KEGG   PATHWAY: uar04620
Entry
uar04620                    Pathway                                
Name
Toll-like receptor signaling pathway - Ursus americanus (American black bear)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
uar04620  Toll-like receptor signaling pathway
uar04620

Organism
Ursus americanus (American black bear) [GN:uar]
Gene
123775413  TLR1; toll-like receptor 1 [KO:K05398]
123775465  IRF7; interferon regulatory factor 7 [KO:K09447]
123775484  [KO:K05402]
123776209  MAPK13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
123776212  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
123776252  IRF3; interferon regulatory factor 3 isoform X1 [KO:K05411]
123776927  [KO:K05408]
123776933  CCL5; C-C motif chemokine 5 [KO:K12499]
123776969  [KO:K05408]
123776974  [KO:K12964]
123777065  [KO:K05408]
123777544  MAP2K7; dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
123777576  TYK2; non-receptor tyrosine-protein kinase TYK2 isoform X1 [KO:K11219] [EC:2.7.10.2]
123778302  RELA; transcription factor p65 [KO:K04735]
123778464  FADD; FAS-associated death domain protein [KO:K02373]
123779078  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
123779266  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
123779716  MAP2K3; dual specificity mitogen-activated protein kinase kinase 3 [KO:K04432] [EC:2.7.12.2]
123779926  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
123780295  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
123780921  TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403]
123781031  IFNB1; interferon beta [KO:K05415]
123781241  [KO:K05414]
123781249  [KO:K05414]
123781251  [KO:K05414]
123781252  [KO:K05414]
123781255  [KO:K05414]
123781256  [KO:K05414]
123781260  [KO:K05414]
123781283  [KO:K05414]
123781329  [KO:K05414]
123784031  CD80; T-lymphocyte activation antigen CD80 [KO:K05412]
123784096  AKT2; RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
123784206  IFNAR1; interferon alpha/beta receptor 1 isoform X1 [KO:K05130]
123784495  TLR3; toll-like receptor 3 [KO:K05401]
123784602  MAPK3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
123785662  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
123786407  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
123786491  TLR7; LOW QUALITY PROTEIN: toll-like receptor 7 [KO:K05404]
123787173  TBK1; serine/threonine-protein kinase TBK1 isoform X1 [KO:K05410] [EC:2.7.11.10]
123787241  CXCL9; C-X-C motif chemokine 9 [KO:K05416]
123787247  STAT2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221]
123787268  CXCL10; C-X-C motif chemokine 10 [KO:K12671]
123787275  CXCL11; C-X-C motif chemokine 11 [KO:K12672]
123787737  CTSK; cathepsin K [KO:K01371] [EC:3.4.22.38]
123788027  TLR4; toll-like receptor 4 [KO:K10160]
123788054  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
123788294  SPP1; osteopontin isoform X1 [KO:K06250]
123788422  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
123788629  IL12B; interleukin-12 subunit beta [KO:K05425]
123788681  IL6; interleukin-6 [KO:K05405]
123788912  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
123788973  IRF5; interferon regulatory factor 5 isoform X1 [KO:K09446]
123789115  CXCL8; interleukin-8 [KO:K10030]
123790266  CD14; monocyte differentiation antigen CD14 isoform X1 [KO:K04391]
123790445  [KO:K05409]
123790496  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
123791076  TNF; tumor necrosis factor [KO:K03156]
123791373  AKT3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
123791737  [KO:K07210]
123792070  TLR5; toll-like receptor 5 [KO:K10168]
123792071  MAP2K4; dual specificity mitogen-activated protein kinase kinase 4 isoform X1 [KO:K04430] [EC:2.7.12.2]
123792727  [KO:K05403]
123792836  MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729]
123793207  TLR2; toll-like receptor 2 [KO:K10159]
123793473  AKT1; RAC-alpha serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
123793748  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
123793902  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
123794834  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
123795350  JAK1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
123795376  JUN; transcription factor AP-1 [KO:K04448]
123795639  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
123795756  IRF9; LOW QUALITY PROTEIN: interferon regulatory factor 9 [KO:K04693]
123795860  CHUK; LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
123796366  TLR8; toll-like receptor 8 [KO:K10170]
123796797  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
123796818  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 [KO:K04369] [EC:2.7.12.2]
123796979  [KO:K05399]
123796980  [KO:K05399]
123797062  CD40; tumor necrosis factor receptor superfamily member 5 isoform X1 [KO:K03160]
123797428  TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404]
123798145  STAT1; signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220]
123798200  CASP8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
123798551  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
123798725  [KO:K10161]
123798968  FOS; proto-oncogene c-Fos [KO:K04379]
123799411  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
123799741  IL1B; interleukin-1 beta [KO:K04519]
123800228  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
123800287  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
123800464  LY96; lymphocyte antigen 96 [KO:K05400]
123800861  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 isoform X1 [KO:K04368] [EC:2.7.12.2]
123801512  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
123801580  IL12A; interleukin-12 subunit alpha [KO:K05406]
123802090  CD86; T-lymphocyte activation antigen CD86 isoform X1 [KO:K05413]
123802264  MAP3K8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
123802589  RAC1; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
123803240  MAP2K6; dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
123803776  MAPK12; mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
123803793  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
123804286  TLR6; toll-like receptor 6 [KO:K10169]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
uar04010  MAPK signaling pathway
uar04060  Cytokine-cytokine receptor interaction
uar04064  NF-kappa B signaling pathway
uar04120  Ubiquitin mediated proteolysis
uar04151  PI3K-Akt signaling pathway
uar04210  Apoptosis
uar04610  Complement and coagulation cascades
uar04630  JAK-STAT signaling pathway
KO pathway
ko04620   

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