SSDB Best Search Result

Entry:brp:103855218 (921 a.a.)
Name:DNA topoisomerase 3-alpha isoform X1
KO:K03165 DNA topoisomerase III
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Search Result : 210 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ath:AT5G63920 topoisomerase 3alpha                      K03165     926     5856     0.912      923     
cit:102618169 DNA topoisomerase 3-alpha                 K03165     940     4756     0.748      919     
vvi:100248256 DNA topoisomerase 3-alpha isoform X3      K03165     919     4564     0.713      921     
rcu:8280375 DNA topoisomerase 3-alpha isoform X3        K03165     886     4549     0.723      915     
mdm:103431441 DNA topoisomerase 3-alpha                 K03165     969     4528     0.681      977     
csv:101209351 DNA topoisomerase 3-alpha isoform X1      K03165     924     4504     0.695      931     
mtr:11428648 DNA topoisomerase 3-alpha isoform X1       K03165     931     4496     0.691      932     
sly:101262415 DNA topoisomerase 3-alpha isoform X1      K03165     915     4462     0.691      928     
gmx:100818971 DNA topoisomerase 3-alpha isoform X1      K03165     913     4376     0.689      919     
zma:100273582 uncharacterized protein LOC100273582      K03165     915     4366     0.696      925     
osa:9269718 DNA topoisomerase 3-alpha                   K03165     928     4288     0.671      931     
gga:416517 DNA topoisomerase 3-alpha isoform 1          K03165    1020     2516     0.428      920     
fca:101086515 DNA topoisomerase 3-alpha isoform X1      K03165     987     2508     0.441      917     
ecb:100051666 DNA topoisomerase 3-alpha isoform X1      K03165    1007     2493     0.433      919     
hsa:7156 DNA topoisomerase III alpha                    K03165    1001     2487     0.433      917     
mcc:700830 DNA topoisomerase 3-alpha                    K03165    1001     2477     0.430      918     
cfa:489537 DNA topoisomerase 3-alpha                    K03165     989     2473     0.432      920     
bta:527411 DNA topoisomerase 3-alpha                    K03165    1002     2470     0.434      916     
mmu:21975 topoisomerase (DNA) III alpha                 K03165    1003     2470     0.436      921     
xtr:100135734 DNA topoisomerase 3-alpha                 K03165    1021     2442     0.427      926     
xla:444125 DNA topoisomerase III alpha L homeolog       K03165    1022     2436     0.424      913     
dre:560212 DNA topoisomerase 3-alpha                    K03165     998     2400     0.442      926     
ola:101168371 DNA topoisomerase 3-alpha                 K03165    1024     2391     0.421      924     
mdo:100029388 topoisomerase (DNA) III alpha             K03165     970     2389     0.436      907     
ssc:110256129 DNA topoisomerase 3-alpha isoform X1      K03165    1012     2385     0.420      912     
rno:303194 DNA topoisomerase 3-alpha isoform X1         K03165     948     2379     0.432      891     
bmor:101744626 DNA topoisomerase 3-alpha isoform X1     K03165    1016     2191     0.402      938     
tca:662387 DNA topoisomerase 3-alpha                    K03165     976     2162     0.404      978     
aag:5569510 DNA topoisomerase 3-alpha                   K03165    1021     2112     0.387      1016    
aga:1279455 DNA topoisomerase 3-alpha                   K03165    1008     2014     0.371      1003    
ame:410571 DNA topoisomerase 3-alpha                    K03165    1012     2013     0.365      964     
dme:Dmel_CG10123 topoisomerase 3alpha                   K03165    1250     1962     0.387      937     
ddi:DDB_G0275257 DNA topoisomerase III                  K03165     828     1946     0.427      740     
cne:CNJ00400 DNA topoisomerase type I, putative         K03165    1037     1812     0.358      963     
pti:PHATRDRAFT_47417 hypothetical protein               K03165    1009     1686     0.342      1015    
cel:CELE_Y56A3A.27 DNA topoisomerase 3                  K03165     759     1643     0.428      626     
lma:LMJF_36_3200 putative DNA topoisomerase III         K03165     947     1628     0.351      963     
tbr:Tb11.01.1280 DNA topoisomerase III, putative        K03165     918     1612     0.356      937     
tps:THAPSDRAFT_33625 topoisomerase                      K03165     672     1554     0.416      681     
afm:AFUA_2G02660 DNA topoisomerase III                  K03165     629     1529     0.412      629     
aor:AO090026000611 unnamed protein product; DNA topoiso K03165     629     1525     0.416      630     
fgr:FGSG_06716 hypothetical protein                     K03165     695     1491     0.402      645     
pfa:PF3D7_1347100 DNA topoisomerase 3, putative         K03165     710     1486     0.367      714     
mgr:MGG_11342 DNA topoisomerase III                     K03165     669     1482     0.398      658     
cal:CAALFM_C304740CA DNA topoisomerase 3                K03165     629     1479     0.386      643     
ani:ANIA_04555 DNA topoisomerase 3                      K03165     629     1467     0.400      625     
spo:2539881 DNA topoisomerase III                       K03165     622     1459     0.400      605     
ncr:NCU00081 DNA topoisomerase 3-beta                   K03165     695     1443     0.386      663     
kla:KLLA0_F20724g uncharacterized protein               K03165     659     1409     0.370      668     
sce:YLR234W DNA topoisomerase 3                         K03165     656     1400     0.385      646     
ocu:100345272 DNA topoisomerase 3-beta-1 isoform X1     K03165     862     1395     0.327      899     
cre:CHLRE_17g725100v5 uncharacterized protein           K03165     882     1303     0.370      652     
mba:Mbar_A2128 DNA topoisomerase, type I                K03168     855     1069     0.322      736     
hvo:HVO_0681 DNA topoisomerase 1                        K03168     840      970     0.302      706     
pai:PAE2993 DNA topoisomerase (topA)                    K03168     602      965     0.320      621     
tac:Ta0063 DNA topoisomerase III beta related protein   K03168     770      831     0.261      832     
afu:AF_1806 DNA topoisomerase I (topA)                  K03168     663      815     0.265      713     
mja:MJ_1652 DNA topoisomerase I (topA) {Bacillus subtil K03168     761      793     0.267      711     
mth:MTH_1624 DNA topoisomerase I                        K03168     718      743     0.262      744     
mmp:MMP0956 DNA topoisomerase I                         K03168     823      704     0.241      696     
hma:rrnAC1645 DNA topoisomerase I                       K03168    1364      697     0.301      525     
hal:VNG_0349G DNA topoisomerase I                       K03168     663      643     0.290      518     
ape:APE_1794 DNA topoisomerase I                        K03168     673      622     0.275      644     
gsu:GSU2549 DNA topoisomerase I                         K03168     757      582     0.261      682     
cac:CA_C2947 Topoisomerase B                            K03169     728      579     0.269      752     
mca:MCA2839 DNA topoisomerase I                         K03168     768      575     0.260      705     
rsp:RSP_2178 DNA topoisomerase I                        K03168     884      567     0.265      637     
bsu:BSU16120 DNA topoisomerase 1                        K03168     691      561     0.256      656     
pde:Pden_0659 DNA topoisomerase I                       K03168     851      555     0.257      661     
ban:BA_3971 DNA topoisomerase                           K03168     692      555     0.262      629     
btk:BT9727_3574 DNA topoisomerase I                     K03168     692      554     0.261      629     
ngo:NGO_1863 DNA topoisomerase I                        K03168     768      541     0.238      815     
mta:Moth_1026 DNA topoisomerase I                       K03168     697      533     0.260      630     
nme:NMB0118 DNA topoisomerase I                         K03168     768      532     0.235      771     
bce:BC3831 DNA topoisomerase I                          K03168     662      529     0.252      634     
lmo:lmo1275 DNA topoisomerase I                         K03168     692      524     0.255      640     
lin:topA highly similar to DNA topoisomerase I TopA     K03168     692      522     0.256      640     
hdu:HD_1385 DNA topoisomerase I                         K03168     867      515     0.252      691     
cdf:CD630_22750 DNA topoisomerase III                   K03169     706      512     0.249      718     
lpn:lpg2599 DNA topoisomerase I                         K03168     759      511     0.245      691     
ppu:PP_2139 DNA topoisomerase I                         K03168     869      511     0.254      618     
llm:llmg_1272 DNA topoisomerase I                       K03168     708      506     0.245      661     
tth:TT_C1931 DNA topoisomerase I                        K03168     824      506     0.271      701     
cpe:CPE1508 DNA topoisomerase III                       K03169     728      506     0.238      723     
cbo:CBO1289 putative DNA topoisomerase                  K03169     731      503     0.242      736     
reh:H16_A3704 DNA topoisomerase III                     K03169     895      503     0.254      700     
aci:ACIAD0493 DNA topoisomerase type I, omega protein   K03168     881      502     0.242      706     
sao:SAOUHSC_01222 DNA topoisomerase I                   K03168     691      500     0.244      675     
rru:Rru_A3202 DNA topoisomerase                         K03168     915      500     0.257      649     
lla:L0298 DNA topoisomerase I                           K03168     710      500     0.243      659     
cje:Cj1686c DNA topoisomerase I                         K03168     700      500     0.250      643     
psb:Psyr_3287 DNA topoisomerase I                       K03168     870      498     0.258      613     
mlo:mlr0839 DNA topoisomerase I                         K03168     873      497     0.252      650     
pae:PA3011 DNA topoisomerase I                          K03168     868      496     0.252      618     
acb:A1S_0439 DNA topoisomerase type I omega protein     K03168     878      495     0.243      625     
pst:PSPTO_3514 DNA topoisomerase I                      K03168     869      495     0.255      611     
xac:XAC3807 DNA topoisomerase I                         K03168     830      495     0.254      568     
sau:SA1093 DNA topoisomerase I topA homolog; ORFID:SA10 K03168     689      495     0.243      675     
avn:Avin_14470 DNA topoisomerase I                      K03168     868      494     0.264      618     
dvu:DVU_3389 DNA topoisomerase I                        K03168     760      494     0.244      688     
cpn:CPn_0769 DNA Topoisomerase I-Fused to SWI Domain    K03168     871      493     0.241      729     
spr:spr1141 DNA topoisomerase I                         K03168     701      492     0.238      672     
bja:blr5111 DNA topoisomerase I                         K03168     828      491     0.246      630     
spn:SP_1263 DNA topoisomerase I                         K03168     699      491     0.238      672     
cte:CT0055 DNA topoisomerase I                          K03168     799      491     0.234      675     
xom:XOO0540 DNA topoisomerase I                         K03168     830      489     0.246      570     
efa:EF1650 DNA topoisomerase I                          K03168     692      489     0.230      648     
xcc:XCC3755 DNA topoisomerase I                         K03168     831      489     0.252      568     
ddd:Dda3937_00587 DNA topoisomerase I, omega subunit    K03168     867      488     0.248      610     
ccr:CC_2451 DNA topoisomerase I                         K03168     899      487     0.244      660     
ser:SERP0816 DNA topoisomerase I                        K03168     689      486     0.228      683     
smar:SM39_2191 DNA topoisomerase III                    K03169     641      485     0.266      659     
rpa:TX73_016155 type I DNA topoisomerase                K03168     911      484     0.232      854     
ctr:CT_643 DNA topoisomerase I                          K03168     857      483     0.249      696     
cau:Caur_3917 DNA topoisomerase I                       K03168     776      482     0.235      752     
tel:tll1881 DNA topoisomerase I                         K03168     887      479     0.267      528     
enc:ECL_00407 DNA topoisomerase III                     K03169     717      478     0.256      632     
ctb:CTL0011 DNA topoisomerase I                         K03168     857      478     0.247      696     
apl:APL_0696 DNA topoisomerase 1                        K03168     869      477     0.250      605     
ftu:FTT_0906c DNA topoisomerase I                       K03168     764      477     0.232      714     
vvu:VV1_2130 DNA topoisomerase I                        K03168     874      477     0.242      690     
xfa:XF_0920 DNA topoisomerase I                         K03168     815      477     0.245      547     
rso:RSc0066 probable dna topoisomerase III protein      K03169     877      477     0.246      711     
sai:Saci_1371 DNA topoisomerase I family A              K03168     668      475     0.241      648     
sso:SSO0907 DNA topoisomerase I family A (topA)         K03168     668      475     0.232      611     
tko:TK1091 DNA topoisomerase I                          K03168    1229      474     0.270      403     
cro:ROD_12951 DNA topoisomerase III                     K03169     648      471     0.273      626     
atu:Atu1304 DNA topoisomerase I                         K03168     892      471     0.232      652     
ypk:y2156 DNA topoisomerase III                         K03169     641      470     0.258      651     
ype:YPO2165 DNA topoisomerase III                       K03169     642      470     0.258      651     
eam:EAMY_1908 DNA topoisomerase I                       K03168     865      469     0.251      597     
yps:YPTB2091 DNA topoisomerase III                      K03169     642      468     0.258      651     
ecs:ECs_1846 DNA topoisomerase I                        K03168     865      467     0.244      611     
ece:Z2536 DNA topoisomerase type I, omega protein       K03168     865      467     0.244      611     
vpa:VP1022 DNA topoisomerase I                          K03168     876      466     0.245      593     
seo:STM14_2075 DNA topoisomerase I                      K03168     865      465     0.248      625     
sty:STY1336 DNA topoisomerase I, omega protein I        K03168     865      465     0.248      625     
stm:STM1714 DNA topoisomerase type I, omega protein     K03168     865      465     0.248      625     
eco:b1274 DNA topoisomerase 1                           K03168     865      465     0.244      611     
ecj:JW1266 DNA topoisomerase I, omega subunit           K03168     865      465     0.244      611     
bms:BRA0604 DNA topoisomerase I                         K03168     877      462     0.245      652     
pmu:PM0615 TopA                                         K03168     868      462     0.246      729     
bme:BMEII0666 DNA topoisomerase i                       K03168     901      461     0.244      652     
yen:YE2257 DNA topoisomerase III                        K03169     642      460     0.258      660     
vfi:VF_1051 DNA topoisomerase I, omega subunit          K03168     876      460     0.241      607     
ljo:LJ_1108 DNA topoisomerase I                         K03168     693      458     0.228      623     
bpe:BP0460 DNA topoisomerase iii                        K03169     875      458     0.260      705     
son:SO_2705 DNA topoisomerase I TopA                    K03168     878      458     0.248      601     
sme:SMc01364 Putative DNA topoisomerase I               K03168     900      458     0.229      652     
rco:RC0449 DNA topoisomerase I                          K03168     776      458     0.228      613     
lpl:lp_1850 DNA topoisomerase                           K03168     715      457     0.242      636     
smu:SMU_1002 putative DNA topoisomerase I               K03168     705      457     0.240      676     
lcb:LCABL_16250 DNA topoisomerase I                     K03168     694      456     0.230      660     
bmf:BAB2_0636 DNA topoisomerase I:DNA topoisomerase I,  K03168     877      456     0.242      652     
sfl:SF1460 DNA topoisomerase III                        K03169     653      455     0.272      626     
vch:VC_1730 DNA topoisomerase I                         K03168     876      455     0.239      614     
kpn:KPN_01270 DNA topoisomerase I                       K03168     865      454     0.240      624     
bma:BMA0139 DNA topoisomerase III                       K03169     869      453     0.245      661     
bps:BPSL0118 putative DNA topoisomerase III             K03169     869      453     0.245      661     
bxe:Bxe_A4419 DNA topoisomerase III                     K03169     888      448     0.245      697     
buc:BU284 DNA topoisomerase I                           K03168     861      448     0.237      591     
wol:WD_1133 DNA topoisomerase I                         K03168     816      447     0.240      649     
aae:aq_886 reverse gyrase                               K03170    1146      447     0.256      606     
spy:SPy_1164 putative DNA topoisomerase I               K03168     709      445     0.232      652     
mpn:MPN_261 DNA topoisomerase I                         K03168     711      445     0.247      656     
hin:HI_1365 DNA topoisomerase I (topA)                  K03168     868      445     0.252      652     
eca:ECA2337 DNA topoisomerase III                       K03169     641      444     0.268      626     
rpr:RP326 DNA TOPOISOMERASE I (topA)                    K03168     776      444     0.223      592     
hth:HTH_0489 DNA topoisomerase I                        K03168     532      442     0.266      497     
rha:RHA1_ro04353 DNA topoisomerase I                    K03168     973      440     0.272      541     
ret:RHE_CH01638 DNA topoisomerase I protein             K03168     884      438     0.228      648     
syn:slr2058 DNA topoisomerase I                         K03168     898      437     0.237      519     
syf:Synpcc7942_1416 DNA topoisomerase I                 K03168     883      436     0.256      532     
syc:syc0139_c DNA topoisomerase I                       K03168     883      436     0.256      532     
tma:TM0258 DNA topoisomerase                            K03168     633      432     0.271      531     
mab:MAB_0489 DNA topoisomerase I (Omega-protein)        K03168     930      428     0.254      540     
pfu:PF0494 DNA topoisomerase I                          K03168    1060      428     0.271      373     
msm:MSMEG_6157 DNA topoisomerase I                      K03168     936      427     0.256      640     
tde:TDE_1208 DNA topoisomerase I                        K03168     721      427     0.241      676     
pma:Pro_0432 Topoisomerase IA                           K03168     872      427     0.241      564     
rle:RL1735 putative DNA topoisomerase I                 K03168     884      426     0.230      649     
sco:SCO3543 probable DNA topoisomerase I                K03168     952      426     0.257      525     
fnu:FN1069 DNA topoisomerase I                          K03168     756      426     0.246      540     
npu:Npun_R4571 DNA topoisomerase I                      K03168     886      425     0.244      516     
gvi:glr3198 ORF_ID:glr3198                              K03168     765      423     0.257      651     
hpy:HP_0116 DNA topoisomerase I (topA)                  K03168     736      420     0.222      623     
sgu:SGLAU_18605 DNA topoisomerase 1                     K03168     950      418     0.253      526     
cdi:DIP0327 DNA topoisomerase I                         K03168     964      417     0.260      576     
amd:AMED_8794 DNA topoisomerase IA                      K03168     951      416     0.271      546     
ana:alr2780 DNA topoisomerase I                         K03168     881      416     0.244      517     
sma:SAVERM_4621 putative DNA topoisomerase I            K03168     942      411     0.272      536     
eba:ebA2963 DNA topoisomerase III                       K03169     857      410     0.240      633     
mge:MG_122 DNA topoisomerase I                          K03168     709      406     0.227      701     
ksk:KSE_35790 putative DNA topoisomerase I              K03168     957      405     0.260      530     
vg:80531318 Chrysochromulina parva virus; DNA topoisome            789      401     0.227      688     
bfr:BF0144 Exc protein                                  K03169     695      400     0.246      641     
bth:BT_0105 DNA topoisomerase I (Omega-protein)         K03169     693      400     0.245      641     
sct:SCAT_2857 DNA topoisomerase 1                       K03168     959      399     0.249      522     
hpj:jhp_0108 DNA TOPOISOMERASE I                        K03168     736      398     0.215      623     
cgl:Cgl0309 Topoisomerase IA                            K03168     996      394     0.246      581     
blo:BL1469 DNA topoisomerase III                        K03169     878      393     0.257      716     
mle:ML0200 putative DNA topoisomerase I                 K03168     947      393     0.261      625     
sgr:SGR_3301 putative DNA topoisomerase I               K03168     963      390     0.258      569     
fps:FP1975 DNA topoisomerase I                          K03168     838      388     0.254      481     
dra:DR_1374 DNA topoisomerase I                         K03168    1021      384     0.232      581     
tpa:TP_0394 DNA topoisomerase I (topA)                  K03168     731      381     0.233      635     
mtu:Rv3646c DNA topoisomerase I                         K03168     934      378     0.246      552     
mtc:MT3749 DNA topoisomerase I                          K03168     934      378     0.246      552     
bbu:BB_0828 DNA topoisomerase I                         K03168     848      360     0.219      572     
lil:LA_1721 DNA topoisomerase                           K03168     613      349     0.222      677     

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