
  Journal
Exp Cell Res 261:1-12 (2000)
DOI:10.1006/excr.2000.5049
Reference
  Authors
Vanhaesebroeck B, Alessi DR.
  Title
The PI3K-PDK1 connection: more than just a road to PKB.
  Journal
Biochem J 346 Pt 3:561-76 (2000)
DOI:10.1042/bj3460561
Reference
  Authors
Nicholson KM, Anderson NG.
  Title
The protein kinase B/Akt signalling pathway in human malignancy.
  Journal
Cell Signal 14:381-95 (2002)
DOI:10.1016/S0898-6568(01)00271-6
Reference
  Authors
Oloumi A, McPhee T, Dedhar S.
  Title
Regulation of E-cadherin expression and beta-catenin/Tcf transcriptional activity by the integrin-linked kinase.
  Journal
Biochim Biophys Acta 1691:1-15 (2004)
DOI:10.1016/j.bbamcr.2003.12.002
Reference
  Authors
Turner CE.
  Title
Paxillin and focal adhesion signalling.
  Journal
Nat Cell Biol 2:E231-6 (2000)
DOI:10.1038/35046659
Reference
  Authors
Hlobilkova A, Knillova J, Bartek J, Lukas J, Kolar Z.
  Title
The mechanism of action of the tumour suppressor gene PTEN.
  Journal
Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 147:19-25 (2003)
Related
pathway
lcm04010  MAPK signaling pathway
lcm04060  Cytokine-cytokine receptor interaction
lcm04070  Phosphatidylinositol signaling system
lcm04110  Cell cycle
lcm04310  Wnt signaling pathway
lcm04512  ECM-receptor interaction
lcm04810  Regulation of actin cytoskeleton
KO pathway
ko04510   
LinkDB

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