SSDB Best Search Result

Entry:pvx:PVX_113270 (1387 a.a.)
Name:ATP dependent RNA helicase, putative
KO:K12598 ATP-dependent RNA helicase DOB1
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Search Result : 143 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
pfa:PF3D7_0602100 ATP-dependent RNA helicase, putative  K12598    1350     5716     0.655      1398    
ola:100304468 exosome RNA helicase MTR4                 K12598    1036     2219     0.363      1246    
ocu:100347578 exosome RNA helicase MTR4                 K12598    1040     2218     0.356      1254    
ecb:100051945 superkiller viralicidic activity 2-like 2 K12598    1042     2213     0.356      1255    
cal:CAALFM_C703400CA ATP-dependent RNA helicase         K12598    1062     2211     0.363      1263    
bta:520256 exosome RNA helicase MTR4                    K12598    1040     2210     0.359      1254    
cfa:607950 exosome RNA helicase MTR4                    K12598    1042     2204     0.357      1255    
mcc:706419 exosome RNA helicase MTR4                    K12598    1042     2203     0.354      1264    
hsa:23517 Mtr4 exosome RNA helicase                     K12598    1042     2202     0.355      1265    
xla:108718355 exosome RNA helicase MTR4 isoform X1      K12598    1031     2201     0.357      1231    
ssc:100518521 superkiller viralicidic activity 2-like 2 K12598    1042     2201     0.355      1255    
mmu:72198 Mtr4 exosome RNA helicase                     K12598    1040     2201     0.354      1255    
gga:427137 exosome RNA helicase MTR4                    K12598    1029     2199     0.359      1234    
sce:YJL050W ATP-dependent RNA helicase MTR4             K12598    1073     2189     0.366      1198    
fca:101088299 exosome RNA helicase MTR4 isoform X1      K12598    1042     2188     0.354      1255    
rno:365668 exosome RNA helicase MTR4                    K12598    1042     2187     0.352      1257    
xtr:100496866 exosome RNA helicase MTR4                 K12598    1031     2186     0.351      1234    
dme:Dmel_CG4152 Mtr4 helicase                           K12598    1055     2185     0.352      1290    
tca:658969 superkiller viralicidic activity 2-like 2    K12598    1034     2184     0.367      1222    
spo:2541639 TRAMP complex ATP-dependent RNA helicase su K12598    1117     2181     0.375      1169    
mdo:100017078 Ski2 like RNA helicase 2                  K12598    1033     2177     0.355      1243    
ddi:DDB_G0275633 DEAD/DEAH box helicase                 K12598    1128     2170     0.346      1322    
aga:1278973 exosome RNA helicase MTR4                   K12598    1036     2161     0.367      1184    
aag:5571427 superkiller viralicidic activity 2-like 2   K12598    1035     2159     0.355      1255    
kla:KLLA0_F01364g uncharacterized protein               K12598    1073     2150     0.353      1268    
dre:406795 exosome RNA helicase MTR4                    K12598    1034     2146     0.347      1241    
mtr:11442551 DExH-box ATP-dependent RNA helicase DExH9  K12598     983     2142     0.365      1163    
ani:ANIA_04412 ATP-dependent RNA helicase MTR4          K12598    1073     2142     0.350      1255    
cne:CND05090 conserved hypothetical protein             K12598    1068     2140     0.346      1298    
afm:AFUA_4G07160 ATP dependent RNA helicase (Dob1)      K12598    1082     2129     0.353      1262    
bmor:101743187 exosome RNA helicase MTR4                K12598    1030     2110     0.366      1204    
ame:551637 exosome RNA helicase MTR4                    K12598    1035     2110     0.361      1159    
aor:AO090023000859 unnamed protein product; nuclear exo K12598    1080     2104     0.359      1160    
fgr:FGSG_01656 ATP-dependent RNA helicase DOB1          K12598    1094     2098     0.355      1275    
ncr:NCU03363 FRQ-interacting RNA helicase               K12598    1106     2074     0.348      1323    
mgr:MGG_03931 FRQ-interacting RNA helicase              K12598    1102     2045     0.333      1308    
csv:101203071 DExH-box ATP-dependent RNA helicase DExH9 K12598     994     2040     0.356      1180    
gmx:100804792 DExH-box ATP-dependent RNA helicase DExH9 K12598     981     2034     0.357      1165    
tps:THAPSDRAFT_34661 helicase                           K12598     947     2026     0.352      1151    
mdm:103441992 DExH-box ATP-dependent RNA helicase DExH9 K12598    1000     2020     0.347      1170    
pti:PHATRDRAFT_50326 hypothetical protein               K12598     998     2019     0.346      1220    
rcu:8262570 DExH-box ATP-dependent RNA helicase DExH9   K12598     991     2012     0.356      1169    
osa:9268439 DExH-box ATP-dependent RNA helicase DExH9   K12598    1001     2008     0.344      1180    
zma:103638180 DExH-box ATP-dependent RNA helicase DExH9 K12598    1000     1992     0.340      1179    
ath:AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 pr K12598     988     1989     0.346      1180    
vvi:100246661 DExH-box ATP-dependent RNA helicase DExH1 K12598     995     1987     0.341      1169    
cit:102611776 DExH-box ATP-dependent RNA helicase DExH1 K12598     988     1984     0.340      1172    
sly:101262619 DExH-box ATP-dependent RNA helicase DExH1 K12598     996     1983     0.357      1176    
cel:CELE_W08D2.7 mRNA transport homolog 4               K12598    1026     1958     0.345      1261    
cre:CHLRE_02g117900v5 uncharacterized protein           K12598    1130     1935     0.349      1207    
lma:LMJF_36_3000 putative ATP-dependent RNA helicase    K12598     968     1797     0.337      1154    
tbr:Tb10.6k15.3220 ATP-dependent DEAD/H RNA helicase, p K12598     950     1778     0.324      1153    
tel:tlr0350 ORF_ID:tlr0350; putative helicase                      889     1086     0.388      521     
cgl:Cgl1489 Superfamily II DNA and RNA helicases        K03727     929     1052     0.360      511     
ana:alr0489 putative helicase                                      893     1045     0.386      502     
syf:Synpcc7942_1324 DEAD/DEAH box helicase-like                    919     1043     0.379      541     
syc:syc0229_d putative helicase                                    919     1042     0.379      541     
npu:Npun_R1696 DSH domain protein                                  891     1041     0.375      523     
vg:5659981 Paramecium bursaria Chlorella virus AR158; H K26918     725     1039     0.322      662     
sma:SAVERM_6695 putative ATP-dependent RNA helicase     K03727     937     1033     0.331      599     
sgr:SGR_5873 putative ATP-dependent RNA helicase        K03727     946     1022     0.326      610     
sgu:SGLAU_06725 putative helicase HelY                  K03727     950     1018     0.329      592     
sco:SCO1631 putative helicase                           K03727     950     1018     0.328      588     
ksk:KSE_67200 putative ATP-dependent helicase           K03727     967     1016     0.343      581     
pma:Pro_1621 Superfamily II RNA helicase                           925     1012     0.333      642     
sct:SCAT_5185 putative helicase helY                    K03727     947     1008     0.348      549     
gvi:gll2595 ORF_ID:gll2595; probable helicase                      879     1003     0.361      527     
cdi:DIP1239 Putative helicase                           K03727     930      986     0.330      531     
amd:AMED_4878 ATP-dependent RNA helicase HelY           K03727     943      975     0.344      572     
mtu:Rv2092c ATP-dependent DNA helicase HelY             K03727     906      975     0.346      497     
mtc:MT2153 ATP-dependent RNA helicase, DEAD/DEAH box fa K03727     906      975     0.346      497     
mle:ML1333 probable helicase, Ski2 subfamily            K03727     920      961     0.347      505     
syn:slr0451 antiviral protein                                     1006      943     0.334      586     
msm:MSMEG_3885 DEAD/DEAH box helicase                   K03727     912      941     0.340      497     
mab:MAB_2189 Probable ATP-dependent DNA helicase HelY   K03727     922      931     0.339      522     
blo:BL0742 probable helicase                            K03727     863      929     0.345      522     
rha:RHA1_ro00835 probable ATP-dependent helicase        K03727     911      923     0.338      515     
sai:Saci_0263 DNA helicase                              K03726     705      500     0.260      547     
sto:STK_05900 Holliday junction migration helicase      K03726     704      497     0.270      597     
sso:SSO2462 DNA helicase related protein                K03726     715      472     0.267      513     
nmr:Nmar_0243 DEAD/DEAH box helicase domain protein     K03726     709      453     0.288      430     
tac:Ta0835 DNA helicase related protein                 K03726     674      444     0.257      494     
ape:APE_0191.1 holliday junction migration helicase     K03726     735      439     0.275      414     
hvo:HVO_2955 DEAD/DEAH box helicase                                779      429     0.250      535     
mmp:MMP0890 superfamily II helicase                     K03726     747      422     0.247      550     
hal:VNG_2213G pre-mRNA splicing helicase                           779      415     0.255      525     
mba:Mbar_A3508 helicase                                 K03726     729      411     0.270      423     
pai:PAE0894 ATP-dependent, DNA binding helicase         K03726     704      409     0.282      400     
pfu:PF0677 helicase                                     K03726     720      407     0.266      533     
hma:rrnAC2961 Pre-mRNA splicing helicase                           823      404     0.236      754     
mth:MTH_810 DNA helicase related protein                K03726     690      388     0.243      506     
mja:MJ_1124 putative SKI2-family helicase               K03726    1195      357     0.272      404     
bxe:Bxe_A1793 Helicase-like protein                                882      352     0.272      437     
hth:HTH_1914 putative ski2-type helicase                K03726     745      322     0.238      467     
ddd:Dda3937_01302 Helicase conserved C-terminal domain             858      309     0.233      497     
aae:aq_1328 hypothetical protein                                   764      297     0.265      427     
tko:TK1332 RNA helicase Ski2 homolog                    K03726    1125      293     0.251      454     
ret:RHE_PF00102 putative DNA helicase protein                     1207      237     0.223      578     
cpe:CPE2102 probable ATP-dependent RNA helicase         K17675     585      235     0.251      346     
cac:CA_C0778 ATP-dependent RNA helicase, superfamily II K17675     585      232     0.256      270     
cbo:CBO1365 putative helicase                           K17675     588      216     0.216      296     
psb:Psyr_5115 Helicase, C-terminal:DEAD/DEAH box helica           1205      193     0.217      508     
ljo:LJ_1760 hypothetical protein                        K03724     740      192     0.225      405     
afu:AF_2406 ATP-dependent RNA helicase, putative        K06877     766      187     0.253      198     
rru:Rru_A0511 DEAD/DEAH box helicase                               869      185     0.226      424     
eba:ebA4984 conserved hypothetical protein              K17675     703      184     0.290      124     
kpn:KPN_pKPN3p05866 hypothetical ATP-dependent helicase K03724     731      172     0.232      560     
eco:b2627 putative helicase YfjK                                   729      164     0.228      517     
ecj:JW2608 conserved hypothetical protein                          729      164     0.228      517     
ccr:CC_0657 photosynthesis protein modulator            K17675     824      161     0.350      80      
bsu:BSU22220 ATP-dependent helicase YprA                K06877     749      161     0.221      208     
pae:PA3272 ATP-dependent DNA helicase                   K03724    1448      157     0.317      218     
rsp:RSP_0224 ATP-dependent helicase                     K03724     723      148     0.310      174     
tth:TT_P0128 hypothetical protein                       K03654    1649      146     0.260      154     
xac:XAC2450 ATP-dependent DNA helicase                  K03724    1480      145     0.281      231     
pst:PSPTO_5007 ATP-independent RNA helicase DbpA        K05591     459      144     0.215      311     
cte:CT0653 transcription-repair coupling factor         K03723    1113      144     0.282      170     
bth:BT_3938 ATP-dependent DNA helicase recQ             K03654     634      142     0.268      205     
mca:MCA1579 ATP-dependent RNA helicase, DEAD/DEAH box f K03724    1412      141     0.266      207     
xcc:XCC2317 ATP-dependent DNA helicase                  K03724    1464      135     0.317      224     
smar:SM39_4308 ATP-dependent DNA helicase               K03654     610      134     0.393      89      
ppu:PP_1103 ATP-dependent helicase, DEAD box family     K03724     816      133     0.290      145     
rle:RL0582 putative ATP-dependent helicase              K03724     836      132     0.251      215     
mlo:mlr5610 probable ATP dependent DNA helicase         K03724     844      132     0.257      171     
sty:STY3601 ATP-dependent DNA helicase                  K03654     609      131     0.402      82      
eam:EAMY_0198 ATP-dependent DNA helicase RecQ           K03654     610      130     0.348      89      
yps:YPTB0202 ATP-dependent DNA helicase                 K03654     610      130     0.360      89      
ypk:y0397 ATP-dependent DNA helicase                    K03654     610      130     0.360      89      
ype:YPO3833 ATP-dependent DNA helicase                  K03654     610      130     0.360      89      
seo:STM14_4761 ATP-dependent DNA helicase RecQ          K03654     615      129     0.402      82      
stm:STM3958 ATP-dependent DNA helicase                  K03654     615      129     0.402      82      
yen:YE0204 ATP-dependent DNA helicase                   K03654     616      128     0.360      89      
sfl:SF3900 ATP-dependent DNA helicase RecQ              K03654     611      128     0.390      82      
ecs:ECs_4527 ATP-dependent DNA helicase                 K03655     693      128     0.192      390     
ece:Z5078 DNA helicase, resolution of Holliday junction K03655     704      128     0.192      390     
sme:SMc02237 Putative ATP-dependent helicase            K03724     849      126     0.247      174     
vch:VC_2564 ATP-dependent RNA helicase DbpA             K05591     460      125     0.196      321     
cro:ROD_39321 ATP-dependent DNA helicase                K03654     609      124     0.378      82      
avn:Avin_20630 MoaA, NifB, PqqE, radical SAM superfamil            377      119     0.215      247     
ag:CAA75080 3-hydroxy-2-methylquinolin-4-one 2,4-dioxyg K21821     276      117     0.311      90      
bmf:BAB1_0554 IS5 family element, transposase orfA                 122      103     0.287      94      
bms:BR0530 IS5 family element, transposase orfA                    122      103     0.287      94      
bme:BMEI1403 transposase                                           122      103     0.287      94      

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